RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 RSPH10BP0C881 870 aa18.85■□□□□ 0.61
VRK2-204ENST00000428021 FAM26DQ5JW98 314 aa18.85■□□□□ 0.61
VRK2-204ENST00000428021 TAF2Q6P1X5 1199 aa18.85■□□□□ 0.61
VRK2-204ENST00000428021 HAS1Q92839 578 aa18.85■□□□□ 0.61
VRK2-204ENST00000428021 TCEAL9Q9UHQ7 104 aa18.85■□□□□ 0.61
VRK2-204ENST00000428021 ZNF862O60290 1169 aa18.84■□□□□ 0.61
VRK2-204ENST00000428021 SFNP31947 248 aa18.84■□□□□ 0.61
VRK2-204ENST00000428021 MCM2P49736 904 aa18.84■□□□□ 0.61
VRK2-204ENST00000428021 UGCGQ16739 394 aa18.84■□□□□ 0.61
VRK2-204ENST00000428021 Q7L0L9 218 aa18.84■□□□□ 0.61
VRK2-204ENST00000428021 POTEDQ86YR6 584 aa18.84■□□□□ 0.61
VRK2-204ENST00000428021 FAM184AQ8NB25 1140 aa18.84■□□□□ 0.61
VRK2-204ENST00000428021 RDM1Q8NG50 284 aa18.84■□□□□ 0.61
VRK2-204ENST00000428021 TNPO1Q92973 898 aaKnown RBP18.84■□□□□ 0.61
VRK2-204ENST00000428021 FAM20AQ96MK3 541 aa18.84■□□□□ 0.61
VRK2-204ENST00000428021 NAP1L4Q99733 375 aaKnown RBP18.84■□□□□ 0.61
VRK2-204ENST00000428021 MTIF3Q9H2K0 278 aaKnown RBP18.84■□□□□ 0.61
VRK2-204ENST00000428021 VAV3Q9UKW4 847 aa18.84■□□□□ 0.61
VRK2-204ENST00000428021 SAMM50Q9Y512 469 aa18.84■□□□□ 0.61
VRK2-204ENST00000428021 CHD9Q3L8U1 2897 aa18.83■□□□□ 0.6
VRK2-204ENST00000428021 TBX3O15119 743 aa18.83■□□□□ 0.6
VRK2-204ENST00000428021 CHRNA1P02708 482 aa18.83■□□□□ 0.6
VRK2-204ENST00000428021 CTSHP09668 335 aa18.83■□□□□ 0.6
VRK2-204ENST00000428021 JAK3P52333 1124 aa18.83■□□□□ 0.6
VRK2-204ENST00000428021 SAFBQ15424 915 aaKnown RBP eCLIP18.83■□□□□ 0.6
VRK2-204ENST00000428021 MIER3Q7Z3K6 550 aa18.83■□□□□ 0.6
VRK2-204ENST00000428021 DNAJB3Q8WWF6 145 aa18.83■□□□□ 0.6
VRK2-204ENST00000428021 PCDHA2Q9Y5H9 948 aa18.83■□□□□ 0.6
VRK2-204ENST00000428021 SLC4A7Q9Y6M7 1214 aa18.83■□□□□ 0.6
VRK2-204ENST00000428021 COL1A2P08123 1366 aa18.82■□□□□ 0.6
VRK2-204ENST00000428021 SIP14410 1827 aa18.82■□□□□ 0.6
VRK2-204ENST00000428021 ZBBXA8MT70 800 aa18.82■□□□□ 0.6
VRK2-204ENST00000428021 EML1O00423 815 aa18.82■□□□□ 0.6
VRK2-204ENST00000428021 ACTN1P12814 892 aa18.82■□□□□ 0.6
VRK2-204ENST00000428021 KLRC1P26715 233 aa18.82■□□□□ 0.6
VRK2-204ENST00000428021 PBX2P40425 430 aa18.82■□□□□ 0.6
VRK2-204ENST00000428021 MGAT3Q09327 533 aa18.82■□□□□ 0.6
VRK2-204ENST00000428021 PPP2R5CQ13362 524 aa18.82■□□□□ 0.6
VRK2-204ENST00000428021 ZNF484Q5JVG2 852 aa18.82■□□□□ 0.6
VRK2-204ENST00000428021 CNKSR3Q6P9H4 555 aa18.82■□□□□ 0.6
VRK2-204ENST00000428021 MTHFD1LQ6UB35 978 aa18.82■□□□□ 0.6
VRK2-204ENST00000428021 CKAP2LQ8IYA6 745 aa18.82■□□□□ 0.6
VRK2-204ENST00000428021 DEFB123Q8N688 67 aa18.82■□□□□ 0.6
VRK2-204ENST00000428021 BBXQ8WY36 941 aaPredicted RBP18.82■□□□□ 0.6
VRK2-204ENST00000428021 FOXP1Q9H334 677 aaPredicted RBP18.82■□□□□ 0.6
VRK2-204ENST00000428021 EVPLQ92817 2033 aa18.81■□□□□ 0.6
VRK2-204ENST00000428021 BAIAP3O94812 1187 aa18.81■□□□□ 0.6
VRK2-204ENST00000428021 STBD1O95210 358 aa18.81■□□□□ 0.6
VRK2-204ENST00000428021 PLEKHG4Q58EX7 1191 aa18.81■□□□□ 0.6
VRK2-204ENST00000428021 TRMT1LQ7Z2T5 733 aaKnown RBP18.81■□□□□ 0.6
VRK2-204ENST00000428021 DBF4BQ8NFT6 615 aa18.81■□□□□ 0.6
VRK2-204ENST00000428021 PBX4Q9BYU1 374 aa18.81■□□□□ 0.6
VRK2-204ENST00000428021 FAM49AQ9H0Q0 323 aaPredicted RBP18.81■□□□□ 0.6
VRK2-204ENST00000428021 GBF1Q92538 1859 aa18.81■□□□□ 0.6
VRK2-204ENST00000428021 PTPRSQ13332 1948 aa18.8■□□□□ 0.6
VRK2-204ENST00000428021 SMIM35A0A1B0GVV1 85 aa18.8■□□□□ 0.6
VRK2-204ENST00000428021 KIF28PB7ZC32 967 aa18.8■□□□□ 0.6
VRK2-204ENST00000428021 DNAJB2P25686 324 aa18.8■□□□□ 0.6
VRK2-204ENST00000428021 PRKCEQ02156 737 aa18.8■□□□□ 0.6
VRK2-204ENST00000428021 SPIRE1Q08AE8 756 aa18.8■□□□□ 0.6
VRK2-204ENST00000428021 MKRN4PQ13434 485 aaPredicted RBP18.8■□□□□ 0.6
VRK2-204ENST00000428021 RSPH3Q86UC2 560 aa18.8■□□□□ 0.6
VRK2-204ENST00000428021 TTYH1Q9H313 450 aaPredicted RBP18.8■□□□□ 0.6
VRK2-204ENST00000428021 MTMR10Q9NXD2 777 aa18.8■□□□□ 0.6
VRK2-204ENST00000428021 C22orf31O95567 290 aa18.79■□□□□ 0.6
VRK2-204ENST00000428021 OATP04181 439 aa18.79■□□□□ 0.6
VRK2-204ENST00000428021 ATP2A2P16615 1042 aaKnown RBP18.79■□□□□ 0.6
VRK2-204ENST00000428021 WDR5P61964 334 aaKnown RBP18.79■□□□□ 0.6
VRK2-204ENST00000428021 MRPS6P82932 125 aaKnown RBP18.79■□□□□ 0.6
VRK2-204ENST00000428021 KIAA0319LQ8IZA0 1049 aa18.79■□□□□ 0.6
VRK2-204ENST00000428021 FAM167AQ96KS9 214 aa18.79■□□□□ 0.6
VRK2-204ENST00000428021 MTMR9Q96QG7 549 aa18.79■□□□□ 0.6
VRK2-204ENST00000428021 CDY2AQ9Y6F7 541 aa18.79■□□□□ 0.6
VRK2-204ENST00000428021 ABHD14A-ACY1A0A1B0GW23 586 aa18.78■□□□□ 0.6
VRK2-204ENST00000428021 BAG4O95429 457 aaKnown RBP18.78■□□□□ 0.6
VRK2-204ENST00000428021 RPLP2P05387 115 aaKnown RBP18.78■□□□□ 0.6
VRK2-204ENST00000428021 U2AF2P26368 475 aaKnown RBP eCLIP18.78■□□□□ 0.6
VRK2-204ENST00000428021 GJB2P29033 226 aa18.78■□□□□ 0.6
VRK2-204ENST00000428021 RABGGTBP53611 331 aa18.78■□□□□ 0.6
VRK2-204ENST00000428021 LPIN1Q14693 890 aa18.78■□□□□ 0.6
VRK2-204ENST00000428021 CALCRLQ16602 461 aa18.78■□□□□ 0.6
VRK2-204ENST00000428021 NOSTRINQ8IVI9 506 aa18.78■□□□□ 0.6
VRK2-204ENST00000428021 SLFN12Q8IYM2 578 aa18.78■□□□□ 0.6
VRK2-204ENST00000428021 BANK1Q8NDB2 785 aa18.78■□□□□ 0.6
VRK2-204ENST00000428021 PHOSPHO2Q8TCD6 241 aa18.78■□□□□ 0.6
VRK2-204ENST00000428021 TMEM60Q9H2L4 133 aa18.78■□□□□ 0.6
VRK2-204ENST00000428021 SEMA6BQ9H3T3 888 aa18.78■□□□□ 0.6
VRK2-204ENST00000428021 NRBP2Q9NSY0 501 aa18.78■□□□□ 0.6
VRK2-204ENST00000428021 YBX2Q9Y2T7 364 aaKnown RBP18.78■□□□□ 0.6
VRK2-204ENST00000428021 MICAL3Q7RTP6 2002 aa18.78■□□□□ 0.6
VRK2-204ENST00000428021 LOXHD1Q8IVV2 1947 aa18.77■□□□□ 0.6
VRK2-204ENST00000428021 MARCH6O60337 910 aa18.77■□□□□ 0.6
VRK2-204ENST00000428021 NEMFO60524 1076 aa18.77■□□□□ 0.6
VRK2-204ENST00000428021 ATP2B1P20020 1258 aa18.77■□□□□ 0.6
VRK2-204ENST00000428021 DEFB103AP81534 67 aa18.77■□□□□ 0.6
VRK2-204ENST00000428021 TMEM62Q0P6H9 643 aa18.77■□□□□ 0.6
VRK2-204ENST00000428021 CUL4AQ13619 759 aa18.77■□□□□ 0.6
VRK2-204ENST00000428021 IKBKEQ14164 716 aa18.77■□□□□ 0.6
VRK2-204ENST00000428021 TARBP2Q15633 366 aaKnown RBP18.77■□□□□ 0.6
VRK2-204ENST00000428021 FBXO47Q5MNV8 452 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms