RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 SEL1LQ9UBV2 794 aa14.85□□□□□ -0.03
TMEM50B-201ENST00000420455 BTBD19C9JJ37 291 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 COPB1P53618 953 aaKnown RBP14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 PSMC5P62195 406 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 NCAPG2Q86XI2 1143 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 COL4A3BPQ9Y5P4 624 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 CELF2O95319 508 aaKnown RBP14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 SSBP05455 408 aaKnown RBP eCLIP14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 HOXD13P35453 343 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 KCNJ6P48051 423 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 SP2Q02086 613 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 TPD52L1Q16890 204 aaPredicted RBP14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 DNTTIP2Q5QJE6 756 aaKnown RBP14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 ABHD15Q6UXT9 468 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 CSGALNACT2Q8N6G5 542 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 TRIM47Q96LD4 638 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 TIPINQ9BVW5 301 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 ANKEF1Q9NU02 776 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 POTEB2H3BUK9 544 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 DDX39AO00148 427 aaKnown RBP14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 PDHXO00330 501 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 MARSP56192 900 aaKnown RBP14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 MAPK7Q13164 816 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 UGCGQ16739 394 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 HERC4Q5GLZ8 1057 aaPredicted RBP14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 CEP135Q66GS9 1140 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 PPP4R3CPQ6ZMV5 832 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 PAGR1Q9BTK6 254 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 TRAF3IP3Q9Y228 551 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 PCDHA10Q9Y5I2 948 aa14.84□□□□□ -0.03
TMEM50B-201ENST00000420455 PLXNA1Q9UIW2 1896 aa14.83□□□□□ -0.03
TMEM50B-201ENST00000420455 IGKV6D-21A0A0A0MT36 114 aa14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 EIF3DO15371 548 aaKnown RBP eCLIP14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 KIF20AO95235 890 aa14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 RARRES1P49788 294 aa14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 NFIL3Q16649 462 aa14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 FAM114A1Q8IWE2 563 aa14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 TMEM174Q8WUU8 243 aa14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 UBE4BO95155 1302 aa14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 TGFB3P10600 412 aa14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 MAPTP10636 758 aaKnown RBP14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 EDRF1Q3B7T1 1238 aa14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 SFR1Q86XK3 245 aa14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 ABRAQ8N0Z2 381 aa14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 JPH1Q9HDC5 661 aaPredicted RBP14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 NMRK2Q9NPI5 230 aa14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 PKD2L1Q9P0L9 805 aa14.83□□□□□ -0.04
TMEM50B-201ENST00000420455 CCL15-CCL14A0A0B4J2E2 113 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 RSPH10B2B2RC85 870 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 RSPH10BP0C881 870 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 GCLCP48506 637 aaPredicted RBP14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 CACNB1Q02641 598 aaPredicted RBP14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 CCL15Q16663 113 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 CHADLQ6NUI6 762 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 DAW1Q8N136 415 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 CEP63Q96MT8 703 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 ZNF408Q9H9D4 720 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 TRMT1Q9NXH9 659 aaKnown RBP14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 SLC9A2Q9UBY0 812 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 IGSF9BQ9UPX0 1349 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 A0A1W2PQC6 194 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 LGALS16A8MUM7 142 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 YWHABP31946 246 aaKnown RBP14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 CASP5P51878 434 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 LRRC41Q15345 812 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 MIIPQ5JXC2 388 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 BCAS3Q9H6U6 928 aa14.82□□□□□ -0.04
TMEM50B-201ENST00000420455 NKRFO15226 690 aaKnown RBP eCLIP14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 KRT18P05783 430 aaKnown RBP14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 CYP2C8P10632 490 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 ADKP55263 362 aaKnown RBP14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 FILIP1LQ4L180 1135 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 GPRC5AQ8NFJ5 357 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 MMP19Q99542 508 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 PTPN18Q99952 460 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 ZCCHC17Q9NP64 241 aaKnown RBP14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 ADGRA2Q96PE1 1338 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 MYH11P35749 1972 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 UQCRHLA0A096LP55 91 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 B4DLN1 442 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 PPP1R37O75864 691 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 FGFR1OPO95684 399 aaKnown RBP14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 UQCRHP07919 91 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 ANKRD20A12PQ8NF67 263 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 MYRIPQ8NFW9 859 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 PPP1R13BQ96KQ4 1090 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 PRIMPOLQ96LW4 560 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 PARVGQ9HBI0 331 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 PDLIM7Q9NR12 457 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 MAFBQ9Y5Q3 323 aaPredicted RBP14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 SYNGAP1Q96PV0 1343 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 PASKQ96RG2 1323 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 PSAPP07602 524 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 PADI6Q6TGC4 694 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 CNOT6LQ96LI5 555 aaKnown RBP14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 ST6GALNAC4Q9H4F1 302 aa14.81□□□□□ -0.04
TMEM50B-201ENST00000420455 PDXKO00764 312 aa14.8□□□□□ -0.04
TMEM50B-201ENST00000420455 DKC1O60832 514 aaKnown RBP eCLIP14.8□□□□□ -0.04
TMEM50B-201ENST00000420455 TBCAO75347 108 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms