RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 NEDD9Q14511 834 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 LAPTM4AQ15012 233 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 LRRC41Q15345 812 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ZNF174Q15697 407 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 HSDL1Q3SXM5 330 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 METTL7BQ6UX53 244 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 CYFIP1Q7L576 1253 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 GIMAP8Q8ND71 665 aaPredicted RBP7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 GJA10Q969M2 543 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ABHD8Q96I13 439 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 FAM20AQ96MK3 541 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 DEFB118Q96PH6 123 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 RIT2Q99578 217 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ZNF577Q9BSK1 485 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 XPNPEP3Q9NQH7 507 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 NOL7Q9UMY1 257 aaKnown RBP7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 BRCA2P51587 3418 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 SYNRGQ9UMZ2 1314 aa7.99□□□□□ -1.13
CHCHD3P1-201ENST00000425516 NEMFO60524 1076 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 CCNE2O96020 404 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PGK1P00558 417 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 CAPN2P17655 700 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ATP2B1P20020 1258 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 SPIRE1Q08AE8 756 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PTPAQ15257 358 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 FOXD4L5Q5VV16 416 aaPredicted RBP7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TRAF7Q6Q0C0 670 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ABHD15Q6UXT9 468 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TLK2Q86UE8 772 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 DHX37Q8IY37 1157 aaKnown RBP7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 OR6J1Q8NGC5 347 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PPTC7Q8NI37 304 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 U2AF1L4Q8WU68 220 aaKnown RBP7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 AFG1LQ8WV93 481 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 FOXD4L4Q8WXT5 416 aaPredicted RBP7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 UIMC1Q96RL1 719 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 USP28Q96RU2 1077 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 GPR20Q99678 358 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 FTOQ9C0B1 505 aaKnown RBP eCLIP7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 AP5M1Q9H0R1 490 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TBC1D22BQ9NU19 505 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 VAV3Q9UKW4 847 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 CLIC4Q9Y696 253 aa7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 MORC2Q9Y6X9 1032 aaPredicted RBP7.98□□□□□ -1.13
CHCHD3P1-201ENST00000425516 IGKV6D-21A0A0A0MT36 114 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 FAM187AA6NFU0 413 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 LAD1O00515 517 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 SORBS3O60504 671 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PPFIA4O75335 1185 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PRPHP41219 470 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 NASPP49321 788 aaPredicted RBP7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 NUCB2P80303 420 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ATP2C1P98194 919 aaPredicted RBP7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 BEX3Q00994 111 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PPP2R5CQ13362 524 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 SF3A1Q15459 793 aaKnown RBP7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 KCNA10Q16322 511 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 IL17AQ16552 155 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 CALCRLQ16602 461 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 FSCN1Q16658 493 aaKnown RBP7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 LRCH2Q5VUJ6 765 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ATL3Q6DD88 541 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ZNF746Q6NUN9 644 aaPredicted RBP7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 UBE2Q1Q7Z7E8 422 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 SLFN12Q8IYM2 578 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 ARRDC4Q8NCT1 418 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 PCYT2Q99447 389 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TSEN34Q9BSV6 310 aaKnown RBP7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 UNC45AQ9H3U1 944 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 MLXIPQ9HAP2 919 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 JPH1Q9HDC5 661 aaPredicted RBP7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TOR4AQ9NXH8 423 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 TFIP11Q9UBB9 837 aaKnown RBP7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 SLC9A2Q9UBY0 812 aa7.97□□□□□ -1.13
CHCHD3P1-201ENST00000425516 HAS3O00219 553 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 EML1O00423 815 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 DNM1LO00429 736 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 ZBTB24O43167 697 aaPredicted RBP7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 GAS7O60861 476 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 LILRB3O75022 631 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 LGR5O75473 907 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 BAG4O95429 457 aaKnown RBP7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 TFRCP02786 760 aaKnown RBP7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 MMP3P08254 477 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 OR52Z1P0C646 297 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 C6orf222P0C671 652 aaPredicted RBP7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 CCNYL3P0C7X3 344 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 COL6A1P12109 1028 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 EN2P19622 333 aaPredicted RBP7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 TXKP42681 527 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 CPT1AP50416 773 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 ACLYP53396 1101 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 ACTR2P61160 394 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 PURAQ00577 322 aaKnown RBP7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 KRT76Q01546 638 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 PDIA5Q14554 519 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 SLC39A14Q15043 492 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 GNASQ5JWF2 1037 aa7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 ARL6IP4Q66PJ3 421 aaKnown RBP7.96□□□□□ -1.14
CHCHD3P1-201ENST00000425516 RNF180Q86T96 592 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms