RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 DDX41Q9UJV9 622 aaKnown RBP3.88□□□□□ -1.79
LINC00428-201ENST00000415620 ADAM29Q9UKF5 820 aa3.88□□□□□ -1.79
LINC00428-201ENST00000415620 SUGT1Q9Y2Z0 365 aa3.88□□□□□ -1.79
LINC00428-201ENST00000415620 PCDHGB7Q9Y5F8 929 aa3.88□□□□□ -1.79
LINC00428-201ENST00000415620 ADGRB2O60241 1585 aa3.88□□□□□ -1.79
LINC00428-201ENST00000415620 INO80Q9ULG1 1556 aaPredicted RBP3.88□□□□□ -1.79
LINC00428-201ENST00000415620 COL22A1Q8NFW1 1626 aaPredicted RBP3.88□□□□□ -1.79
LINC00428-201ENST00000415620 CFAP65Q6ZU64 1925 aaKnown RBP3.87□□□□□ -1.79
LINC00428-201ENST00000415620 DISP2A7MBM2 1401 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 MIA2Q96PC5 1412 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 ATP10DQ9P241 1426 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 SLIT1O75093 1534 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 TCRBV5S2A0A599 114 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 FAM83GA6ND36 823 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 FOXS1O43638 330 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 KCNH1O95259 989 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 GTF2A2P52657 109 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 ZNF143P52747 638 aaPredicted RBP3.87□□□□□ -1.79
LINC00428-201ENST00000415620 CASP7P55210 303 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 EIF6P56537 245 aaKnown RBP3.87□□□□□ -1.79
LINC00428-201ENST00000415620 RPL11P62913 178 aaKnown RBP3.87□□□□□ -1.79
LINC00428-201ENST00000415620 HNRNPA0Q13151 305 aaKnown RBP3.87□□□□□ -1.79
LINC00428-201ENST00000415620 EFCAB2Q5VUJ9 269 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 E4F1Q66K89 784 aaPredicted RBP3.87□□□□□ -1.79
LINC00428-201ENST00000415620 GTF2IRD2BQ6EKJ0 949 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 IQCEQ6IPM2 695 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 TCTN3Q6NUS6 607 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 GGT6Q6P531 493 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 BRINP3Q76B58 766 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 GTF2IRD2Q86UP8 949 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 CCDC103Q8IW40 242 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 JMYQ8N9B5 988 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 ARRDC4Q8NCT1 418 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 GIMAP8Q8ND71 665 aaPredicted RBP3.87□□□□□ -1.79
LINC00428-201ENST00000415620 BVESQ8NE79 360 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 RASGRP4Q8TDF6 673 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 EDAQ92838 391 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 DDX17Q92841 729 aaKnown RBP3.87□□□□□ -1.79
LINC00428-201ENST00000415620 GNRHR2Q96P88 292 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 CRAMP1Q96RY5 1269 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 CRBNQ96SW2 442 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 NKX2-4Q9H2Z4 354 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 TIMELESSQ9UNS1 1208 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 TIMM13Q9Y5L4 95 aaPredicted RBP3.87□□□□□ -1.79
LINC00428-201ENST00000415620 PREX2Q70Z35 1606 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 TET3O43151 1660 aa3.87□□□□□ -1.79
LINC00428-201ENST00000415620 PCSK5Q92824 1860 aa3.86□□□□□ -1.79
LINC00428-201ENST00000415620 PLEKHD1A6NEE1 506 aa3.86□□□□□ -1.79
LINC00428-201ENST00000415620 CNOT4O95628 575 aaKnown RBP3.86□□□□□ -1.79
LINC00428-201ENST00000415620 KIAA1211LQ6NV74 962 aa3.86□□□□□ -1.79
LINC00428-201ENST00000415620 POMZP3Q6PJE2 187 aa3.86□□□□□ -1.79
LINC00428-201ENST00000415620 CEP68Q76N32 757 aa3.86□□□□□ -1.79
LINC00428-201ENST00000415620 RALYLQ86SE5 291 aaKnown RBP3.86□□□□□ -1.79
LINC00428-201ENST00000415620 CRACR2BQ8N4Y2 399 aaPredicted RBP3.86□□□□□ -1.79
LINC00428-201ENST00000415620 NEU4Q8WWR8 484 aaPredicted RBP3.86□□□□□ -1.79
LINC00428-201ENST00000415620 EXTL1Q92935 676 aa3.86□□□□□ -1.79
LINC00428-201ENST00000415620 SHDQ96IW2 340 aa3.86□□□□□ -1.79
LINC00428-201ENST00000415620 SPATA32Q96LK8 384 aa3.86□□□□□ -1.79
LINC00428-201ENST00000415620 LMF1Q96S06 567 aa3.86□□□□□ -1.79
LINC00428-201ENST00000415620 TMEFF2Q9UIK5 374 aaPredicted RBP3.86□□□□□ -1.79
LINC00428-201ENST00000415620 FBXL7Q9UJT9 491 aa3.86□□□□□ -1.79
LINC00428-201ENST00000415620 CROCC2H7BZ55 1655 aa3.86□□□□□ -1.79
LINC00428-201ENST00000415620 AATKQ6ZMQ8 1374 aa3.86□□□□□ -1.79
LINC00428-201ENST00000415620 PLCH1Q4KWH8 1693 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 HGSO14964 777 aaPredicted RBP3.85□□□□□ -1.79
LINC00428-201ENST00000415620 KLHL18O94889 574 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 SCG5P05408 212 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 KCNA6P17658 529 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 COMTP21964 271 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 BCL6P41182 706 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 PAK2Q13177 524 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 CHRNA2Q15822 529 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 ACBD5Q5T8D3 534 aaPredicted RBP3.85□□□□□ -1.79
LINC00428-201ENST00000415620 DPY19L2P1Q6NXN4 242 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 VHLLQ6RSH7 139 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 PROSER1Q86XN7 944 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 KREMEN2Q8NCW0 462 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 TRMT2BQ96GJ1 504 aaKnown RBP3.85□□□□□ -1.79
LINC00428-201ENST00000415620 NAF1Q96HR8 494 aaKnown RBP3.85□□□□□ -1.79
LINC00428-201ENST00000415620 SYT17Q9BSW7 474 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 BACH2Q9BYV9 841 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 SLC4A7Q9Y6M7 1214 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 PTCH1Q13635 1447 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 EFCAB6Q5THR3 1501 aa3.85□□□□□ -1.79
LINC00428-201ENST00000415620 TMEM131LA2VDJ0 1609 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 PIK3C2BO00750 1634 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 LAMC1P11047 1609 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 CDC42BPAQ5VT25 1732 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 H7BY64 318 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 LMO1P25800 156 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 ATXN1P54253 815 aaKnown RBP3.84□□□□□ -1.79
LINC00428-201ENST00000415620 DGCR2P98153 550 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 KCNAB2Q13303 367 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 AGBL4Q5VU57 503 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 KRT27Q7Z3Y8 459 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 TAX1BP1Q86VP1 789 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 IFNL2Q8IZJ0 200 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 NUDT10Q8NFP7 164 aa3.84□□□□□ -1.79
LINC00428-201ENST00000415620 DIO2Q92813 273 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms