RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 FAM20AQ96MK3 541 aa20.55■□□□□ 0.88
ECHDC3-202ENST00000420401 CTAGE1Q96RT6 745 aa20.55■□□□□ 0.88
ECHDC3-202ENST00000420401 ZNF302Q9NR11 478 aa20.55■□□□□ 0.88
ECHDC3-202ENST00000420401 SETD4Q9NVD3 440 aa20.55■□□□□ 0.88
ECHDC3-202ENST00000420401 SMC3Q9UQE7 1217 aa20.55■□□□□ 0.88
ECHDC3-202ENST00000420401 UMODL1Q5DID0 1318 aa20.54■□□□□ 0.88
ECHDC3-202ENST00000420401 FAM205CA6NFA0 338 aa20.54■□□□□ 0.88
ECHDC3-202ENST00000420401 TBX3O15119 743 aa20.54■□□□□ 0.88
ECHDC3-202ENST00000420401 SLC37A4O43826 429 aa20.54■□□□□ 0.88
ECHDC3-202ENST00000420401 SFNP31947 248 aa20.54■□□□□ 0.88
ECHDC3-202ENST00000420401 ZNF200P98182 395 aaPredicted RBP20.54■□□□□ 0.88
ECHDC3-202ENST00000420401 HIC1Q14526 733 aa20.54■□□□□ 0.88
ECHDC3-202ENST00000420401 SWSAP1Q6NVH7 229 aa20.54■□□□□ 0.88
ECHDC3-202ENST00000420401 SERINC5Q86VE9 423 aa20.54■□□□□ 0.88
ECHDC3-202ENST00000420401 RPUSD2Q8IZ73 545 aaKnown RBP20.54■□□□□ 0.88
ECHDC3-202ENST00000420401 WNT8AQ9H1J5 351 aa20.54■□□□□ 0.88
ECHDC3-202ENST00000420401 TRPC6Q9Y210 931 aa20.54■□□□□ 0.88
ECHDC3-202ENST00000420401 RRN3P2A6NIE6 340 aa20.53■□□□□ 0.88
ECHDC3-202ENST00000420401 PSMD10O75832 226 aa20.53■□□□□ 0.88
ECHDC3-202ENST00000420401 BAG4O95429 457 aaKnown RBP20.53■□□□□ 0.88
ECHDC3-202ENST00000420401 GJB2P29033 226 aa20.53■□□□□ 0.88
ECHDC3-202ENST00000420401 RFC2P35250 354 aa20.53■□□□□ 0.88
ECHDC3-202ENST00000420401 JAK3P52333 1124 aa20.53■□□□□ 0.88
ECHDC3-202ENST00000420401 PLCB4Q15147 1175 aa20.53■□□□□ 0.88
ECHDC3-202ENST00000420401 PDXDC2PQ6P474 469 aa20.53■□□□□ 0.88
ECHDC3-202ENST00000420401 RDM1Q8NG50 284 aa20.53■□□□□ 0.88
ECHDC3-202ENST00000420401 LMBR1Q8WVP7 490 aa20.53■□□□□ 0.88
ECHDC3-202ENST00000420401 DISC1Q9NRI5 854 aa20.53■□□□□ 0.88
ECHDC3-202ENST00000420401 YBX2Q9Y2T7 364 aaKnown RBP20.53■□□□□ 0.88
ECHDC3-202ENST00000420401 TREHO43280 583 aa20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 CHMP2AO43633 222 aa20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 SELPP16109 830 aa20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 RBL2Q08999 1139 aa20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 GRIK4Q16099 956 aa20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 AAK1Q2M2I8 961 aa20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 PPP2R2DQ66LE6 453 aa20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 CCDC60Q8IWA6 550 aaPredicted RBP20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 DHX38Q92620 1227 aaKnown RBP20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 GJA10Q969M2 543 aa20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 SCLYQ96I15 445 aa20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 C1QTNF1Q9BXJ1 281 aa20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 UNC45AQ9H3U1 944 aa20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 KCNMB3Q9NPA1 279 aa20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 MAFBQ9Y5Q3 323 aaPredicted RBP20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 SLC4A7Q9Y6M7 1214 aa20.52■□□□□ 0.88
ECHDC3-202ENST00000420401 POTEB3A0JP26 581 aa20.51■□□□□ 0.87
ECHDC3-202ENST00000420401 ZBBXA8MT70 800 aa20.51■□□□□ 0.87
ECHDC3-202ENST00000420401 PARNO95453 639 aaKnown RBP20.51■□□□□ 0.87
ECHDC3-202ENST00000420401 IQCF3P0C7M6 154 aa20.51■□□□□ 0.87
ECHDC3-202ENST00000420401 CKBP12277 381 aa20.51■□□□□ 0.87
ECHDC3-202ENST00000420401 INSRRP14616 1297 aa20.51■□□□□ 0.87
ECHDC3-202ENST00000420401 SKIV2LQ15477 1246 aaKnown RBP20.51■□□□□ 0.87
ECHDC3-202ENST00000420401 POTEBQ6S5H4 581 aa20.51■□□□□ 0.87
ECHDC3-202ENST00000420401 MIER3Q7Z3K6 550 aa20.51■□□□□ 0.87
ECHDC3-202ENST00000420401 NOSTRINQ8IVI9 506 aa20.51■□□□□ 0.87
ECHDC3-202ENST00000420401 CKAP2LQ8IYA6 745 aa20.51■□□□□ 0.87
ECHDC3-202ENST00000420401 SLFN12Q8IYM2 578 aa20.51■□□□□ 0.87
ECHDC3-202ENST00000420401 ATP8B4Q8TF62 1192 aa20.51■□□□□ 0.87
ECHDC3-202ENST00000420401 GABBR1Q9UBS5 961 aa20.51■□□□□ 0.87
ECHDC3-202ENST00000420401 H3BQV1 296 aa20.5■□□□□ 0.87
ECHDC3-202ENST00000420401 HBP1O60381 514 aa20.5■□□□□ 0.87
ECHDC3-202ENST00000420401 PFKMP08237 780 aa20.5■□□□□ 0.87
ECHDC3-202ENST00000420401 THPOP40225 353 aa20.5■□□□□ 0.87
ECHDC3-202ENST00000420401 RABGGTBP53611 331 aa20.5■□□□□ 0.87
ECHDC3-202ENST00000420401 IGBP1P78318 339 aa20.5■□□□□ 0.87
ECHDC3-202ENST00000420401 ADAM17P78536 824 aa20.5■□□□□ 0.87
ECHDC3-202ENST00000420401 CUL4AQ13619 759 aa20.5■□□□□ 0.87
ECHDC3-202ENST00000420401 TRIM71Q2Q1W2 868 aaKnown RBP20.5■□□□□ 0.87
ECHDC3-202ENST00000420401 TAF2Q6P1X5 1199 aa20.5■□□□□ 0.87
ECHDC3-202ENST00000420401 LRRC8DQ7L1W4 858 aa20.5■□□□□ 0.87
ECHDC3-202ENST00000420401 POTEDQ86YR6 584 aa20.5■□□□□ 0.87
ECHDC3-202ENST00000420401 NOL7Q9UMY1 257 aaKnown RBP20.5■□□□□ 0.87
ECHDC3-202ENST00000420401 CHD7Q9P2D1 2997 aa20.49■□□□□ 0.87
ECHDC3-202ENST00000420401 CAND2O75155 1236 aa20.49■□□□□ 0.87
ECHDC3-202ENST00000420401 ATP2B1P20020 1258 aa20.49■□□□□ 0.87
ECHDC3-202ENST00000420401 U2AF2P26368 475 aaKnown RBP eCLIP20.49■□□□□ 0.87
ECHDC3-202ENST00000420401 CALCRLQ16602 461 aa20.49■□□□□ 0.87
ECHDC3-202ENST00000420401 B3GNT9Q6UX72 402 aa20.49■□□□□ 0.87
ECHDC3-202ENST00000420401 BBXQ8WY36 941 aaPredicted RBP20.49■□□□□ 0.87
ECHDC3-202ENST00000420401 HAS1Q92839 578 aa20.49■□□□□ 0.87
ECHDC3-202ENST00000420401 FAM167AQ96KS9 214 aa20.49■□□□□ 0.87
ECHDC3-202ENST00000420401 NECAB3Q96P71 396 aaPredicted RBP20.49■□□□□ 0.87
ECHDC3-202ENST00000420401 TUBE1Q9UJT0 475 aa20.49■□□□□ 0.87
ECHDC3-202ENST00000420401 PCDHA11Q9Y5I1 949 aa20.49■□□□□ 0.87
ECHDC3-202ENST00000420401 MBLAC1A4D2B0 266 aaPredicted RBP20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 NEMFO60524 1076 aa20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 RPLP2P05387 115 aaKnown RBP20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 BMP1P13497 986 aa20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 TRAPPC10P48553 1259 aa20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 PPP2R5CQ13362 524 aa20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 ORC2Q13416 577 aaPredicted RBP20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 ZNF484Q5JVG2 852 aa20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 MARCH8Q5T0T0 291 aa20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 ZNF618Q5T7W0 954 aa20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 LARP1BQ659C4 914 aaKnown RBP20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 DEFB128Q7Z7B8 93 aa20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 RSPH3Q86UC2 560 aa20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 WNT8BQ93098 351 aa20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 SNX21Q969T3 373 aa20.48■□□□□ 0.87
ECHDC3-202ENST00000420401 NRBP2Q9NSY0 501 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms