RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 GNL2Q13823 731 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 RSPH3Q86UC2 560 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 ZBTB10Q96DT7 871 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 KIF3AQ9Y496 699 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 SLC4A7Q9Y6M7 1214 aa20.24■□□□□ 0.83
PDLIM2-206ENST00000409141 TBX3O15119 743 aa20.23■□□□□ 0.83
PDLIM2-206ENST00000409141 BAG4O95429 457 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-206ENST00000409141 CXCL10P02778 98 aa20.23■□□□□ 0.83
PDLIM2-206ENST00000409141 MBTPS1Q14703 1052 aa20.23■□□□□ 0.83
PDLIM2-206ENST00000409141 ZNF484Q5JVG2 852 aa20.23■□□□□ 0.83
PDLIM2-206ENST00000409141 FAM109BQ6ICB4 259 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-206ENST00000409141 POTEDQ86YR6 584 aa20.23■□□□□ 0.83
PDLIM2-206ENST00000409141 RDM1Q8NG50 284 aa20.23■□□□□ 0.83
PDLIM2-206ENST00000409141 DNAJB3Q8WWF6 145 aa20.23■□□□□ 0.83
PDLIM2-206ENST00000409141 BBXQ8WY36 941 aaPredicted RBP20.23■□□□□ 0.83
PDLIM2-206ENST00000409141 MTHFD1LQ6UB35 978 aa20.22■□□□□ 0.83
PDLIM2-206ENST00000409141 B3GNT9Q6UX72 402 aa20.22■□□□□ 0.83
PDLIM2-206ENST00000409141 RPAINQ86UA6 219 aa20.22■□□□□ 0.83
PDLIM2-206ENST00000409141 HAS1Q92839 578 aa20.22■□□□□ 0.83
PDLIM2-206ENST00000409141 FAM49AQ9H0Q0 323 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-206ENST00000409141 FOXP1Q9H334 677 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-206ENST00000409141 NRBP2Q9NSY0 501 aa20.22■□□□□ 0.83
PDLIM2-206ENST00000409141 GRXCR1A8MXD5 290 aa20.21■□□□□ 0.83
PDLIM2-206ENST00000409141 ATP2B1P20020 1258 aa20.21■□□□□ 0.83
PDLIM2-206ENST00000409141 KLRC1P26715 233 aa20.21■□□□□ 0.83
PDLIM2-206ENST00000409141 FAM26DQ5JW98 314 aa20.21■□□□□ 0.83
PDLIM2-206ENST00000409141 CNKSR3Q6P9H4 555 aa20.21■□□□□ 0.83
PDLIM2-206ENST00000409141 SLFN12Q8IYM2 578 aa20.21■□□□□ 0.83
PDLIM2-206ENST00000409141 FAM167AQ96KS9 214 aa20.21■□□□□ 0.83
PDLIM2-206ENST00000409141 PCDHA2Q9Y5H9 948 aa20.21■□□□□ 0.83
PDLIM2-206ENST00000409141 TANC1Q9C0D5 1861 aa20.21■□□□□ 0.83
PDLIM2-206ENST00000409141 COL1A2P08123 1366 aa20.21■□□□□ 0.83
PDLIM2-206ENST00000409141 IGSF9BQ9UPX0 1349 aa20.2■□□□□ 0.82
PDLIM2-206ENST00000409141 RPLP2P05387 115 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-206ENST00000409141 UGCGQ16739 394 aa20.2■□□□□ 0.82
PDLIM2-206ENST00000409141 DEFB123Q8N688 67 aa20.2■□□□□ 0.82
PDLIM2-206ENST00000409141 TET1Q8NFU7 2136 aa20.2■□□□□ 0.82
PDLIM2-206ENST00000409141 ZNF862O60290 1169 aa20.19■□□□□ 0.82
PDLIM2-206ENST00000409141 BAIAP3O94812 1187 aa20.19■□□□□ 0.82
PDLIM2-206ENST00000409141 SLC34A2O95436 690 aa20.19■□□□□ 0.82
PDLIM2-206ENST00000409141 CHRNA1P02708 482 aa20.19■□□□□ 0.82
PDLIM2-206ENST00000409141 OATP04181 439 aa20.19■□□□□ 0.82
PDLIM2-206ENST00000409141 GJB2P29033 226 aa20.19■□□□□ 0.82
PDLIM2-206ENST00000409141 PPP2R5CQ13362 524 aa20.19■□□□□ 0.82
PDLIM2-206ENST00000409141 Q7L0L9 218 aa20.19■□□□□ 0.82
PDLIM2-206ENST00000409141 NOSTRINQ8IVI9 506 aa20.19■□□□□ 0.82
PDLIM2-206ENST00000409141 VAV3Q9UKW4 847 aa20.19■□□□□ 0.82
PDLIM2-206ENST00000409141 SMC3Q9UQE7 1217 aa20.19■□□□□ 0.82
PDLIM2-206ENST00000409141 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.19■□□□□ 0.82
PDLIM2-206ENST00000409141 SMIM35A0A1B0GVV1 85 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 ZBTB42B2RXF5 422 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 RBAK-RBAKDNI3L0D1 243 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 EML1O00423 815 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 WNT7AO00755 349 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 NEMFO60524 1076 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 ATP2A2P16615 1042 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 PRKCEQ02156 737 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 IKBKEQ14164 716 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 CALCRLQ16602 461 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 DBF4BQ8NFT6 615 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 CEP131Q9UPN4 1083 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 MYH9P35579 1960 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 MCM7P33993 719 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 KCNJ6P48051 423 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 MRPS6P82932 125 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 TCTN1Q2MV58 587 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 ZNF697Q5TEC3 545 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 IER5Q5VY09 327 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 NME8Q8N427 588 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 BANK1Q8NDB2 785 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 SEPT8Q92599 483 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 PBX4Q9BYU1 374 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 OSBPL7Q9BZF2 842 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 MSRAQ9UJ68 235 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 PCDHA12Q9UN75 941 aa20.18■□□□□ 0.82
PDLIM2-206ENST00000409141 ABHD14A-ACY1A0A1B0GW23 586 aa20.17■□□□□ 0.82
PDLIM2-206ENST00000409141 KIF28PB7ZC32 967 aa20.17■□□□□ 0.82
PDLIM2-206ENST00000409141 M0QZ92 97 aa20.17■□□□□ 0.82
PDLIM2-206ENST00000409141 DNAJB2P25686 324 aa20.17■□□□□ 0.82
PDLIM2-206ENST00000409141 U2AF2P26368 475 aaKnown RBP eCLIP20.17■□□□□ 0.82
PDLIM2-206ENST00000409141 PBX2P40425 430 aa20.17■□□□□ 0.82
PDLIM2-206ENST00000409141 PSMC5P62195 406 aa20.17■□□□□ 0.82
PDLIM2-206ENST00000409141 MGAT3Q09327 533 aa20.17■□□□□ 0.82
PDLIM2-206ENST00000409141 TMEM62Q0P6H9 643 aa20.17■□□□□ 0.82
PDLIM2-206ENST00000409141 PLEKHG4Q58EX7 1191 aa20.17■□□□□ 0.82
PDLIM2-206ENST00000409141 NCAPH2Q6IBW4 605 aa20.17■□□□□ 0.82
PDLIM2-206ENST00000409141 PHOSPHO2Q8TCD6 241 aa20.17■□□□□ 0.82
PDLIM2-206ENST00000409141 CDY2AQ9Y6F7 541 aa20.17■□□□□ 0.82
PDLIM2-206ENST00000409141 SZT2Q5T011 3432 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 H3BQV1 296 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 MAGEB2O15479 319 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 EFCAB14O75071 495 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 C22orf31O95567 290 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 TXKP42681 527 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 WDR5P61964 334 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 EPHA7Q15375 998 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 ZNF174Q15697 407 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 RAB30Q15771 203 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 XKR3Q5GH77 459 aa20.16■□□□□ 0.82
PDLIM2-206ENST00000409141 MCTP1Q6DN14 999 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms