RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 ATP4AP20648 1035 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 CYP2C18P33260 490 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 SLC26A2P50443 739 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 POTEBQ6S5H4 581 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 TRMT1LQ7Z2T5 733 aaKnown RBP14.04□□□□□ -0.16
SKA1-203ENST00000417656 SERINC5Q86VE9 423 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 ATP8B4Q8TF62 1192 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 ZBTB10Q96DT7 871 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 LBHD1Q9BQE6 289 aaPredicted RBP14.04□□□□□ -0.16
SKA1-203ENST00000417656 WNT8AQ9H1J5 351 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.04□□□□□ -0.16
SKA1-203ENST00000417656 NRCAMQ92823 1304 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 SIP14410 1827 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 SCN5AQ14524 2016 aa14.03□□□□□ -0.16
SKA1-203ENST00000417656 OATP04181 439 aa14.03□□□□□ -0.16
SKA1-203ENST00000417656 ADAM17P78536 824 aa14.03□□□□□ -0.16
SKA1-203ENST00000417656 PTK7Q13308 1070 aa14.03□□□□□ -0.16
SKA1-203ENST00000417656 TRIM71Q2Q1W2 868 aaKnown RBP14.03□□□□□ -0.16
SKA1-203ENST00000417656 C4orf32Q8N8J7 132 aa14.03□□□□□ -0.16
SKA1-203ENST00000417656 GDF15Q99988 308 aa14.03□□□□□ -0.16
SKA1-203ENST00000417656 TUBE1Q9UJT0 475 aa14.03□□□□□ -0.16
SKA1-203ENST00000417656 PCDHA12Q9UN75 941 aa14.03□□□□□ -0.16
SKA1-203ENST00000417656 COL1A2P08123 1366 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 HBP1O60381 514 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 GNAT1P11488 350 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 CD44P16070 742 aaKnown RBP14.02□□□□□ -0.17
SKA1-203ENST00000417656 CCL23P55773 120 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 CYP4A11Q02928 519 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 PTGDRQ13258 359 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 BFSP2Q13515 415 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 BECN1Q14457 450 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 EPHA7Q15375 998 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 MARCH8Q5T0T0 291 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 FAM173BQ6P4H8 233 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 RUFY4Q6ZNE9 571 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 CCDC155Q8N6L0 562 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 CAGE1Q8TC20 777 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 BBXQ8WY36 941 aaPredicted RBP14.02□□□□□ -0.17
SKA1-203ENST00000417656 SCLYQ96I15 445 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 DYDC2Q96IM9 177 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 FAM167AQ96KS9 214 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 LXNQ9BS40 222 aa14.02□□□□□ -0.17
SKA1-203ENST00000417656 WRAP73Q9P2S5 460 aaPredicted RBP14.02□□□□□ -0.17
SKA1-203ENST00000417656 SEPT9Q9UHD8 586 aaPredicted RBP14.02□□□□□ -0.17
SKA1-203ENST00000417656 MBLAC1A4D2B0 266 aaPredicted RBP14.01□□□□□ -0.17
SKA1-203ENST00000417656 TMEM150BA6NC51 233 aa14.01□□□□□ -0.17
SKA1-203ENST00000417656 ZBTB42B2RXF5 422 aa14.01□□□□□ -0.17
SKA1-203ENST00000417656 RBAK-RBAKDNI3L0D1 243 aa14.01□□□□□ -0.17
SKA1-203ENST00000417656 TECP42680 631 aa14.01□□□□□ -0.17
SKA1-203ENST00000417656 PSMC5P62195 406 aa14.01□□□□□ -0.17
SKA1-203ENST00000417656 ATP2C1P98194 919 aaPredicted RBP14.01□□□□□ -0.17
SKA1-203ENST00000417656 FPGSQ05932 587 aa14.01□□□□□ -0.17
SKA1-203ENST00000417656 RBL2Q08999 1139 aa14.01□□□□□ -0.17
SKA1-203ENST00000417656 PKP1Q13835 747 aa14.01□□□□□ -0.17
SKA1-203ENST00000417656 TMEM266Q2M3C6 531 aa14.01□□□□□ -0.17
SKA1-203ENST00000417656 FOXD4L5Q5VV16 416 aaPredicted RBP14.01□□□□□ -0.17
SKA1-203ENST00000417656 MFSD5Q6N075 450 aa14.01□□□□□ -0.17
SKA1-203ENST00000417656 FOXD4L4Q8WXT5 416 aaPredicted RBP14.01□□□□□ -0.17
SKA1-203ENST00000417656 TNPO1Q92973 898 aaKnown RBP14.01□□□□□ -0.17
SKA1-203ENST00000417656 FTOQ9C0B1 505 aaKnown RBP eCLIP14.01□□□□□ -0.17
SKA1-203ENST00000417656 RGL1Q9NZL6 768 aa14.01□□□□□ -0.17
SKA1-203ENST00000417656 RRN3P2A6NIE6 340 aa14□□□□□ -0.17
SKA1-203ENST00000417656 STBD1O95210 358 aa14□□□□□ -0.17
SKA1-203ENST00000417656 P4HBP07237 508 aaKnown RBP14□□□□□ -0.17
SKA1-203ENST00000417656 CTSHP09668 335 aa14□□□□□ -0.17
SKA1-203ENST00000417656 CKBP12277 381 aa14□□□□□ -0.17
SKA1-203ENST00000417656 CSF2RAP15509 400 aa14□□□□□ -0.17
SKA1-203ENST00000417656 THPOP40225 353 aa14□□□□□ -0.17
SKA1-203ENST00000417656 QARSP47897 775 aaKnown RBP14□□□□□ -0.17
SKA1-203ENST00000417656 EPHB4P54760 987 aa14□□□□□ -0.17
SKA1-203ENST00000417656 CTTNQ14247 550 aaKnown RBP14□□□□□ -0.17
SKA1-203ENST00000417656 ZNF484Q5JVG2 852 aa14□□□□□ -0.17
SKA1-203ENST00000417656 PLA2G4FQ68DD2 849 aa14□□□□□ -0.17
SKA1-203ENST00000417656 LRRC8DQ7L1W4 858 aa14□□□□□ -0.17
SKA1-203ENST00000417656 TMEM199Q8N511 208 aa14□□□□□ -0.17
SKA1-203ENST00000417656 RETREG2Q8NC44 543 aa14□□□□□ -0.17
SKA1-203ENST00000417656 NEK9Q8TD19 979 aa14□□□□□ -0.17
SKA1-203ENST00000417656 EIF2AK1Q9BQI3 630 aaKnown RBP14□□□□□ -0.17
SKA1-203ENST00000417656 UBE2OQ9C0C9 1292 aaKnown RBP14□□□□□ -0.17
SKA1-203ENST00000417656 FAM49AQ9H0Q0 323 aaPredicted RBP14□□□□□ -0.17
SKA1-203ENST00000417656 PRO3102Q9H379 93 aa14□□□□□ -0.17
SKA1-203ENST00000417656 LAD1O00515 517 aa13.99□□□□□ -0.17
SKA1-203ENST00000417656 C22orf31O95567 290 aa13.99□□□□□ -0.17
SKA1-203ENST00000417656 SELPP16109 830 aa13.99□□□□□ -0.17
SKA1-203ENST00000417656 PRPHP41219 470 aa13.99□□□□□ -0.17
SKA1-203ENST00000417656 PPIGQ13427 754 aaKnown RBP eCLIP13.99□□□□□ -0.17
SKA1-203ENST00000417656 IL17AQ16552 155 aa13.99□□□□□ -0.17
SKA1-203ENST00000417656 MTERF2Q49AM1 385 aa13.99□□□□□ -0.17
SKA1-203ENST00000417656 XKR3Q5GH77 459 aa13.99□□□□□ -0.17
SKA1-203ENST00000417656 ZNF618Q5T7W0 954 aa13.99□□□□□ -0.17
SKA1-203ENST00000417656 TAF2Q6P1X5 1199 aa13.99□□□□□ -0.17
SKA1-203ENST00000417656 TRAF7Q6Q0C0 670 aa13.99□□□□□ -0.17
SKA1-203ENST00000417656 MTHFD1LQ6UB35 978 aa13.99□□□□□ -0.17
SKA1-203ENST00000417656 SH2D3AQ9BRG2 576 aa13.99□□□□□ -0.17
SKA1-203ENST00000417656 CEP131Q9UPN4 1083 aa13.99□□□□□ -0.17
SKA1-203ENST00000417656 COLQQ9Y215 455 aaPredicted RBP13.99□□□□□ -0.17
SKA1-203ENST00000417656 CLIC4Q9Y696 253 aa13.99□□□□□ -0.17
SKA1-203ENST00000417656 DDX11L8A8MPP1 907 aa13.98□□□□□ -0.17
SKA1-203ENST00000417656 PP2D1A8MPX8 630 aa13.98□□□□□ -0.17
SKA1-203ENST00000417656 DKC1O60832 514 aaKnown RBP eCLIP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms