RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 CUEDC2Q9H467 287 aa15.18■□□□□ 0.02
DUSP28-202ENST00000405954 ZHX3Q9H4I2 956 aa15.18■□□□□ 0.02
DUSP28-202ENST00000405954 FER1L4A9Z1Z3 1794 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 GNAQP50148 359 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 TOB1P50616 345 aaPredicted RBP15.17■□□□□ 0.02
DUSP28-202ENST00000405954 LBRQ14739 615 aaKnown RBP15.17■□□□□ 0.02
DUSP28-202ENST00000405954 KLHDC7AQ5VTJ3 777 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 SNX30Q5VWJ9 437 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 TOM1L2Q6ZVM7 507 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 MIGA2Q7L4E1 593 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 ZNF579Q8NAF0 562 aaKnown RBP15.17■□□□□ 0.02
DUSP28-202ENST00000405954 USP38Q8NB14 1042 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 LPIN2Q92539 896 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 ANKRD27Q96NW4 1050 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 SENP2Q9HC62 589 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 A0A087X0B3 334 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 PMS2P54278 862 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 C6orf118Q5T5N4 469 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 NANOGNBQ7Z5D8 188 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 TRAPPC9Q96Q05 1148 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 IWS1Q96ST2 819 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 AFF2P51816 1311 aa15.17■□□□□ 0.02
DUSP28-202ENST00000405954 MINDY4BA8MYZ0 360 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 CAPN9O14815 690 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 RANBP6O60518 1105 aaKnown RBP15.16■□□□□ 0.02
DUSP28-202ENST00000405954 SPTY2D1Q68D10 685 aaPredicted RBP15.16■□□□□ 0.02
DUSP28-202ENST00000405954 SMC1BQ8NDV3 1235 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 PRPF31Q8WWY3 499 aaKnown RBP15.16■□□□□ 0.02
DUSP28-202ENST00000405954 METTL22Q9BUU2 404 aaPredicted RBP15.16■□□□□ 0.02
DUSP28-202ENST00000405954 FOXP1Q9H334 677 aaPredicted RBP15.16■□□□□ 0.02
DUSP28-202ENST00000405954 ARHGAP20Q9P2F6 1191 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 PDP2Q9P2J9 529 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 ARPP21Q9UBL0 812 aaPredicted RBP15.16■□□□□ 0.02
DUSP28-202ENST00000405954 CACNA1FO60840 1977 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 MAP3K13O43283 966 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 POLR2FP61218 127 aaKnown RBP15.16■□□□□ 0.02
DUSP28-202ENST00000405954 SCARF1Q14162 830 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 PDIA5Q14554 519 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 HLFQ16534 295 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 MB21D2Q8IYB1 491 aaPredicted RBP15.16■□□□□ 0.02
DUSP28-202ENST00000405954 CFAP61Q8NHU2 1237 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 TTC8Q8TAM2 541 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 ZNF653Q96CK0 615 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 MARCH6O60337 910 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 ACSL3O95573 720 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 SRGNP10124 158 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 MYH8P13535 1937 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 TNFRSF8P28908 595 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 EPHB2P29323 1055 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 SLC29A2Q14542 456 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 MFSD6Q6ZSS7 791 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 KRT28Q7Z3Y7 464 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 WDR60Q8WVS4 1066 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 SCG3Q8WXD2 468 aaKnown RBP15.16■□□□□ 0.02
DUSP28-202ENST00000405954 CYP39A1Q9NYL5 469 aa15.16■□□□□ 0.02
DUSP28-202ENST00000405954 V9GY48 417 aaPredicted RBP15.16■□□□□ 0.02
DUSP28-202ENST00000405954 NPHP3-ACAD11A0A0J9YXS1 232 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 F8VZ95 297 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 SNAP23O00161 211 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 VIL1P09327 827 aaKnown RBP15.15■□□□□ 0.02
DUSP28-202ENST00000405954 ZFXP17010 805 aaPredicted RBP15.15■□□□□ 0.02
DUSP28-202ENST00000405954 VPS41P49754 854 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 ANTXR2P58335 489 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 MIS12Q9H081 205 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 LNPEPQ9UIQ6 1025 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 ZNF335Q9H4Z2 1342 aaPredicted RBP15.15■□□□□ 0.02
DUSP28-202ENST00000405954 FGFR4P22455 802 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 UAP1Q16222 522 aaPredicted RBP15.15■□□□□ 0.02
DUSP28-202ENST00000405954 LRRC36Q1X8D7 754 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 TMEM87BQ96K49 555 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 TTC1Q99614 292 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 TSPYL2Q9H2G4 693 aaPredicted RBP15.15■□□□□ 0.02
DUSP28-202ENST00000405954 MYH10P35580 1976 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 GRID2IPA4D2P6 1211 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 ZNF263O14978 683 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 MBD4O95243 580 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 ATF3P18847 181 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 KLRC1P26715 233 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 RFX5P48382 616 aaPredicted RBP15.15■□□□□ 0.02
DUSP28-202ENST00000405954 IGBP1P78318 339 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 NME8Q8N427 588 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 SLC52A2Q9HAB3 445 aa15.15■□□□□ 0.02
DUSP28-202ENST00000405954 DDX18Q9NVP1 670 aaKnown RBP15.15■□□□□ 0.02
DUSP28-202ENST00000405954 NOC2LQ9Y3T9 749 aaKnown RBP15.15■□□□□ 0.02
DUSP28-202ENST00000405954 FAM237AA0A1B0GTK4 181 aa15.14■□□□□ 0.01
DUSP28-202ENST00000405954 LRRC10BA6NIK2 292 aa15.14■□□□□ 0.01
DUSP28-202ENST00000405954 EEF2P13639 858 aaKnown RBP15.14■□□□□ 0.01
DUSP28-202ENST00000405954 CTDSPL2Q05D32 466 aa15.14■□□□□ 0.01
DUSP28-202ENST00000405954 LLGL1Q15334 1064 aa15.14■□□□□ 0.01
DUSP28-202ENST00000405954 EAPPQ56P03 285 aaPredicted RBP15.14■□□□□ 0.01
DUSP28-202ENST00000405954 CYB5R4Q7L1T6 521 aa15.14■□□□□ 0.01
DUSP28-202ENST00000405954 VPS36Q86VN1 386 aa15.14■□□□□ 0.01
DUSP28-202ENST00000405954 AGGF1Q8N302 714 aaeCLIP15.14■□□□□ 0.01
DUSP28-202ENST00000405954 EPS8L3Q8TE67 593 aaKnown RBP15.14■□□□□ 0.01
DUSP28-202ENST00000405954 MPP4Q96JB8 637 aa15.14■□□□□ 0.01
DUSP28-202ENST00000405954 RXFP1Q9HBX9 757 aa15.14■□□□□ 0.01
DUSP28-202ENST00000405954 TMEM120BA0PK00 339 aa15.14■□□□□ 0.01
DUSP28-202ENST00000405954 LMNAP02545 664 aaKnown RBP15.14■□□□□ 0.01
DUSP28-202ENST00000405954 FGGP02679 453 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms