RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CCT5P48643 541 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 CACNB3P54284 484 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 KRT83P78385 493 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 PRKG2Q13237 762 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 KRT32Q14532 448 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 TSGA10IPQ3SY00 556 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 TRIM65Q6PJ69 517 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 CATSPER4Q7RTX7 472 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 MILR1Q7Z6M3 343 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 TPCN2Q8NHX9 752 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 FUT8Q9BYC5 575 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 TAOK3Q9H2K8 898 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 ZCCHC17Q9NP64 241 aaKnown RBP10.34□□□□□ -0.75
SNHG3-201ENST00000413987 BLOC1S4Q9NUP1 217 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 GTF3C4Q9UKN8 822 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 MROH7-TTC4A0A0A0MT08 1334 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 NEDD4P46934 1319 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 SLURP2P0DP57 97 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 CAPN3P20807 821 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 HPDP32754 393 aaPredicted RBP10.34□□□□□ -0.75
SNHG3-201ENST00000413987 WWC2Q6AWC2 1192 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 RNF180Q86T96 592 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 MAPKAPK5Q8IW41 473 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 SYNPOQ8N3V7 929 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 ENGASEQ8NFI3 743 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 USP33Q8TEY7 942 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 THAP3Q8WTV1 239 aaPredicted RBP10.34□□□□□ -0.75
SNHG3-201ENST00000413987 TGFBRAP1Q8WUH2 860 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 NUP133Q8WUM0 1156 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 SYMPKQ92797 1274 aaKnown RBP10.34□□□□□ -0.75
SNHG3-201ENST00000413987 ALKBH8Q96BT7 664 aaKnown RBP10.34□□□□□ -0.75
SNHG3-201ENST00000413987 MTMR8Q96EF0 704 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 FAM129BQ96TA1 746 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 MRPL9Q9BYD2 267 aaKnown RBP10.34□□□□□ -0.75
SNHG3-201ENST00000413987 PLEKHA5Q9HAU0 1116 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 PRKAG3Q9UGI9 489 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 SAP30BPQ9UHR5 308 aaKnown RBP10.34□□□□□ -0.75
SNHG3-201ENST00000413987 FAM50BQ9Y247 325 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 DAGLAQ9Y4D2 1042 aa10.34□□□□□ -0.75
SNHG3-201ENST00000413987 ZNF646O15015 1829 aaPredicted RBP10.34□□□□□ -0.75
SNHG3-201ENST00000413987 LAMA4Q16363 1823 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 FAM25EA8MYX2 175 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 PSMD14O00487 310 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 ZNF213O14771 459 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 PRDM1O75626 825 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 IARSP41252 1262 aaKnown RBP10.33□□□□□ -0.76
SNHG3-201ENST00000413987 HSD17B7P56937 341 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 IMMTQ16891 758 aaKnown RBP10.33□□□□□ -0.76
SNHG3-201ENST00000413987 CYP26C1Q6V0L0 522 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 NIM1KQ8IY84 436 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 BRF1Q92994 677 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 NEK1Q96PY6 1258 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 PURBQ96QR8 312 aaKnown RBP10.33□□□□□ -0.76
SNHG3-201ENST00000413987 LLPHQ9BRT6 129 aaKnown RBP10.33□□□□□ -0.76
SNHG3-201ENST00000413987 YIPF4Q9BSR8 244 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 SYT17Q9BSW7 474 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 CFHR5Q9BXR6 569 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 VPS33BQ9H267 617 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 ALG13Q9NP73 1137 aaKnown RBP10.33□□□□□ -0.76
SNHG3-201ENST00000413987 MKS1Q9NXB0 559 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 IFNKQ9P0W0 207 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 SCAF8Q9UPN6 1271 aaKnown RBP10.33□□□□□ -0.76
SNHG3-201ENST00000413987 PTCH2Q9Y6C5 1203 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 MAP2K7O14733 419 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 MYO1BO43795 1136 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 ENPP1P22413 925 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 PPP2R3AQ06190 1150 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 SAFBQ15424 915 aaKnown RBP eCLIP10.33□□□□□ -0.76
SNHG3-201ENST00000413987 FER1L6Q2WGJ9 1857 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 RRP12Q5JTH9 1297 aaKnown RBP10.33□□□□□ -0.76
SNHG3-201ENST00000413987 ISM2Q6H9L7 571 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 CCBE1Q6UXH8 406 aaPredicted RBP10.33□□□□□ -0.76
SNHG3-201ENST00000413987 RAB11FIP4Q86YS3 637 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 UHMK1Q8TAS1 419 aaKnown RBP10.33□□□□□ -0.76
SNHG3-201ENST00000413987 TBC1D22AQ8WUA7 517 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 CHMP4CQ96CF2 233 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 ANAPC16Q96DE5 110 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 AGAP3Q96P47 875 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 PARD6BQ9BYG5 372 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 RHOBTB2Q9BYZ6 727 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 DCP1AQ9NPI6 582 aaPredicted RBP10.33□□□□□ -0.76
SNHG3-201ENST00000413987 DMTF1Q9Y222 760 aa10.33□□□□□ -0.76
SNHG3-201ENST00000413987 B4E1Z4 1266 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 RFPL1O75677 317 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 PRR29P0C7W0 189 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 TXLNAP40222 546 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 ATP1A2P50993 1020 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 RBM5P52756 815 aaKnown RBP eCLIP10.32□□□□□ -0.76
SNHG3-201ENST00000413987 PLIN5Q00G26 463 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 ITKQ08881 620 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 TOB2Q14106 344 aaPredicted RBP10.32□□□□□ -0.76
SNHG3-201ENST00000413987 ARMC4Q5T2S8 1044 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 STRIP1Q5VSL9 837 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 ZBTB46Q86UZ6 589 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 ZNF454Q8N9F8 522 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 SUPT20HQ8NEM7 779 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 PARD3BQ8TEW8 1205 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 SDF4Q9BRK5 362 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 FAM107BQ9H098 131 aa10.32□□□□□ -0.76
SNHG3-201ENST00000413987 TOMM22Q9NS69 142 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms