RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 GTF2F1P35269 517 aaKnown RBP eCLIP11.11□□□□□ -0.63
DDB1-202ENST00000414411 KRT76Q01546 638 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 TMEM266Q2M3C6 531 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 ZNF746Q6NUN9 644 aaPredicted RBP11.11□□□□□ -0.63
DDB1-202ENST00000414411 FBXO46Q6PJ61 603 aaPredicted RBP11.11□□□□□ -0.63
DDB1-202ENST00000414411 USP49Q70CQ1 688 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 AK8Q96MA6 479 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 SLC9A2Q9UBY0 812 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 DDX39AO00148 427 aaKnown RBP11.11□□□□□ -0.63
DDB1-202ENST00000414411 DUSP11O75319 330 aaKnown RBP11.11□□□□□ -0.63
DDB1-202ENST00000414411 GH1P01241 217 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 CDC25AP30304 524 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 GSDMDP57764 484 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 NKX3-2P78367 333 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 LAMC2Q13753 1193 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 ARID5BQ14865 1188 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 HSDL1Q3SXM5 330 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 FILIP1Q7Z7B0 1213 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 SH3TC2Q8TF17 1288 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 ZNF592Q92610 1267 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 HSD17B14Q9BPX1 270 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 MMTAG2Q9BU76 263 aaKnown RBP11.11□□□□□ -0.63
DDB1-202ENST00000414411 RAB34Q9BZG1 259 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 MLXIPQ9HAP2 919 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 FAM13BQ9NYF5 915 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 IMPACTQ9P2X3 320 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 LRWD1Q9UFC0 647 aa11.11□□□□□ -0.63
DDB1-202ENST00000414411 GSTTP1A0A1W2PQM5 241 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 ACTR2P61160 394 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 CCZ1BP86790 482 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 CCZ1P86791 482 aaPredicted RBP11.1□□□□□ -0.63
DDB1-202ENST00000414411 MDM2Q00987 491 aaPredicted RBP11.1□□□□□ -0.63
DDB1-202ENST00000414411 MYL5Q02045 173 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 HSP90AA2PQ14568 343 aaPredicted RBP11.1□□□□□ -0.63
DDB1-202ENST00000414411 SLC9C1Q4G0N8 1177 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 SPECC1Q5M775 1068 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 ISM2Q6H9L7 571 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 ABHD15Q6UXT9 468 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 SMAP1Q8IYB5 467 aaPredicted RBP11.1□□□□□ -0.63
DDB1-202ENST00000414411 RDM1Q8NG50 284 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 EPSTI1Q96J88 318 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 GPR20Q99678 358 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 XPO4Q9C0E2 1151 aaKnown RBP11.1□□□□□ -0.63
DDB1-202ENST00000414411 HSD3B7Q9H2F3 369 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 DISC1Q9NRI5 854 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 HOOK1Q9UJC3 728 aaKnown RBP11.1□□□□□ -0.63
DDB1-202ENST00000414411 PCDHA5Q9Y5H7 936 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 PCDHA10Q9Y5I2 948 aa11.1□□□□□ -0.63
DDB1-202ENST00000414411 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.1□□□□□ -0.63
DDB1-202ENST00000414411 IGKV6D-21A0A0A0MT36 114 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 A6NJR5 290 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 PP2D1A8MPX8 630 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 DYNC1LI2O43237 492 aaPredicted RBP11.09□□□□□ -0.63
DDB1-202ENST00000414411 SORBS3O60504 671 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 SMC2O95347 1197 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 HOXD8P13378 290 aaPredicted RBP11.09□□□□□ -0.63
DDB1-202ENST00000414411 CNGA1P29973 690 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 SFNP31947 248 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 EPHA7Q15375 998 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 PPTC7Q8NI37 304 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 SYMPKQ92797 1274 aaKnown RBP11.09□□□□□ -0.63
DDB1-202ENST00000414411 LENG1Q96BZ8 264 aaPredicted RBP11.09□□□□□ -0.63
DDB1-202ENST00000414411 SPATA33Q96N06 139 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 CCSER1Q9C0I3 900 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 HMX1Q9NP08 348 aaPredicted RBP11.09□□□□□ -0.63
DDB1-202ENST00000414411 IFNKQ9P0W0 207 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 WDR64B1ANS9 1081 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 POLR2DO15514 142 aaKnown RBP11.09□□□□□ -0.63
DDB1-202ENST00000414411 CHMP2AO43633 222 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 PPFIA4O75335 1185 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 SLITRK3O94933 977 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 SPATA31C1P0DKV0 1188 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 SKILP12757 684 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 RPA1P27694 616 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 JAK3P52333 1124 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 GJA9P57773 515 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 POSTNQ15063 836 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 NT5DC1Q5TFE4 455 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 LHX8Q68G74 356 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 NCAPH2Q6IBW4 605 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 MIER3Q7Z3K6 550 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 TLK2Q86UE8 772 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 AFG1LQ8WV93 481 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 SEPT1Q8WYJ6 367 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 ARMC5Q96C12 935 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 C16orf45Q96MC5 204 aaPredicted RBP11.09□□□□□ -0.63
DDB1-202ENST00000414411 POLR3CQ9BUI4 534 aaPredicted RBP11.09□□□□□ -0.63
DDB1-202ENST00000414411 UPF3AQ9H1J1 476 aaKnown RBP11.09□□□□□ -0.63
DDB1-202ENST00000414411 SLC24A3Q9HC58 644 aa11.09□□□□□ -0.63
DDB1-202ENST00000414411 MYH9P35579 1960 aaKnown RBP11.09□□□□□ -0.63
DDB1-202ENST00000414411 KIAA0100Q14667 2235 aaKnown RBP11.08□□□□□ -0.64
DDB1-202ENST00000414411 BMP6P22004 513 aa11.08□□□□□ -0.64
DDB1-202ENST00000414411 UBA7P41226 1012 aa11.08□□□□□ -0.64
DDB1-202ENST00000414411 RBM10P98175 930 aaKnown RBP11.08□□□□□ -0.64
DDB1-202ENST00000414411 FANCCQ00597 558 aa11.08□□□□□ -0.64
DDB1-202ENST00000414411 PDAP1Q13442 181 aaKnown RBP11.08□□□□□ -0.64
DDB1-202ENST00000414411 HYIQ5T013 277 aa11.08□□□□□ -0.64
DDB1-202ENST00000414411 CATSPER3Q86XQ3 398 aa11.08□□□□□ -0.64
DDB1-202ENST00000414411 OR6J1Q8NGC5 347 aa11.08□□□□□ -0.64
DDB1-202ENST00000414411 PCYT2Q99447 389 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms