RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 SF3A1Q15459 793 aaKnown RBP18.49■□□□□ 0.55
LINC00398-201ENST00000414407 MARCH8Q5T0T0 291 aa18.49■□□□□ 0.55
LINC00398-201ENST00000414407 C4orf19Q8IY42 314 aa18.49■□□□□ 0.55
LINC00398-201ENST00000414407 IGSF22Q8N9C0 903 aa18.49■□□□□ 0.55
LINC00398-201ENST00000414407 ERMNQ8TAM6 284 aa18.49■□□□□ 0.55
LINC00398-201ENST00000414407 CAGE1Q8TC20 777 aa18.49■□□□□ 0.55
LINC00398-201ENST00000414407 EIF2AK1Q9BQI3 630 aaKnown RBP18.49■□□□□ 0.55
LINC00398-201ENST00000414407 NOC4LQ9BVI4 516 aaKnown RBP18.49■□□□□ 0.55
LINC00398-201ENST00000414407 NIFKQ9BYG3 293 aaKnown RBP18.49■□□□□ 0.55
LINC00398-201ENST00000414407 HIPK3Q9H422 1215 aa18.49■□□□□ 0.55
LINC00398-201ENST00000414407 ZSWIM4Q9H7M6 989 aa18.49■□□□□ 0.55
LINC00398-201ENST00000414407 ZMYND8Q9ULU4 1186 aaPredicted RBP18.49■□□□□ 0.55
LINC00398-201ENST00000414407 POTEMA6NI47 508 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 TREHO43280 583 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 CAND2O75155 1236 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 SLITRK3O94933 977 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 STBD1O95210 358 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 LYPLA2O95372 231 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 BRD1O95696 1058 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 RPLP2P05387 115 aaKnown RBP18.48■□□□□ 0.55
LINC00398-201ENST00000414407 CYP2C9P11712 490 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 SYN1P17600 705 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 MUTP22033 750 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 PKP1Q13835 747 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 ATL3Q6DD88 541 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 TAF2Q6P1X5 1199 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 RPAINQ86UA6 219 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 BANK1Q8NDB2 785 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 LXNQ9BS40 222 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 POLR3CQ9BUI4 534 aaPredicted RBP18.48■□□□□ 0.55
LINC00398-201ENST00000414407 TUFT1Q9NNX1 390 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 LRWD1Q9UFC0 647 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 TUBE1Q9UJT0 475 aa18.48■□□□□ 0.55
LINC00398-201ENST00000414407 ZBTB42B2RXF5 422 aa18.47■□□□□ 0.55
LINC00398-201ENST00000414407 PTPAQ15257 358 aa18.47■□□□□ 0.55
LINC00398-201ENST00000414407 IL17AQ16552 155 aa18.47■□□□□ 0.55
LINC00398-201ENST00000414407 HAUS3Q68CZ6 603 aa18.47■□□□□ 0.55
LINC00398-201ENST00000414407 FAM173BQ6P4H8 233 aa18.47■□□□□ 0.55
LINC00398-201ENST00000414407 DHX38Q92620 1227 aaKnown RBP18.47■□□□□ 0.55
LINC00398-201ENST00000414407 DYDC2Q96IM9 177 aa18.47■□□□□ 0.55
LINC00398-201ENST00000414407 ZNF396Q96N95 335 aaPredicted RBP18.47■□□□□ 0.55
LINC00398-201ENST00000414407 RGL1Q9NZL6 768 aa18.47■□□□□ 0.55
LINC00398-201ENST00000414407 PPME1Q9Y570 386 aa18.47■□□□□ 0.55
LINC00398-201ENST00000414407 PCDHA2Q9Y5H9 948 aa18.47■□□□□ 0.55
LINC00398-201ENST00000414407 MYH9P35579 1960 aaKnown RBP18.47■□□□□ 0.55
LINC00398-201ENST00000414407 PDE4DIPQ5VU43 2346 aa18.47■□□□□ 0.55
LINC00398-201ENST00000414407 MAGEB2O15479 319 aa18.46■□□□□ 0.55
LINC00398-201ENST00000414407 XRCC6P12956 609 aaKnown RBP eCLIP18.46■□□□□ 0.55
LINC00398-201ENST00000414407 ITGB8P26012 769 aa18.46■□□□□ 0.55
LINC00398-201ENST00000414407 RPA1P27694 616 aa18.46■□□□□ 0.55
LINC00398-201ENST00000414407 IGBP1P78318 339 aa18.46■□□□□ 0.55
LINC00398-201ENST00000414407 TARBP2Q15633 366 aaKnown RBP18.46■□□□□ 0.55
LINC00398-201ENST00000414407 TRIM71Q2Q1W2 868 aaKnown RBP18.46■□□□□ 0.55
LINC00398-201ENST00000414407 MFSD5Q6N075 450 aa18.46■□□□□ 0.55
LINC00398-201ENST00000414407 MTHFD1LQ6UB35 978 aa18.46■□□□□ 0.55
LINC00398-201ENST00000414407 TPH2Q8IWU9 490 aa18.46■□□□□ 0.55
LINC00398-201ENST00000414407 RETREG2Q8NC44 543 aa18.46■□□□□ 0.55
LINC00398-201ENST00000414407 LBHD1Q9BQE6 289 aaPredicted RBP18.46■□□□□ 0.55
LINC00398-201ENST00000414407 WRAP73Q9P2S5 460 aaPredicted RBP18.46■□□□□ 0.55
LINC00398-201ENST00000414407 CLIC4Q9Y696 253 aa18.46■□□□□ 0.55
LINC00398-201ENST00000414407 WDR81Q562E7 1941 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 DDX11L8A8MPP1 907 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 PARNO95453 639 aaKnown RBP18.45■□□□□ 0.54
LINC00398-201ENST00000414407 SPATA31C1P0DKV0 1188 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 KLRC1P26715 233 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 DDIT3P35638 169 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 NASPP49321 788 aaPredicted RBP18.45■□□□□ 0.54
LINC00398-201ENST00000414407 CYP4A11Q02928 519 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 CTTNQ14247 550 aaKnown RBP18.45■□□□□ 0.54
LINC00398-201ENST00000414407 SLC39A14Q15043 492 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 PRPF38BQ5VTL8 546 aaKnown RBP18.45■□□□□ 0.54
LINC00398-201ENST00000414407 ANO5Q75V66 913 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 OTUD6AQ7L8S5 288 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 CATSPER3Q86XQ3 398 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 TMEM199Q8N511 208 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 AK8Q96MA6 479 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 USP28Q96RU2 1077 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 PPP1R12CQ9BZL4 782 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 DAXXQ9UER7 740 aaPredicted RBP18.45■□□□□ 0.54
LINC00398-201ENST00000414407 ZDHHC9Q9Y397 364 aa18.45■□□□□ 0.54
LINC00398-201ENST00000414407 KAT6AQ92794 2004 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 SMIM35A0A1B0GVV1 85 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 VWA3AA6NCI4 1184 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 C22orf31O95567 290 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 CKBP12277 381 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 SELPP16109 830 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 YWHABP31946 246 aaKnown RBP18.44■□□□□ 0.54
LINC00398-201ENST00000414407 CYP2C18P33260 490 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 FOXD4L5Q5VV16 416 aaPredicted RBP18.44■□□□□ 0.54
LINC00398-201ENST00000414407 KRT79Q5XKE5 535 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 RSPH3Q86UC2 560 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 EXOC8Q8IYI6 725 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 NME8Q8N427 588 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 TRAPPC12Q8WVT3 735 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 FOXD4L4Q8WXT5 416 aaPredicted RBP18.44■□□□□ 0.54
LINC00398-201ENST00000414407 BADQ92934 168 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 WNT8BQ93098 351 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 CEP89Q96ST8 783 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 GDF15Q99988 308 aa18.44■□□□□ 0.54
LINC00398-201ENST00000414407 FTOQ9C0B1 505 aaKnown RBP eCLIP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms