RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 OTOP3Q7RTS5 596 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 NLRX1Q86UT6 975 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 FCHSD1Q86WN1 690 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 IQCA1Q86XH1 822 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 TRIM50Q86XT4 487 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZDHHC14Q8IZN3 488 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 MIER1Q8N108 512 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 GPR161Q8N6U8 529 aaKnown RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 MRPL43Q8N983 215 aaKnown RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 DTWD2Q8NBA8 298 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 COLGALT1Q8NBJ5 622 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 TMEM87AQ8NBN3 555 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 GIMAP8Q8ND71 665 aaPredicted RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 PNMA1Q8ND90 353 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 IL31RAQ8NI17 732 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 DNAJB3Q8WWF6 145 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 SEPT1Q8WYJ6 367 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 MRPS27Q92552 414 aaKnown RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 ESR2Q92731 530 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 GLG1Q92896 1179 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 GPKOWQ92917 476 aaPredicted RBP eCLIP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 ACSF2Q96CM8 615 aaPredicted RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 BORCS6Q96GS4 357 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZFP91Q96JP5 570 aaPredicted RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 INPP4AQ96PE3 977 aaPredicted RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 TCF25Q9BQ70 676 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 SENP7Q9BQF6 1050 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 SMOC2Q9H3U7 446 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 SMARCAD1Q9H4L7 1026 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 RNF41Q9H4P4 317 aaPredicted RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 POMKQ9H5K3 350 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 BCAS3Q9H6U6 928 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 DCTPP1Q9H773 170 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 KAT14Q9H8E8 782 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 AGO3Q9H9G7 860 aaKnown RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 JMJD4Q9H9V9 463 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 ENTPD7Q9NQZ7 604 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 CYP26B1Q9NR63 512 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 HELLSQ9NRZ9 838 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 C1orf112Q9NSG2 853 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 TYW1Q9NV66 732 aaKnown RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 ERAP1Q9NZ08 941 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 WNT16Q9UBV4 365 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 TUBE1Q9UJT0 475 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 DBR1Q9UK59 544 aaKnown RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 FBXL21Q9UKT6 434 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 PADI3Q9ULW8 664 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 USTQ9Y2C2 406 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 SUPT16HQ9Y5B9 1047 aaKnown RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 PCDHB7Q9Y5E2 793 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 TRPV2Q9Y5S1 764 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 FLNBO75369 2602 aaKnown RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 F5P12259 2224 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 CACNA1IQ9P0X4 2223 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 TTC3P53804 2025 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 SIP14410 1827 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 ASXL3Q9C0F0 2248 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 IGSF9BQ9UPX0 1349 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 KDM3AQ9Y4C1 1321 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 VPS13AQ96RL7 3174 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 DENND3A2RUS2 1198 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 HIDE1A8MVS5 230 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 PRR5-ARHGAP8B1AHC4 643 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 KLRF2D3W0D1 207 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 CCER2I3L3R5 266 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 OPLAHO14841 1288 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 GPR182O15218 404 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 HOXA2O43364 376 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 KINO60870 393 aaKnown RBP2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 WEE2P0C1S8 567 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 INSRRP14616 1297 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 NPR3P17342 541 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 RFX1P22670 979 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 MARK3P27448 753 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 PDE4AP27815 886 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 CA8P35219 290 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 TCF7P36402 384 aaPredicted RBP2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 GATMP50440 423 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 HAND2P61296 217 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 IGBP1P78318 339 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 MRPS9P82933 396 aaKnown RBP2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 ARHGAP8P85298 464 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 KRT76Q01546 638 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 TBC1D8BQ0IIM8 1120 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 APOBRQ0VD83 1088 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 SEMA3FQ13275 785 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 GIT2Q14161 759 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 SMC1AQ14683 1233 aaKnown RBP2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 NONOQ15233 471 aaKnown RBP eCLIP2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 RSPO4Q2I0M5 234 aaPredicted RBP2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 MCMDC2Q4G0Z9 681 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 MARCH8Q5T0T0 291 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 RARS2Q5T160 578 aaKnown RBP2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 FAM102BQ5T8I3 360 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 KIAA1841Q6NSI8 718 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 XRRA1Q6P2D8 792 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 KCNT2Q6UVM3 1135 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 CCDC149Q6ZUS6 474 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 HOMER1Q86YM7 354 aa2.73□□□□□ -1.97
RNU4-53P-201ENST00000410828 ABI1Q8IZP0 508 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms