RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 IPO5O00410 1097 aaKnown RBP25.36■■□□□ 1.65
MSH6-202ENST00000411819 ATG7O95352 703 aa25.36■■□□□ 1.65
MSH6-202ENST00000411819 PDIA3P30101 505 aaKnown RBP25.36■■□□□ 1.65
MSH6-202ENST00000411819 SLC26A2P50443 739 aa25.36■■□□□ 1.65
MSH6-202ENST00000411819 NTRK3Q16288 839 aa25.36■■□□□ 1.65
MSH6-202ENST00000411819 IER5Q5VY09 327 aa25.36■■□□□ 1.65
MSH6-202ENST00000411819 RUFY3Q7L099 469 aa25.36■■□□□ 1.65
MSH6-202ENST00000411819 CCDC60Q8IWA6 550 aaPredicted RBP25.36■■□□□ 1.65
MSH6-202ENST00000411819 BICD2Q8TD16 824 aa25.36■■□□□ 1.65
MSH6-202ENST00000411819 CRYGNQ8WXF5 182 aa25.36■■□□□ 1.65
MSH6-202ENST00000411819 HLA-CQ95604 372 aa25.36■■□□□ 1.65
MSH6-202ENST00000411819 SAMD11Q96NU1 681 aa25.36■■□□□ 1.65
MSH6-202ENST00000411819 ZNF302Q9NR11 478 aa25.36■■□□□ 1.65
MSH6-202ENST00000411819 VPS54Q9P1Q0 977 aa25.36■■□□□ 1.65
MSH6-202ENST00000411819 TRPV2Q9Y5S1 764 aa25.36■■□□□ 1.65
MSH6-202ENST00000411819 RALGAPA2Q2PPJ7 1873 aa25.36■■□□□ 1.65
MSH6-202ENST00000411819 IFNAR1P17181 557 aa25.35■■□□□ 1.65
MSH6-202ENST00000411819 CD52P31358 61 aa25.35■■□□□ 1.65
MSH6-202ENST00000411819 EPC2Q52LR7 807 aa25.35■■□□□ 1.65
MSH6-202ENST00000411819 MIS18BP1Q6P0N0 1132 aa25.35■■□□□ 1.65
MSH6-202ENST00000411819 ABHD15Q6UXT9 468 aa25.35■■□□□ 1.65
MSH6-202ENST00000411819 PCDHA2Q9Y5H9 948 aa25.35■■□□□ 1.65
MSH6-202ENST00000411819 CYP46A1Q9Y6A2 500 aa25.35■■□□□ 1.65
MSH6-202ENST00000411819 IGKV6D-21A0A0A0MT36 114 aa25.34■■□□□ 1.65
MSH6-202ENST00000411819 TOB2Q14106 344 aaPredicted RBP25.34■■□□□ 1.65
MSH6-202ENST00000411819 PRR16Q569H4 304 aa25.34■■□□□ 1.65
MSH6-202ENST00000411819 PDXDC2PQ6P474 469 aa25.34■■□□□ 1.65
MSH6-202ENST00000411819 MYH9P35579 1960 aaKnown RBP25.34■■□□□ 1.65
MSH6-202ENST00000411819 DHX15O43143 795 aaKnown RBP25.33■■□□□ 1.65
MSH6-202ENST00000411819 EPB41L2O43491 1005 aaKnown RBP25.33■■□□□ 1.65
MSH6-202ENST00000411819 HBP1O60381 514 aa25.33■■□□□ 1.65
MSH6-202ENST00000411819 SWSAP1Q6NVH7 229 aa25.33■■□□□ 1.65
MSH6-202ENST00000411819 MTHFD1LQ6UB35 978 aa25.33■■□□□ 1.65
MSH6-202ENST00000411819 CKAP2LQ8IYA6 745 aa25.33■■□□□ 1.65
MSH6-202ENST00000411819 TRIM22Q8IYM9 498 aa25.33■■□□□ 1.65
MSH6-202ENST00000411819 ATP8B4Q8TF62 1192 aa25.33■■□□□ 1.65
MSH6-202ENST00000411819 IL17RAQ96F46 866 aa25.33■■□□□ 1.65
MSH6-202ENST00000411819 AGO3Q9H9G7 860 aaKnown RBP25.33■■□□□ 1.65
MSH6-202ENST00000411819 ZSWIM6Q9HCJ5 1215 aa25.33■■□□□ 1.65
MSH6-202ENST00000411819 TBC1D22BQ9NU19 505 aa25.33■■□□□ 1.65
MSH6-202ENST00000411819 SMIM35A0A1B0GVV1 85 aa25.32■■□□□ 1.64
MSH6-202ENST00000411819 BMP1P13497 986 aa25.32■■□□□ 1.64
MSH6-202ENST00000411819 EVCP57679 992 aa25.32■■□□□ 1.64
MSH6-202ENST00000411819 TMEM192Q8IY95 271 aa25.32■■□□□ 1.64
MSH6-202ENST00000411819 FIBCD1Q8N539 461 aa25.32■■□□□ 1.64
MSH6-202ENST00000411819 NECAB3Q96P71 396 aaPredicted RBP25.32■■□□□ 1.64
MSH6-202ENST00000411819 UPF3BQ9BZI7 483 aaKnown RBP25.32■■□□□ 1.64
MSH6-202ENST00000411819 ADGRA3Q8IWK6 1321 aa25.32■■□□□ 1.64
MSH6-202ENST00000411819 XIRP2A4UGR9 3374 aa25.31■■□□□ 1.64
MSH6-202ENST00000411819 ENPP3O14638 875 aa25.31■■□□□ 1.64
MSH6-202ENST00000411819 CPLX1O14810 134 aa25.31■■□□□ 1.64
MSH6-202ENST00000411819 KLRC1P26715 233 aa25.31■■□□□ 1.64
MSH6-202ENST00000411819 NLRP5P59047 1200 aa25.31■■□□□ 1.64
MSH6-202ENST00000411819 PAK2Q13177 524 aa25.31■■□□□ 1.64
MSH6-202ENST00000411819 GPM6BQ13491 265 aa25.31■■□□□ 1.64
MSH6-202ENST00000411819 PTPROQ16827 1216 aa25.31■■□□□ 1.64
MSH6-202ENST00000411819 ZNF746Q6NUN9 644 aaPredicted RBP25.31■■□□□ 1.64
MSH6-202ENST00000411819 TRMT1LQ7Z2T5 733 aaKnown RBP25.31■■□□□ 1.64
MSH6-202ENST00000411819 LARP6Q9BRS8 491 aaKnown RBP25.31■■□□□ 1.64
MSH6-202ENST00000411819 CELF4Q9BZC1 486 aaKnown RBP25.31■■□□□ 1.64
MSH6-202ENST00000411819 GINS2Q9Y248 185 aa25.31■■□□□ 1.64
MSH6-202ENST00000411819 BRWD1Q9NSI6 2320 aa25.31■■□□□ 1.64
MSH6-202ENST00000411819 COL1A2P08123 1366 aa25.31■■□□□ 1.64
MSH6-202ENST00000411819 TTC3P53804 2025 aa25.3■■□□□ 1.64
MSH6-202ENST00000411819 EVPLQ92817 2033 aa25.3■■□□□ 1.64
MSH6-202ENST00000411819 CTNNB1P35222 781 aa25.3■■□□□ 1.64
MSH6-202ENST00000411819 KRT76Q01546 638 aa25.3■■□□□ 1.64
MSH6-202ENST00000411819 SSRP1Q08945 709 aaKnown RBP25.3■■□□□ 1.64
MSH6-202ENST00000411819 STK3Q13188 491 aa25.3■■□□□ 1.64
MSH6-202ENST00000411819 MRPL38Q96DV4 380 aaKnown RBP25.3■■□□□ 1.64
MSH6-202ENST00000411819 SAMM50Q9Y512 469 aa25.3■■□□□ 1.64
MSH6-202ENST00000411819 SQORQ9Y6N5 450 aa25.3■■□□□ 1.64
MSH6-202ENST00000411819 IGSF9BQ9UPX0 1349 aa25.3■■□□□ 1.64
MSH6-202ENST00000411819 NCOR1O75376 2440 aa25.29■■□□□ 1.64
MSH6-202ENST00000411819 PSAPP07602 524 aa25.29■■□□□ 1.64
MSH6-202ENST00000411819 ZNF484Q5JVG2 852 aa25.29■■□□□ 1.64
MSH6-202ENST00000411819 SMAP1Q8IYB5 467 aaPredicted RBP25.29■■□□□ 1.64
MSH6-202ENST00000411819 NME8Q8N427 588 aa25.29■■□□□ 1.64
MSH6-202ENST00000411819 LINC01599Q8WXQ3 324 aa25.29■■□□□ 1.64
MSH6-202ENST00000411819 FTHL17Q9BXU8 183 aa25.29■■□□□ 1.64
MSH6-202ENST00000411819 SH3GLB2Q9NR46 395 aa25.29■■□□□ 1.64
MSH6-202ENST00000411819 PADI3Q9ULW8 664 aa25.29■■□□□ 1.64
MSH6-202ENST00000411819 MUC3AQ02505 3323 aa25.29■■□□□ 1.64
MSH6-202ENST00000411819 WDR81Q562E7 1941 aa25.28■■□□□ 1.64
MSH6-202ENST00000411819 H3BNC9 293 aa25.28■■□□□ 1.64
MSH6-202ENST00000411819 CIITAP33076 1130 aa25.28■■□□□ 1.64
MSH6-202ENST00000411819 BTG3Q14201 252 aaPredicted RBP25.28■■□□□ 1.64
MSH6-202ENST00000411819 TM6SF1Q9BZW5 370 aa25.28■■□□□ 1.64
MSH6-202ENST00000411819 UBE2ZQ9H832 354 aaPredicted RBP25.28■■□□□ 1.64
MSH6-202ENST00000411819 PCDHA10Q9Y5I2 948 aa25.28■■□□□ 1.64
MSH6-202ENST00000411819 ATP4AP20648 1035 aa25.27■■□□□ 1.64
MSH6-202ENST00000411819 IBSPP21815 317 aaPredicted RBP25.27■■□□□ 1.64
MSH6-202ENST00000411819 TMEM266Q2M3C6 531 aa25.27■■□□□ 1.64
MSH6-202ENST00000411819 TIGD5Q53EQ6 642 aa25.27■■□□□ 1.64
MSH6-202ENST00000411819 CPLX2Q6PUV4 134 aaKnown RBP25.27■■□□□ 1.64
MSH6-202ENST00000411819 BBXQ8WY36 941 aaPredicted RBP25.27■■□□□ 1.64
MSH6-202ENST00000411819 LENG9Q96B70 501 aa25.27■■□□□ 1.64
MSH6-202ENST00000411819 ZNF274Q96GC6 653 aaPredicted RBP25.27■■□□□ 1.64
MSH6-202ENST00000411819 PPP1R16BQ96T49 567 aa25.27■■□□□ 1.64
MSH6-202ENST00000411819 PDRG1Q9NUG6 133 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms