RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 ITGA4P13612 1032 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 ATP2B1P20020 1258 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 PDCP20941 246 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 CTSKP43235 329 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 TERF1P54274 439 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 PCBP3P57721 371 aaKnown RBP7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 TEKQ02763 1124 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 KRT32Q14532 448 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 NCAPHQ15003 741 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 LCE3BQ5TA77 95 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 LARP1BQ659C4 914 aaKnown RBP7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 LMBR1LQ6UX01 489 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 ANKS3Q6ZW76 656 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 ATG9AQ7Z3C6 839 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 TICAM2Q86XR7 235 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 LINC00116Q8NCU8 138 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 CCDC120Q96HB5 630 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 TCEANC2Q96MN5 208 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 DSCC1Q9BVC3 393 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 GPR108Q9NPR9 543 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 SLAMF8Q9P0V8 285 aa7.91□□□□□ -1.14
CSNK2A1-204ENST00000400227 TNS2Q63HR2 1409 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 DNAJC25-GNG10A0A024R161 153 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 ERVV-2B6SEH9 535 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 MEIS1O00470 390 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 CHGBP05060 677 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 FXNQ16595 210 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 MCMDC2Q4G0Z9 681 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 RALGPS1Q5JS13 557 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 CCDC129Q6ZRS4 1044 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 TTLL7Q6ZT98 887 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 HNRNPLLQ8WVV9 542 aaKnown RBP7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 BRF1Q92994 677 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 FOXP3Q9BZS1 431 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 GBP3Q9H0R5 595 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 WHRNQ9P202 907 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 SUSD2Q9UGT4 822 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 TMEM59LQ9UK28 342 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 TCFL5Q9UL49 500 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 ZNF281Q9Y2X9 895 aa7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 R3HCC1Q9Y3T6 440 aaKnown RBP7.9□□□□□ -1.14
CSNK2A1-204ENST00000400227 DDX60Q8IY21 1712 aaKnown RBP7.9□□□□□ -1.15
CSNK2A1-204ENST00000400227 WDR17Q8IZU2 1322 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 KLF4O43474 513 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 STK10O94804 968 aaKnown RBP7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 GSNP06396 782 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 BMP8BP34820 402 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 KRT85P78386 507 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 GIMAP6Q6P9H5 292 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 C6orf15Q6UXA7 325 aaPredicted RBP7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 FAM178BQ8IXR5 827 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 KBTBD3Q8NAB2 608 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 ZCRB1Q8TBF4 217 aaKnown RBP7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 GTF3C6Q969F1 213 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 NEK1Q96PY6 1258 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 SEC62Q99442 399 aaKnown RBP7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 DNAJC2Q99543 621 aaKnown RBP7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 ADAMTS10Q9H324 1103 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 C19orf73Q9NVV2 129 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 CWC25Q9NXE8 425 aaPredicted RBP7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 CTNND2Q9UQB3 1225 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 NWD2Q9ULI1 1742 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 PCDH11XQ9BZA7 1347 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 PCDH11YQ9BZA8 1340 aa7.89□□□□□ -1.15
CSNK2A1-204ENST00000400227 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 SSU72P8A0A1W2PR75 194 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 ANKRD34BA5PLL1 514 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 ADCY5O95622 1261 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 A1BGP04217 495 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 SYPP08247 313 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 CYP21A2P08686 494 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 GDNFP39905 211 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 IL15P40933 162 aaPredicted RBP7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 RESTQ13127 1097 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 CRTC3Q6UUV7 619 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 Q6ZUG5 572 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 STOX1Q6ZVD7 989 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 DDX46Q7L014 1031 aaKnown RBP7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 ATG4DQ86TL0 474 aaPredicted RBP7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 FIBCD1Q8N539 461 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 FLAD1Q8NFF5 587 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 MICAL1Q8TDZ2 1067 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 HELLSQ9NRZ9 838 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.88□□□□□ -1.151e-9■■□□□ 14.1
CSNK2A1-204ENST00000400227 COL5A2P05997 1499 aaPredicted RBP7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 ITGB4P16144 1822 aa7.88□□□□□ -1.15
CSNK2A1-204ENST00000400227 EYA2O00167 538 aa7.87□□□□□ -1.15
CSNK2A1-204ENST00000400227 AP5Z1O43299 807 aa7.87□□□□□ -1.15
CSNK2A1-204ENST00000400227 JAK2O60674 1132 aa7.87□□□□□ -1.15
CSNK2A1-204ENST00000400227 PFKFB2O60825 505 aa7.87□□□□□ -1.15
CSNK2A1-204ENST00000400227 CIAO1O76071 339 aa7.87□□□□□ -1.15
CSNK2A1-204ENST00000400227 ZNF143P52747 638 aaPredicted RBP7.87□□□□□ -1.15
CSNK2A1-204ENST00000400227 EXOSC10Q01780 885 aaKnown RBP7.87□□□□□ -1.15
CSNK2A1-204ENST00000400227 STK3Q13188 491 aa7.87□□□□□ -1.15
CSNK2A1-204ENST00000400227 SF3A1Q15459 793 aaKnown RBP7.87□□□□□ -1.15
CSNK2A1-204ENST00000400227 FAM173BQ6P4H8 233 aa7.87□□□□□ -1.15
CSNK2A1-204ENST00000400227 ADAT2Q7Z6V5 191 aaKnown RBP7.87□□□□□ -1.15
CSNK2A1-204ENST00000400227 FERMT3Q86UX7 667 aa7.87□□□□□ -1.15
CSNK2A1-204ENST00000400227 CCDC191Q8NCU4 936 aa7.87□□□□□ -1.15
CSNK2A1-204ENST00000400227 SMARCC2Q8TAQ2 1214 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms