RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 SERINC5Q86VE9 423 aa19.83■□□□□ 0.77
CTNS-203ENST00000399306 LMBR1Q8WVP7 490 aa19.83■□□□□ 0.77
CTNS-203ENST00000399306 AK8Q96MA6 479 aa19.83■□□□□ 0.77
CTNS-203ENST00000399306 CTAGE1Q96RT6 745 aa19.83■□□□□ 0.77
CTNS-203ENST00000399306 EIF2AK1Q9BQI3 630 aaKnown RBP19.83■□□□□ 0.77
CTNS-203ENST00000399306 NIFKQ9BYG3 293 aaKnown RBP19.83■□□□□ 0.77
CTNS-203ENST00000399306 TRPV6Q9H1D0 765 aa19.83■□□□□ 0.77
CTNS-203ENST00000399306 TUFT1Q9NNX1 390 aa19.83■□□□□ 0.77
CTNS-203ENST00000399306 TRMT13Q9NUP7 481 aaKnown RBP19.83■□□□□ 0.77
CTNS-203ENST00000399306 TRPC6Q9Y210 931 aa19.83■□□□□ 0.77
CTNS-203ENST00000399306 NOD1Q9Y239 953 aa19.83■□□□□ 0.77
CTNS-203ENST00000399306 XRCC6P12956 609 aaKnown RBP eCLIP19.82■□□□□ 0.76
CTNS-203ENST00000399306 INSRRP14616 1297 aa19.82■□□□□ 0.76
CTNS-203ENST00000399306 DDIT3P35638 169 aa19.82■□□□□ 0.76
CTNS-203ENST00000399306 TECP42680 631 aa19.82■□□□□ 0.76
CTNS-203ENST00000399306 NASPP49321 788 aaPredicted RBP19.82■□□□□ 0.76
CTNS-203ENST00000399306 PRKCEQ02156 737 aa19.82■□□□□ 0.76
CTNS-203ENST00000399306 BFSP2Q13515 415 aa19.82■□□□□ 0.76
CTNS-203ENST00000399306 GRIK4Q16099 956 aa19.82■□□□□ 0.76
CTNS-203ENST00000399306 TAF2Q6P1X5 1199 aa19.82■□□□□ 0.76
CTNS-203ENST00000399306 CKAP2LQ8IYA6 745 aa19.82■□□□□ 0.76
CTNS-203ENST00000399306 SETD4Q9NVD3 440 aa19.82■□□□□ 0.76
CTNS-203ENST00000399306 ATP6V1DQ9Y5K8 247 aa19.82■□□□□ 0.76
CTNS-203ENST00000399306 SLITRK3O94933 977 aa19.81■□□□□ 0.76
CTNS-203ENST00000399306 STBD1O95210 358 aa19.81■□□□□ 0.76
CTNS-203ENST00000399306 PARNO95453 639 aaKnown RBP19.81■□□□□ 0.76
CTNS-203ENST00000399306 TIMP1P01033 207 aa19.81■□□□□ 0.76
CTNS-203ENST00000399306 RPA1P27694 616 aa19.81■□□□□ 0.76
CTNS-203ENST00000399306 CHMP4BP1P59074 171 aa19.81■□□□□ 0.76
CTNS-203ENST00000399306 NUCB2P80303 420 aa19.81■□□□□ 0.76
CTNS-203ENST00000399306 PTPAQ15257 358 aa19.81■□□□□ 0.76
CTNS-203ENST00000399306 UGCGQ16739 394 aa19.81■□□□□ 0.76
CTNS-203ENST00000399306 EXOC8Q8IYI6 725 aa19.81■□□□□ 0.76
CTNS-203ENST00000399306 LXNQ9BS40 222 aa19.81■□□□□ 0.76
CTNS-203ENST00000399306 LRWD1Q9UFC0 647 aa19.81■□□□□ 0.76
CTNS-203ENST00000399306 TRIM43BA6NCK2 446 aa19.8■□□□□ 0.76
CTNS-203ENST00000399306 POTEMA6NI47 508 aa19.8■□□□□ 0.76
CTNS-203ENST00000399306 MAGEB2O15479 319 aa19.8■□□□□ 0.76
CTNS-203ENST00000399306 YEATS4O95619 227 aa19.8■□□□□ 0.76
CTNS-203ENST00000399306 PKP1Q13835 747 aa19.8■□□□□ 0.76
CTNS-203ENST00000399306 HIC1Q14526 733 aa19.8■□□□□ 0.76
CTNS-203ENST00000399306 SLC39A14Q15043 492 aa19.8■□□□□ 0.76
CTNS-203ENST00000399306 TARBP2Q15633 366 aaKnown RBP19.8■□□□□ 0.76
CTNS-203ENST00000399306 MARCH8Q5T0T0 291 aa19.8■□□□□ 0.76
CTNS-203ENST00000399306 OTUD6AQ7L8S5 288 aa19.8■□□□□ 0.76
CTNS-203ENST00000399306 ZNF710Q8N1W2 664 aa19.8■□□□□ 0.76
CTNS-203ENST00000399306 TRIM43Q96BQ3 446 aaPredicted RBP19.8■□□□□ 0.76
CTNS-203ENST00000399306 DYDC2Q96IM9 177 aa19.8■□□□□ 0.76
CTNS-203ENST00000399306 NOC4LQ9BVI4 516 aaKnown RBP19.8■□□□□ 0.76
CTNS-203ENST00000399306 DAXXQ9UER7 740 aaPredicted RBP19.8■□□□□ 0.76
CTNS-203ENST00000399306 TUBE1Q9UJT0 475 aa19.8■□□□□ 0.76
CTNS-203ENST00000399306 CIZ1Q9ULV3 898 aaPredicted RBP19.8■□□□□ 0.76
CTNS-203ENST00000399306 PCDHA2Q9Y5H9 948 aa19.8■□□□□ 0.76
CTNS-203ENST00000399306 LTBP2Q14767 1821 aa19.8■□□□□ 0.76
CTNS-203ENST00000399306 LOXHD1Q8IVV2 1947 aa19.79■□□□□ 0.76
CTNS-203ENST00000399306 ZBTB42B2RXF5 422 aa19.79■□□□□ 0.76
CTNS-203ENST00000399306 TREHO43280 583 aa19.79■□□□□ 0.76
CTNS-203ENST00000399306 RAG1P15918 1043 aa19.79■□□□□ 0.76
CTNS-203ENST00000399306 LONP1P36776 959 aaKnown RBP19.79■□□□□ 0.76
CTNS-203ENST00000399306 TRIM71Q2Q1W2 868 aaKnown RBP19.79■□□□□ 0.76
CTNS-203ENST00000399306 BANK1Q8NDB2 785 aa19.79■□□□□ 0.76
CTNS-203ENST00000399306 USP28Q96RU2 1077 aa19.79■□□□□ 0.76
CTNS-203ENST00000399306 HIPK3Q9H422 1215 aa19.79■□□□□ 0.76
CTNS-203ENST00000399306 ANKEF1Q9NU02 776 aa19.79■□□□□ 0.76
CTNS-203ENST00000399306 RGL1Q9NZL6 768 aa19.79■□□□□ 0.76
CTNS-203ENST00000399306 CFAP45Q9UL16 551 aa19.79■□□□□ 0.76
CTNS-203ENST00000399306 ZDHHC9Q9Y397 364 aa19.79■□□□□ 0.76
CTNS-203ENST00000399306 SRPRBQ9Y5M8 271 aaKnown RBP19.79■□□□□ 0.76
CTNS-203ENST00000399306 CLIC4Q9Y696 253 aa19.79■□□□□ 0.76
CTNS-203ENST00000399306 SMIM35A0A1B0GVV1 85 aa19.78■□□□□ 0.76
CTNS-203ENST00000399306 SPATA31C1P0DKV0 1188 aa19.78■□□□□ 0.76
CTNS-203ENST00000399306 IL17AQ16552 155 aa19.78■□□□□ 0.76
CTNS-203ENST00000399306 KRT79Q5XKE5 535 aa19.78■□□□□ 0.76
CTNS-203ENST00000399306 MFSD5Q6N075 450 aa19.78■□□□□ 0.76
CTNS-203ENST00000399306 FAM173BQ6P4H8 233 aa19.78■□□□□ 0.76
CTNS-203ENST00000399306 FAM43BQ6ZT52 329 aaPredicted RBP19.78■□□□□ 0.76
CTNS-203ENST00000399306 SH3RF1Q7Z6J0 888 aa19.78■□□□□ 0.76
CTNS-203ENST00000399306 RSPH3Q86UC2 560 aa19.78■□□□□ 0.76
CTNS-203ENST00000399306 NME8Q8N427 588 aa19.78■□□□□ 0.76
CTNS-203ENST00000399306 LINC00301Q8NCQ3 95 aa19.78■□□□□ 0.76
CTNS-203ENST00000399306 JPH2Q9BR39 696 aaPredicted RBP19.78■□□□□ 0.76
CTNS-203ENST00000399306 PRDM5Q9NQX1 630 aaPredicted RBP19.78■□□□□ 0.76
CTNS-203ENST00000399306 EVPLQ92817 2033 aa19.77■□□□□ 0.76
CTNS-203ENST00000399306 PPP6R2O75170 966 aa19.77■□□□□ 0.76
CTNS-203ENST00000399306 CYP2C9P11712 490 aa19.77■□□□□ 0.76
CTNS-203ENST00000399306 RFC2P35250 354 aa19.77■□□□□ 0.76
CTNS-203ENST00000399306 ZNF200P98182 395 aaPredicted RBP19.77■□□□□ 0.76
CTNS-203ENST00000399306 HYIQ5T013 277 aa19.77■□□□□ 0.76
CTNS-203ENST00000399306 MTHFD1LQ6UB35 978 aa19.77■□□□□ 0.76
CTNS-203ENST00000399306 ANO5Q75V66 913 aa19.77■□□□□ 0.76
CTNS-203ENST00000399306 CATSPER3Q86XQ3 398 aa19.77■□□□□ 0.76
CTNS-203ENST00000399306 TPH2Q8IWU9 490 aa19.77■□□□□ 0.76
CTNS-203ENST00000399306 RETREG2Q8NC44 543 aa19.77■□□□□ 0.76
CTNS-203ENST00000399306 DHX38Q92620 1227 aaKnown RBP19.77■□□□□ 0.76
CTNS-203ENST00000399306 NACC1Q96RE7 527 aa19.77■□□□□ 0.76
CTNS-203ENST00000399306 CEP89Q96ST8 783 aa19.77■□□□□ 0.76
CTNS-203ENST00000399306 KDM3AQ9Y4C1 1321 aa19.76■□□□□ 0.75
CTNS-203ENST00000399306 TANC1Q9C0D5 1861 aa19.76■□□□□ 0.75
CTNS-203ENST00000399306 VWA3AA6NCI4 1184 aa19.76■□□□□ 0.75
CTNS-203ENST00000399306 DDX11L8A8MPP1 907 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms