RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 C9orf50Q5SZB4 431 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 ZNF365Q70YC5 407 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 SLFN12Q8IYM2 578 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 ETNPPLQ8TBG4 499 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 LMBR1Q8WVP7 490 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 RSPH1Q8WYR4 309 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 GLG1Q92896 1179 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 PCYT2Q99447 389 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 ALG1Q9BT22 464 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 PPP1R12CQ9BZL4 782 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 FOXP1Q9H334 677 aaPredicted RBP10.34□□□□□ -0.75
SMC1A-203ENST00000428014 KCNMB3Q9NPA1 279 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 TMEM260Q9NX78 707 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 PCDHA2Q9Y5H9 948 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 MYH9P35579 1960 aaKnown RBP10.34□□□□□ -0.75
SMC1A-203ENST00000428014 MSH4O15457 936 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 CCNE2O96020 404 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 KRT2P35908 639 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 PPFIA1Q13136 1202 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 STK3Q13188 491 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 PPP2R5CQ13362 524 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 TRIM29Q14134 588 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 GPNMBQ14956 572 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 PRR16Q569H4 304 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 ODR4Q5SWX8 454 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 FBXO18Q8NFZ0 1043 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 TEKT3Q9BXF9 490 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 BCAS3Q9H6U6 928 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 TUBE1Q9UJT0 475 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 PCDHA11Q9Y5I1 949 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 SLC4A7Q9Y6M7 1214 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 SZT2Q5T011 3432 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 TET1Q8NFU7 2136 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 UMODL1Q5DID0 1318 aa10.33□□□□□ -0.76
SMC1A-203ENST00000428014 POTEB3A0JP26 581 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 RSPH10B2B2RC85 870 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 SOX1O00570 391 aaPredicted RBP10.32□□□□□ -0.76
SMC1A-203ENST00000428014 RSPH10BP0C881 870 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 PDIA4P13667 645 aaKnown RBP10.32□□□□□ -0.76
SMC1A-203ENST00000428014 MUTP22033 750 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 CCL23P55773 120 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 IKBKEQ14164 716 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 PLCB4Q15147 1175 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 SAFBQ15424 915 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMC1A-203ENST00000428014 GRIK4Q16099 956 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 PLEKHG4Q58EX7 1191 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 MARCH8Q5T0T0 291 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 ZNF697Q5TEC3 545 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 IER5Q5VY09 327 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 POTEBQ6S5H4 581 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 KCTD17Q8N5Z5 321 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 NEK9Q8TD19 979 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 JPH2Q9BR39 696 aaPredicted RBP10.32□□□□□ -0.76
SMC1A-203ENST00000428014 FTHL17Q9BXU8 183 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 ZNF302Q9NR11 478 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 DISC1Q9NRI5 854 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 MTMR10Q9NXD2 777 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 STXBP5LQ9Y2K9 1186 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 DOCK5Q9H7D0 1870 aa10.32□□□□□ -0.76
SMC1A-203ENST00000428014 LAMA2P24043 3122 aaKnown RBP10.31□□□□□ -0.76
SMC1A-203ENST00000428014 KIF28PB7ZC32 967 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 TREHO43280 583 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 GAS2O43903 313 aaKnown RBP10.31□□□□□ -0.76
SMC1A-203ENST00000428014 GAS7O60861 476 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 LYPLA2O95372 231 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 INSRRP14616 1297 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 POU3F3P20264 500 aaPredicted RBP10.31□□□□□ -0.76
SMC1A-203ENST00000428014 U2AF2P26368 475 aaKnown RBP eCLIP10.31□□□□□ -0.76
SMC1A-203ENST00000428014 MGAT3Q09327 533 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 HIC1Q14526 733 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 ZNF618Q5T7W0 954 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 LRCH2Q5VUJ6 765 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 TRIM50Q86XT4 487 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 CCDC60Q8IWA6 550 aaPredicted RBP10.31□□□□□ -0.76
SMC1A-203ENST00000428014 PGBD1Q96JS3 809 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 NIFKQ9BYG3 293 aaKnown RBP10.31□□□□□ -0.76
SMC1A-203ENST00000428014 NRBP2Q9NSY0 501 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 SETD4Q9NVD3 440 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 DDX25Q9UHL0 483 aaKnown RBP10.31□□□□□ -0.76
SMC1A-203ENST00000428014 MSRAQ9UJ68 235 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 BOLA1Q9Y3E2 137 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 WDR81Q562E7 1941 aa10.31□□□□□ -0.76
SMC1A-203ENST00000428014 LAD1O00515 517 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 BACH1O14867 736 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 NBNO60934 754 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 BAG4O95429 457 aaKnown RBP10.3□□□□□ -0.76
SMC1A-203ENST00000428014 LARGE1O95461 756 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 XRCC6P12956 609 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMC1A-203ENST00000428014 ATP2A2P16615 1042 aaKnown RBP10.3□□□□□ -0.76
SMC1A-203ENST00000428014 DNAJB2P25686 324 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 TMOD1P28289 359 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 ST3GAL1Q11201 340 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 XKR3Q5GH77 459 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 UTP14CQ5TAP6 766 aaKnown RBP10.3□□□□□ -0.76
SMC1A-203ENST00000428014 KRT40Q6A162 431 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 PDXDC2PQ6P474 469 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 DIS3L2Q8IYB7 885 aaKnown RBP10.3□□□□□ -0.76
SMC1A-203ENST00000428014 LINC01465Q8N7H1 131 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 RASGRP4Q8TDF6 673 aa10.3□□□□□ -0.76
SMC1A-203ENST00000428014 SEPT8Q92599 483 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms