RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 TXNDC9O14530 226 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 TNPO2O14787 897 aaKnown RBP10.53□□□□□ -0.72
SNX13-203ENST00000428135 FCER1AP12319 257 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 PPFIA1Q13136 1202 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 PRPSAP1Q14558 356 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 QRICH1Q2TAL8 776 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 CCDC62Q6P9F0 684 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 EXOC8Q8IYI6 725 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 MTRQ99707 1265 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 ISCA1Q9BUE6 129 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 MKRN1Q9UHC7 482 aaKnown RBP10.53□□□□□ -0.72
SNX13-203ENST00000428135 FKBP3Q00688 224 aaKnown RBP10.53□□□□□ -0.72
SNX13-203ENST00000428135 KCTD16Q68DU8 428 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 DARS2Q6PI48 645 aaKnown RBP10.53□□□□□ -0.72
SNX13-203ENST00000428135 SFR1Q86XK3 245 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 PDCD6IPQ8WUM4 868 aaKnown RBP10.53□□□□□ -0.72
SNX13-203ENST00000428135 GSDMAQ96QA5 445 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 NGRNQ9NPE2 291 aaKnown RBP10.53□□□□□ -0.72
SNX13-203ENST00000428135 PYCARDQ9ULZ3 195 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 MST1RQ04912 1400 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 PREX1Q8TCU6 1659 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 CLDN3O15551 220 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 OAS2P29728 719 aaKnown RBP10.53□□□□□ -0.72
SNX13-203ENST00000428135 SAAL1Q96ER3 474 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 ZNF302Q9NR11 478 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 TRPM1Q7Z4N2 1603 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 UBE2Q2LH0YL09 131 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 GCLMP48507 274 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 C2orf54Q08AI8 447 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 TOB2Q14106 344 aaPredicted RBP10.53□□□□□ -0.72
SNX13-203ENST00000428135 TAF1CQ15572 869 aaPredicted RBP10.53□□□□□ -0.72
SNX13-203ENST00000428135 HS1BP3Q53T59 392 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 RCSD1Q6JBY9 416 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 RMDN2Q96LZ7 410 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 MED14O60244 1454 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 SLFN14P0C7P3 912 aa10.52□□□□□ -0.72
SNX13-203ENST00000428135 CYP2B6P20813 491 aa10.52□□□□□ -0.72
SNX13-203ENST00000428135 TUBB4BP68371 445 aa10.52□□□□□ -0.72
SNX13-203ENST00000428135 PPP6R3Q5H9R7 873 aaPredicted RBP10.52□□□□□ -0.72
SNX13-203ENST00000428135 RUFY4Q6ZNE9 571 aa10.52□□□□□ -0.72
SNX13-203ENST00000428135 PNMA8AQ86V59 439 aaPredicted RBP10.52□□□□□ -0.72
SNX13-203ENST00000428135 CFAP36Q96G28 342 aa10.52□□□□□ -0.72
SNX13-203ENST00000428135 TDP2O95551 362 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 LMNB1P20700 586 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 EPHB1P54762 984 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 MAN2A1Q16706 1144 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 LMBRD2Q68DH5 695 aaPredicted RBP10.52□□□□□ -0.73
SNX13-203ENST00000428135 GAS2L3Q86XJ1 694 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 RPUSD2Q8IZ73 545 aaKnown RBP10.52□□□□□ -0.73
SNX13-203ENST00000428135 GCNAQ96QF7 691 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 PPME1Q9Y570 386 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 SRPRBQ9Y5M8 271 aaKnown RBP10.52□□□□□ -0.73
SNX13-203ENST00000428135 USP42Q9H9J4 1324 aaKnown RBP10.52□□□□□ -0.73
SNX13-203ENST00000428135 LRRD1A4D1F6 860 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 MAP1SQ66K74 1059 aaPredicted RBP10.52□□□□□ -0.73
SNX13-203ENST00000428135 CCDC51Q96ER9 411 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 DHTKD1Q96HY7 919 aaPredicted RBP10.52□□□□□ -0.73
SNX13-203ENST00000428135 TBK1Q9UHD2 729 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 MYO3BQ8WXR4 1341 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 COPB2P35606 906 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 KIF11P52732 1056 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 SH2D4BQ5SQS7 431 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 PADI6Q6TGC4 694 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 GRK7Q8WTQ7 553 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 LMCD1Q9NZU5 365 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 SLC12A6Q9UHW9 1150 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 NPHP3-ACAD11A0A0J9YXS1 232 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 ZNF233A6NK53 670 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 GSG1L2A8MUP6 293 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 ATP1A3P13637 1013 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 PHBP35232 272 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 EIF4A3P38919 411 aaKnown RBP10.52□□□□□ -0.73
SNX13-203ENST00000428135 PRELPP51888 382 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 ARHGAP4P98171 946 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 PDE1BQ01064 536 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 RESTQ13127 1097 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 INTS5Q6P9B9 1019 aaKnown RBP10.52□□□□□ -0.73
SNX13-203ENST00000428135 GLYCTKQ8IVS8 523 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 MAP7D3Q8IWC1 876 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 NSUN6Q8TEA1 469 aaKnown RBP10.52□□□□□ -0.73
SNX13-203ENST00000428135 AP1M1Q9BXS5 423 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 FEZ2Q9UHY8 353 aaPredicted RBP10.52□□□□□ -0.73
SNX13-203ENST00000428135 MYO3AQ8NEV4 1616 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 USP31Q70CQ4 1352 aa10.52□□□□□ -0.73
SNX13-203ENST00000428135 KLRK1P26718 216 aa10.51□□□□□ -0.73
SNX13-203ENST00000428135 BPIFB4P59827 614 aa10.51□□□□□ -0.73
SNX13-203ENST00000428135 SGO2Q562F6 1265 aa10.51□□□□□ -0.73
SNX13-203ENST00000428135 CDC26Q8NHZ8 85 aa10.51□□□□□ -0.73
SNX13-203ENST00000428135 AFG1LQ8WV93 481 aa10.51□□□□□ -0.73
SNX13-203ENST00000428135 EXT2Q93063 718 aa10.51□□□□□ -0.73
SNX13-203ENST00000428135 TRIM56Q9BRZ2 755 aaKnown RBP10.51□□□□□ -0.73
SNX13-203ENST00000428135 TMEM39BQ9GZU3 492 aa10.51□□□□□ -0.73
SNX13-203ENST00000428135 ATP6V0A4Q9HBG4 840 aa10.51□□□□□ -0.73
SNX13-203ENST00000428135 LY9Q9HBG7 655 aa10.51□□□□□ -0.73
SNX13-203ENST00000428135 IFNAR2P48551 515 aa10.51□□□□□ -0.73
SNX13-203ENST00000428135 ANKRD20A3Q5VUR7 823 aa10.51□□□□□ -0.73
SNX13-203ENST00000428135 MIS12Q9H081 205 aa10.51□□□□□ -0.73
SNX13-203ENST00000428135 ARL4AP40617 200 aa10.51□□□□□ -0.73
SNX13-203ENST00000428135 LIFRP42702 1097 aa10.51□□□□□ -0.73
SNX13-203ENST00000428135 TTLL4Q14679 1199 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms