RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 CUL5Q93034 780 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 DDX47Q9H0S4 455 aaKnown RBP19.24■□□□□ 0.67
SDCBP-202ENST00000413219 CNOT10Q9H9A5 744 aaKnown RBP19.24■□□□□ 0.67
SDCBP-202ENST00000413219 KANSL2Q9H9L4 492 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 ARMCX3Q9UH62 379 aaPredicted RBP19.24■□□□□ 0.67
SDCBP-202ENST00000413219 FRMPD2Q68DX3 1309 aaPredicted RBP19.24■□□□□ 0.67
SDCBP-202ENST00000413219 E9PMD0 336 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 GFPT2O94808 682 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 H2AFZP0C0S5 128 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 RDXP35241 583 aaKnown RBP19.24■□□□□ 0.67
SDCBP-202ENST00000413219 CDR1P51861 262 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 EXOC3L4Q17RC7 722 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 TPTE2Q6XPS3 522 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 H2AFVQ71UI9 128 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 CCDC114Q96M63 670 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 MXD3Q9BW11 206 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 AP1M1Q9BXS5 423 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 MTMR4Q9NYA4 1195 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 NARFQ9UHQ1 456 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 KIAA1024Q9UPX6 916 aa19.24■□□□□ 0.67
SDCBP-202ENST00000413219 ODF2Q5BJF6 829 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 CACNA2D3Q8IZS8 1091 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 TATDN2Q93075 761 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 ZKSCAN4Q969J2 545 aaPredicted RBP19.23■□□□□ 0.67
SDCBP-202ENST00000413219 CENPTQ96BT3 561 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 SEC16BQ96JE7 1060 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 MYH4Q9Y623 1939 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 DAPK3O43293 454 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 ACTN1P12814 892 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 SLC9A1P19634 815 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 PON1P27169 355 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 UBE2SQ16763 222 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 ANKRD20A8PQ5CZ79 823 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 RAPGEF5Q92565 580 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 FAM163AQ96GL9 167 aaPredicted RBP19.23■□□□□ 0.67
SDCBP-202ENST00000413219 HES6Q96HZ4 224 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 OSBPL7Q9BZF2 842 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 CXorf56Q9H5V9 222 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 JMJD4Q9H9V9 463 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 ANKIB1Q9P2G1 1089 aa19.23■□□□□ 0.67
SDCBP-202ENST00000413219 NOVA2Q9UNW9 492 aaKnown RBP19.23■□□□□ 0.67
SDCBP-202ENST00000413219 DIS3Q9Y2L1 958 aaKnown RBP19.23■□□□□ 0.67
SDCBP-202ENST00000413219 LOC102724159A0A0B4J2E5 919 aa19.22■□□□□ 0.67
SDCBP-202ENST00000413219 TMCO5BA8MYB1 307 aa19.22■□□□□ 0.67
SDCBP-202ENST00000413219 F8VZ95 297 aa19.22■□□□□ 0.67
SDCBP-202ENST00000413219 CCDC172P0C7W6 258 aa19.22■□□□□ 0.67
SDCBP-202ENST00000413219 JAM2P57087 298 aa19.22■□□□□ 0.67
SDCBP-202ENST00000413219 PWP2Q15269 919 aaKnown RBP19.22■□□□□ 0.67
SDCBP-202ENST00000413219 PPP2R5EQ16537 467 aa19.22■□□□□ 0.67
SDCBP-202ENST00000413219 PREPLQ4J6C6 727 aaPredicted RBP19.22■□□□□ 0.67
SDCBP-202ENST00000413219 C10orf71Q711Q0 1435 aa19.22■□□□□ 0.67
SDCBP-202ENST00000413219 NT5DC3Q86UY8 548 aa19.22■□□□□ 0.67
SDCBP-202ENST00000413219 MAGEC3Q8TD91 643 aa19.22■□□□□ 0.67
SDCBP-202ENST00000413219 TLCD1Q96CP7 247 aa19.22■□□□□ 0.67
SDCBP-202ENST00000413219 JPH2Q9BR39 696 aaPredicted RBP19.22■□□□□ 0.67
SDCBP-202ENST00000413219 METTL14Q9HCE5 456 aaKnown RBP19.22■□□□□ 0.67
SDCBP-202ENST00000413219 CNOT8Q9UFF9 292 aaKnown RBP19.22■□□□□ 0.67
SDCBP-202ENST00000413219 AMACRQ9UHK6 382 aa19.22■□□□□ 0.67
SDCBP-202ENST00000413219 UTP11Q9Y3A2 253 aaKnown RBP19.22■□□□□ 0.67
SDCBP-202ENST00000413219 PPFIA2O75334 1257 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 FLT3P36888 993 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 SLC12A3P55017 1021 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 RHBDL3P58872 404 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 POU5F1Q01860 360 aaKnown RBP19.21■□□□□ 0.67
SDCBP-202ENST00000413219 EPHA7Q15375 998 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 QPCTQ16769 361 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 GPATCH11Q8N954 259 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 RBM46Q8TBY0 533 aaKnown RBP19.21■□□□□ 0.67
SDCBP-202ENST00000413219 PSMD1Q99460 953 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 GLT8D2Q9H1C3 349 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 DHX36Q9H2U1 1008 aaKnown RBP19.21■□□□□ 0.67
SDCBP-202ENST00000413219 GOLPH3Q9H4A6 298 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 BCCIPQ9P287 314 aaKnown RBP eCLIP19.21■□□□□ 0.67
SDCBP-202ENST00000413219 ZNF335Q9H4Z2 1342 aaPredicted RBP19.21■□□□□ 0.67
SDCBP-202ENST00000413219 IGKV6D-41A0A0C4DH26 115 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 NPHP3-ACAD11A0A0J9YXS1 232 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 POTEB3A0JP26 581 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 POTECB2RU33 542 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 PDXKO00764 312 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 KRT18P05783 430 aaKnown RBP19.21■□□□□ 0.67
SDCBP-202ENST00000413219 GHRP10912 638 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 XRCC5P13010 732 aaKnown RBP19.21■□□□□ 0.67
SDCBP-202ENST00000413219 TMOD1P28289 359 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 ZNF543Q08ER8 600 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 KNOP1Q1ED39 458 aaKnown RBP19.21■□□□□ 0.67
SDCBP-202ENST00000413219 ARSHQ5FYA8 562 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 GKAP1Q5VSY0 366 aaPredicted RBP19.21■□□□□ 0.67
SDCBP-202ENST00000413219 POTEBQ6S5H4 581 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 SLF2Q8IX21 1173 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 TXLNGYQ9BZA5 131 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 RAB17Q9H0T7 212 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 KCNMB3Q9NPA1 279 aa19.21■□□□□ 0.67
SDCBP-202ENST00000413219 ATF5Q9Y2D1 282 aaPredicted RBP19.21■□□□□ 0.67
SDCBP-202ENST00000413219 GTPBP10A4D1E9 387 aaKnown RBP19.2■□□□□ 0.66
SDCBP-202ENST00000413219 SLC16A3O15427 465 aaKnown RBP19.2■□□□□ 0.66
SDCBP-202ENST00000413219 TTI1O43156 1089 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 CALUO43852 315 aaPredicted RBP19.2■□□□□ 0.66
SDCBP-202ENST00000413219 ITGA4P13612 1032 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 FERP16591 822 aa19.2■□□□□ 0.66
SDCBP-202ENST00000413219 MAGOHP61326 146 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms