RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 EDEM3Q9BZQ6 932 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 TRIM6Q9C030 488 aaPredicted RBP9.74□□□□□ -0.85
SIK3-202ENST00000413553 SWAP70Q9UH65 585 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 AMACRQ9UHK6 382 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 NOC2LQ9Y3T9 749 aaKnown RBP9.74□□□□□ -0.85
SIK3-202ENST00000413553 ABCB11O95342 1321 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 LAMB1P07942 1786 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 PGRMC1O00264 195 aaKnown RBP9.74□□□□□ -0.85
SIK3-202ENST00000413553 KRIT1O00522 736 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 ATP6V1G2O95670 118 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 CLTAP09496 248 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 GOLGA8HP0CJ92 632 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 MYBP10242 640 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 DHX9Q08211 1270 aaKnown RBP9.74□□□□□ -0.85
SIK3-202ENST00000413553 DNAAF5Q86Y56 855 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 CCT6BQ92526 530 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 MMTAG2Q9BU76 263 aaKnown RBP9.74□□□□□ -0.85
SIK3-202ENST00000413553 CRNKL1Q9BZJ0 848 aaKnown RBP9.74□□□□□ -0.85
SIK3-202ENST00000413553 CPVLQ9H3G5 476 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 NOD2Q9HC29 1040 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 DCP1AQ9NPI6 582 aaPredicted RBP9.74□□□□□ -0.85
SIK3-202ENST00000413553 COL4A3BPQ9Y5P4 624 aa9.74□□□□□ -0.85
SIK3-202ENST00000413553 C5orf60A6NFR6 353 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 STXBP3O00186 592 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 ELF3P78545 371 aaPredicted RBP9.73□□□□□ -0.85
SIK3-202ENST00000413553 LACTB2Q53H82 288 aaPredicted RBP9.73□□□□□ -0.85
SIK3-202ENST00000413553 COBLL1Q53SF7 1204 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 MFSD14BQ5SR56 506 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 LRCH2Q5VUJ6 765 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 NEK8Q86SG6 692 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 ANKS4BQ8N8V4 417 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 CCDC197Q8NCU1 140 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 CNKSR1Q969H4 720 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 CHMP6Q96FZ7 201 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 GOPCQ9HD26 462 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 BARHL2Q9NY43 387 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 ATP8A1Q9Y2Q0 1164 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 COL1A1P02452 1464 aaPredicted RBP9.73□□□□□ -0.85
SIK3-202ENST00000413553 TTI1O43156 1089 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 SKAP2O75563 359 aaPredicted RBP9.73□□□□□ -0.85
SIK3-202ENST00000413553 DNAJC8O75937 253 aaPredicted RBP9.73□□□□□ -0.85
SIK3-202ENST00000413553 NOL4O94818 638 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 GTF2IP78347 998 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 MYO1EQ12965 1108 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 DOK7Q18PE1 504 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 ACCSLQ4AC99 568 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 KRT25Q7Z3Z0 450 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 FMNL3Q8IVF7 1028 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 CCDC63Q8NA47 563 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 MAGEC3Q8TD91 643 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 P3H4Q92791 437 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 FAXDC2Q96IV6 333 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 CELF4Q9BZC1 486 aaKnown RBP9.73□□□□□ -0.85
SIK3-202ENST00000413553 BLOC1S4Q9NUP1 217 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 MCM9Q9NXL9 1143 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 TBC1D7Q9P0N9 293 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 TMEM59LQ9UK28 342 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 PNMA2Q9UL42 364 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 STX8Q9UNK0 236 aa9.73□□□□□ -0.85
SIK3-202ENST00000413553 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.73□□□□□ -0.85
SIK3-202ENST00000413553 CCDC189A1A4V9 331 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 SMIM23A6NLE4 172 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 CYTH3O43739 400 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 MGRN1O60291 552 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 ZBTB7AO95365 584 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 PAEPP09466 180 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 DRD4P21917 467 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 GNAQP50148 359 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 SATB1Q01826 763 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 GRB10Q13322 594 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 NBPF9Q3BBW0 867 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 GALNT17Q6IS24 598 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 TMC3Q7Z5M5 1100 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 DAGLBQ8NCG7 672 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 ZNF384Q8TF68 577 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 PBKQ96KB5 322 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 XPO6Q96QU8 1125 aaKnown RBP9.72□□□□□ -0.85
SIK3-202ENST00000413553 KDM4CQ9H3R0 1056 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 LRRC4CQ9HCJ2 640 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 MAD2L2Q9UI95 211 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 PVALEFA0A1B0GWK0 134 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 TLDC2A0PJX2 215 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 CCT8L1PA6NM43 557 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 F8W031 263 aaPredicted RBP9.72□□□□□ -0.85
SIK3-202ENST00000413553 BAG3O95817 575 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 ITGA4P13612 1032 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 USP11P51784 963 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 GSTO1P78417 241 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 GRM4Q14833 912 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 DIXDC1Q155Q3 683 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 TBC1D1Q86TI0 1168 aaPredicted RBP9.72□□□□□ -0.85
SIK3-202ENST00000413553 NELFCDQ8IXH7 590 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 MYOCDQ8IZQ8 938 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 EIF1ADQ8N9N8 165 aaKnown RBP9.72□□□□□ -0.85
SIK3-202ENST00000413553 TBCKQ8TEA7 893 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 SCFD2Q8WU76 684 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 DDX12PQ92771 950 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 SYN2Q92777 582 aaPredicted RBP9.72□□□□□ -0.85
SIK3-202ENST00000413553 CUL5Q93034 780 aa9.72□□□□□ -0.85
SIK3-202ENST00000413553 STAMBPL1Q96FJ0 436 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms