RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 KIF18BQ86Y91 864 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 PASD1Q8IV76 773 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ZNF513Q8N8E2 541 aaPredicted RBP3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 LINC00482Q8N8I6 264 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 OR2W6PQ8NHA6 318 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CPA5Q8WXQ8 436 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 USP7Q93009 1102 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CCDC136Q96JN2 1154 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 PHF20Q9BVI0 1012 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 SLC12A9Q9BXP2 914 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 IFT57Q9NWB7 429 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TIMM13Q9Y5L4 95 aaPredicted RBP3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ERCC6L2Q5T890 1561 aa3.55□□□□□ -1.84
RNU6-1140P-201ENST00000410517 MAPKBP1O60336 1514 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CCDC88BA6NC98 1476 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 FHAD1B1AJZ9 1412 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 PRDM2Q13029 1718 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 PATE3B3GLJ2 98 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 NARSO43776 548 aaKnown RBP3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 HIP1RO75146 1068 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 VIL1P09327 827 aaKnown RBP3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 PLS3P13797 630 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 IFNGR1P15260 489 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 GRK2P25098 689 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 THBS2P35442 1172 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 GRK3P35626 688 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 STAT3P40763 770 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CTSKP43235 329 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 SCNN1BP51168 640 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 LSAMPQ13449 338 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ARHGAP44Q17R89 818 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 NRN1LQ496H8 165 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 MROH9Q5TGP6 573 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CNNM4Q6P4Q7 775 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 RNF207Q6ZRF8 634 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 BRAPQ7Z569 592 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 LRRTM3Q86VH5 581 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 GLCCI1Q86VQ1 547 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 GSTCDQ8NEC7 633 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 NEU4Q8WWR8 484 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 OSBP2Q969R2 916 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ZNF503Q96F45 646 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TMEM169Q96HH4 297 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 FCRL3Q96P31 734 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 GORASP1Q9BQQ3 440 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 AP5M1Q9H0R1 490 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 APOBEC2Q9Y235 224 aaKnown RBP3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 NPFFR2Q9Y5X5 522 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 WIZO95785 1651 aa3.54□□□□□ -1.84
RNU6-1140P-201ENST00000410517 NUP160Q12769 1436 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 WRNQ14191 1432 aaPredicted RBP eCLIP3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 DDX3XO00571 662 aaKnown RBP eCLIP3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ULK1O75385 1050 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 DGKIO75912 1065 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 RAPGEF3O95398 923 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CYP2C8P10632 490 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 POU3F2P20265 443 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 MASP1P48740 699 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 DHCR24Q15392 516 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CRY1Q16526 586 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CFAP100Q494V2 611 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CYP4F22Q6NT55 531 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 LBX2Q6XYB7 198 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 DCP2Q8IU60 420 aaKnown RBP3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 DHX37Q8IY37 1157 aaKnown RBP3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 NLGN4XQ8N0W4 816 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ATL2Q8NHH9 583 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 NPLOC4Q8TAT6 608 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 Q8TCH9 128 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 FBXW5Q969U6 566 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TSPAN17Q96FV3 270 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 WNK4Q96J92 1243 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TTC1Q99614 292 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 C11orf84Q9BUA3 381 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CELF4Q9BZC1 486 aaKnown RBP3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 EPB41L1Q9H4G0 881 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 SLC52A2Q9HAB3 445 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 PCDH12Q9NPG4 1184 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CLEC1BQ9P126 229 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 ABCA10Q8WWZ4 1543 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 GRIN2AQ12879 1464 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 TEX14Q8IWB6 1497 aa3.53□□□□□ -1.84
RNU6-1140P-201ENST00000410517 CHD1O14646 1710 aa3.53□□□□□ -1.85
RNU6-1140P-201ENST00000410517 MAFGO15525 162 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 TBX1O43435 398 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ZEB2O60315 1214 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SOD2P04179 222 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 GNAT1P11488 350 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PPP2CBP62714 309 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PPP2CAP67775 309 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ZNF174Q15697 407 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 TKFCQ3LXA3 575 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 LSM12Q3MHD2 195 aaKnown RBP3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 RTP2Q5QGT7 225 aa3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 YOD1Q5VVQ6 348 aaPredicted RBP3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 RNF219Q5W0B1 726 aaPredicted RBP3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ZCCHC8Q6NZY4 707 aaKnown RBP3.52□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ARHGEF18Q6ZSZ5 1173 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms