RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 DKC1O60832 514 aaKnown RBP eCLIP19.04■□□□□ 0.64
COL7A1-202ENST00000422991 LYPLA2O95372 231 aa19.04■□□□□ 0.64
COL7A1-202ENST00000422991 OATP04181 439 aa19.04■□□□□ 0.64
COL7A1-202ENST00000422991 CCT6AP40227 531 aaKnown RBP19.04■□□□□ 0.64
COL7A1-202ENST00000422991 CHMP4BP1P59074 171 aa19.04■□□□□ 0.64
COL7A1-202ENST00000422991 ITGA7Q13683 1181 aa19.04■□□□□ 0.64
COL7A1-202ENST00000422991 POTEBQ6S5H4 581 aa19.04■□□□□ 0.64
COL7A1-202ENST00000422991 CATSPER3Q86XQ3 398 aa19.04■□□□□ 0.64
COL7A1-202ENST00000422991 C4orf19Q8IY42 314 aa19.04■□□□□ 0.64
COL7A1-202ENST00000422991 ZNF579Q8NAF0 562 aaKnown RBP19.04■□□□□ 0.64
COL7A1-202ENST00000422991 SLC43A3Q8NBI5 491 aa19.04■□□□□ 0.64
COL7A1-202ENST00000422991 ATP8B4Q8TF62 1192 aa19.04■□□□□ 0.64
COL7A1-202ENST00000422991 FAM167AQ96KS9 214 aa19.04■□□□□ 0.64
COL7A1-202ENST00000422991 ZSWIM4Q9H7M6 989 aa19.04■□□□□ 0.64
COL7A1-202ENST00000422991 KAT6AQ92794 2004 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 SLC26A4O43511 780 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 STBD1O95210 358 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 SMIM10L2AP0DMW4 78 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 SMIM10L2BP0DMW5 78 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 MUTP22033 750 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 SNX17Q15036 470 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 SPECC1Q5M775 1068 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 HYIQ5T013 277 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 NFRKBQ6P4R8 1299 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 POTEGQ6S5H5 508 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 USP49Q70CQ1 688 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 CABP7Q86V35 215 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 SESTD1Q86VW0 696 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 TPH2Q8IWU9 490 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 CKAP2LQ8IYA6 745 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 PPP1R13LQ8WUF5 828 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 BBXQ8WY36 941 aaPredicted RBP19.03■□□□□ 0.64
COL7A1-202ENST00000422991 SYMPKQ92797 1274 aaKnown RBP19.03■□□□□ 0.64
COL7A1-202ENST00000422991 EPSTI1Q96J88 318 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 TRPC6Q9Y210 931 aa19.03■□□□□ 0.64
COL7A1-202ENST00000422991 KDM3AQ9Y4C1 1321 aa19.02■□□□□ 0.64
COL7A1-202ENST00000422991 ARVCFO00192 962 aa19.02■□□□□ 0.64
COL7A1-202ENST00000422991 HOXC8P31273 242 aa19.02■□□□□ 0.64
COL7A1-202ENST00000422991 UBA7P41226 1012 aa19.02■□□□□ 0.64
COL7A1-202ENST00000422991 ECM1Q16610 540 aa19.02■□□□□ 0.64
COL7A1-202ENST00000422991 XKR3Q5GH77 459 aa19.02■□□□□ 0.64
COL7A1-202ENST00000422991 SLC39A5Q6ZMH5 540 aa19.02■□□□□ 0.64
COL7A1-202ENST00000422991 CLEC17AQ6ZS10 378 aa19.02■□□□□ 0.64
COL7A1-202ENST00000422991 C7orf31Q8N865 590 aa19.02■□□□□ 0.64
COL7A1-202ENST00000422991 SEZ6LQ9BYH1 1024 aa19.02■□□□□ 0.64
COL7A1-202ENST00000422991 CCSER1Q9C0I3 900 aa19.02■□□□□ 0.64
COL7A1-202ENST00000422991 HDAC6Q9UBN7 1215 aa19.02■□□□□ 0.64
COL7A1-202ENST00000422991 TRIP12Q14669 1992 aaPredicted RBP19.01■□□□□ 0.63
COL7A1-202ENST00000422991 ZBTB42B2RXF5 422 aa19.01■□□□□ 0.63
COL7A1-202ENST00000422991 HBP1O60381 514 aa19.01■□□□□ 0.63
COL7A1-202ENST00000422991 CDK7P50613 346 aa19.01■□□□□ 0.63
COL7A1-202ENST00000422991 ATN1P54259 1190 aaPredicted RBP19.01■□□□□ 0.63
COL7A1-202ENST00000422991 PTPN11Q06124 597 aaPredicted RBP19.01■□□□□ 0.63
COL7A1-202ENST00000422991 PPFIA1Q13136 1202 aa19.01■□□□□ 0.63
COL7A1-202ENST00000422991 GRB10Q13322 594 aa19.01■□□□□ 0.63
COL7A1-202ENST00000422991 TMEM119Q4V9L6 283 aa19.01■□□□□ 0.63
COL7A1-202ENST00000422991 C1orf53Q5VUE5 145 aa19.01■□□□□ 0.63
COL7A1-202ENST00000422991 SHC4Q6S5L8 630 aa19.01■□□□□ 0.63
COL7A1-202ENST00000422991 ANO5Q75V66 913 aa19.01■□□□□ 0.63
COL7A1-202ENST00000422991 DPF3Q92784 378 aa19.01■□□□□ 0.63
COL7A1-202ENST00000422991 PNMA5Q96PV4 448 aa19.01■□□□□ 0.63
COL7A1-202ENST00000422991 SEPT9Q9UHD8 586 aaPredicted RBP19.01■□□□□ 0.63
COL7A1-202ENST00000422991 GTF2IRD1Q9UHL9 959 aa19.01■□□□□ 0.63
COL7A1-202ENST00000422991 COL1A2P08123 1366 aa19.01■□□□□ 0.63
COL7A1-202ENST00000422991 TMEM150BA6NC51 233 aa19■□□□□ 0.63
COL7A1-202ENST00000422991 DDX11L8A8MPP1 907 aa19■□□□□ 0.63
COL7A1-202ENST00000422991 INSRRP14616 1297 aa19■□□□□ 0.63
COL7A1-202ENST00000422991 YWHABP31946 246 aaKnown RBP19■□□□□ 0.63
COL7A1-202ENST00000422991 TXLNAP40222 546 aa19■□□□□ 0.63
COL7A1-202ENST00000422991 KARSQ15046 597 aaKnown RBP19■□□□□ 0.63
COL7A1-202ENST00000422991 GRIK4Q16099 956 aa19■□□□□ 0.63
COL7A1-202ENST00000422991 FAM47CQ5HY64 1035 aa19■□□□□ 0.63
COL7A1-202ENST00000422991 RESP18Q5W5W9 173 aa19■□□□□ 0.63
COL7A1-202ENST00000422991 ADALQ6DHV7 355 aa19■□□□□ 0.63
COL7A1-202ENST00000422991 TRMT1LQ7Z2T5 733 aaKnown RBP19■□□□□ 0.63
COL7A1-202ENST00000422991 LMBR1Q8WVP7 490 aa19■□□□□ 0.63
COL7A1-202ENST00000422991 NIFKQ9BYG3 293 aaKnown RBP19■□□□□ 0.63
COL7A1-202ENST00000422991 NT5C3AQ9H0P0 336 aa19■□□□□ 0.63
COL7A1-202ENST00000422991 NRBP2Q9NSY0 501 aa19■□□□□ 0.63
COL7A1-202ENST00000422991 DDX19AQ9NUU7 478 aaKnown RBP19■□□□□ 0.63
COL7A1-202ENST00000422991 KIAA1024Q9UPX6 916 aa19■□□□□ 0.63
COL7A1-202ENST00000422991 NRCAMQ92823 1304 aa19■□□□□ 0.63
COL7A1-202ENST00000422991 C17orf102A2RUQ5 167 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 ZBTB39O15060 712 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 HIC1Q14526 733 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 ZRSR1Q15695 479 aaKnown RBP18.99■□□□□ 0.63
COL7A1-202ENST00000422991 CSPP1Q1MSJ5 1256 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 LRRC26Q2I0M4 334 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 ZNF484Q5JVG2 852 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 PLA2G4FQ68DD2 849 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 GDF6Q6KF10 455 aaPredicted RBP18.99■□□□□ 0.63
COL7A1-202ENST00000422991 TMEM87AQ8NBN3 555 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 PIGOQ8TEQ8 1089 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 CALML4Q96GE6 196 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 CDK5RAP3Q96JB5 506 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 NACC1Q96RE7 527 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 ANKEF1Q9NU02 776 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 SETD4Q9NVD3 440 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 MROH7Q68CQ1 1323 aa18.99■□□□□ 0.63
COL7A1-202ENST00000422991 A0A1W2PQ27 194 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms