RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 NT5DC1Q5TFE4 455 aa6.69□□□□□ -1.34
HMGB1P13-201ENST00000406019 CNNM4Q6P4Q7 775 aa6.69□□□□□ -1.34
HMGB1P13-201ENST00000406019 LILRA6Q6PI73 481 aa6.69□□□□□ -1.34
HMGB1P13-201ENST00000406019 FMNL3Q8IVF7 1028 aa6.69□□□□□ -1.34
HMGB1P13-201ENST00000406019 ZC3H7AQ8IWR0 971 aaKnown RBP6.69□□□□□ -1.34
HMGB1P13-201ENST00000406019 TEPSINQ96N21 525 aa6.69□□□□□ -1.34
HMGB1P13-201ENST00000406019 ADAM7Q9H2U9 754 aa6.69□□□□□ -1.34
HMGB1P13-201ENST00000406019 KCND1Q9NSA2 647 aa6.69□□□□□ -1.34
HMGB1P13-201ENST00000406019 DDX3XO00571 662 aaKnown RBP eCLIP6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 KCNK3O14649 394 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 PRICKLE3O43900 615 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 CLASP2O75122 1294 aaKnown RBP6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 IL18BPO95998 194 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 DNM2P50570 870 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 FAM47CQ5HY64 1035 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 ZFYVE27Q5T4F4 411 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 PHF19Q5T6S3 580 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 VASNQ6EMK4 673 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 DDX46Q7L014 1031 aaKnown RBP6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 OTOP1Q7RTM1 612 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 NLGN4XQ8N0W4 816 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 AHI1Q8N157 1196 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 CISD2Q8N5K1 135 aaKnown RBP6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 TXNDC5Q8NBS9 432 aaKnown RBP6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 DLG3Q92796 817 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 CLIC6Q96NY7 704 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 MTFR1LQ9H019 292 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 BTBD7Q9P203 1132 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 EID1Q9Y6B2 187 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 ATP23Q9Y6H3 246 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 PHLDB1Q86UU1 1377 aa6.68□□□□□ -1.34
HMGB1P13-201ENST00000406019 KLHL18O94889 574 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 MPIG6BO95866 241 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 KNG1P01042 644 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 ASLP04424 464 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 KRT15P19012 456 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 IL13P35225 146 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 CTSWP56202 376 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 PFKPQ01813 784 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 DHCR24Q15392 516 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 CRY1Q16526 586 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 SKIDA1Q1XH10 827 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 TMEM177Q53S58 311 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 BTBD8Q5XKL5 378 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 PKN3Q6P5Z2 889 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 RAVER1Q8IY67 606 aaKnown RBP6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 ZDHHC14Q8IZN3 488 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 ATL2Q8NHH9 583 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 WRNIP1Q96S55 665 aa6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 TNPO3Q9Y5L0 923 aaKnown RBP6.67□□□□□ -1.34
HMGB1P13-201ENST00000406019 C9orf118A6NHY6 69 aa6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 GSTA4O15217 222 aa6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 ALDH1L1O75891 902 aa6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 ZBTB48P10074 688 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 CPEP16870 476 aa6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 AOAHP28039 575 aa6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 GJA4P35212 333 aa6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 ST5P78524 1137 aa6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 FAM50AQ14320 339 aaKnown RBP6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 ZNF460Q14592 562 aa6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 PCBP1Q15365 356 aaKnown RBP eCLIP6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 RGL3Q3MIN7 710 aa6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 NECAB2Q7Z6G3 386 aa6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 IGSF22Q8N9C0 903 aa6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 CXorf38Q8TB03 319 aa6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 LEO1Q8WVC0 666 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 B3GALT1Q9Y5Z6 326 aa6.66□□□□□ -1.34
HMGB1P13-201ENST00000406019 RASSF10A6NK89 507 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 GLRX3O76003 335 aaKnown RBP6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 CHGBP05060 677 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 ENO2P09104 434 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 GUCY2FP51841 1108 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 EPHB1P54762 984 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 HERVK_113P62684 666 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 NFIXQ14938 502 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 SEPT7Q16181 437 aaKnown RBP6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 NFE2Q16621 373 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 MCTP2Q6DN12 878 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 ZCCHC8Q6NZY4 707 aaKnown RBP6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 NUDT10Q8NFP7 164 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 IGDCC4Q8TDY8 1250 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 NUDT11Q96G61 164 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 C8orf48Q96LL4 319 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 ASPSCR1Q9BZE9 553 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 SLC39A2Q9NP94 309 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 GEMIN8Q9NWZ8 242 aaKnown RBP6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 ZFP69BQ9UJL9 534 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 CROTQ9UKG9 612 aa6.65□□□□□ -1.34
HMGB1P13-201ENST00000406019 CCDC194A0A1B0GVG4 234 aa6.64□□□□□ -1.35
HMGB1P13-201ENST00000406019 GPR39O43194 453 aa6.64□□□□□ -1.35
HMGB1P13-201ENST00000406019 MC4RP32245 332 aa6.64□□□□□ -1.35
HMGB1P13-201ENST00000406019 IGFALSP35858 605 aa6.64□□□□□ -1.35
HMGB1P13-201ENST00000406019 GJA9P57773 515 aa6.64□□□□□ -1.35
HMGB1P13-201ENST00000406019 MCL1Q07820 350 aa6.64□□□□□ -1.35
HMGB1P13-201ENST00000406019 TTF1Q15361 905 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P13-201ENST00000406019 CPZQ66K79 652 aa6.64□□□□□ -1.35
HMGB1P13-201ENST00000406019 CREB3L3Q68CJ9 461 aa6.64□□□□□ -1.35
HMGB1P13-201ENST00000406019 LHFPL2Q6ZUX7 228 aa6.64□□□□□ -1.35
HMGB1P13-201ENST00000406019 ORAI3Q9BRQ5 295 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms