RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 FAM196BA6NMK8 535 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 BUB1O43683 1085 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 RAD21O60216 631 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 PHACTR2O75167 634 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 ENTPD3O75355 529 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 PALMO75781 387 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 EYA4O95677 639 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 FAM228BP0C875 321 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 GAP43P17677 238 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 HOXD13P35453 343 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 GGCXP38435 758 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 PRKCIP41743 596 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 PSMC6P62333 389 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 PABPC4Q13310 644 aaKnown RBP eCLIP12.48□□□□□ -0.418e-28■□□□□ 10.4
C4orf3-201ENST00000399075 SF3B2Q13435 895 aaKnown RBP12.48□□□□□ -0.41
C4orf3-201ENST00000399075 C8orf74Q6P047 294 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 KIAA0825Q8IV33 1275 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 HDAC7Q8WUI4 952 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 DBNDD1Q9H9R9 158 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 OLFML3Q9NRN5 406 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 MSH4O15457 936 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 TRIM37O94972 964 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 BMP3P12645 472 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 RPL13P26373 211 aaKnown RBP12.48□□□□□ -0.41
C4orf3-201ENST00000399075 KLRC1P26715 233 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 CXCR5P32302 372 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 CACNB3P54284 484 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 RAD51AP2Q09MP3 1159 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 SLC15A2Q16348 729 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 FAM133AQ8N9E0 248 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 RBM12Q9NTZ6 932 aaKnown RBP12.48□□□□□ -0.41
C4orf3-201ENST00000399075 GTPBP10A4D1E9 387 aaKnown RBP12.48□□□□□ -0.41
C4orf3-201ENST00000399075 OPLAHO14841 1288 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 XRCC5P13010 732 aaKnown RBP12.48□□□□□ -0.41
C4orf3-201ENST00000399075 NAP1L1P55209 391 aaKnown RBP12.48□□□□□ -0.41
C4orf3-201ENST00000399075 NFIL3Q16649 462 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 KIAA0753Q2KHM9 967 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 ALS2CLQ60I27 953 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 KRT27Q7Z3Y8 459 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 IRF2BP2Q7Z5L9 587 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 SH3GL2Q99962 352 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 ZHX3Q9H4I2 956 aa12.48□□□□□ -0.41
C4orf3-201ENST00000399075 SLX4Q8IY92 1834 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 UCHL3P15374 230 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 EPHA7Q15375 998 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 IFI16Q16666 785 aaKnown RBP12.47□□□□□ -0.41
C4orf3-201ENST00000399075 EXOC3L4Q17RC7 722 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 SND1Q7KZF4 910 aaKnown RBP eCLIP12.47□□□□□ -0.414e-6■■□□□ 12.7
C4orf3-201ENST00000399075 GPIHBP1Q8IV16 184 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 FLAD1Q8NFF5 587 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 AKT1S1Q96B36 256 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 INPP4AQ96PE3 977 aaPredicted RBP12.47□□□□□ -0.41
C4orf3-201ENST00000399075 MYCBPQ99417 103 aaPredicted RBP12.47□□□□□ -0.41
C4orf3-201ENST00000399075 GDF3Q9NR23 364 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 KCNQ5Q9NR82 932 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
C4orf3-201ENST00000399075 ASTN1O14525 1302 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 EIF3DO15371 548 aaKnown RBP eCLIP12.47□□□□□ -0.41
C4orf3-201ENST00000399075 ECE2O60344 883 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 TBCAO75347 108 aaKnown RBP12.47□□□□□ -0.41
C4orf3-201ENST00000399075 NR3C1P04150 777 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 EPB41P11171 864 aaKnown RBP12.47□□□□□ -0.41
C4orf3-201ENST00000399075 PON1P27169 355 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 APBA1Q02410 837 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 COL23A1Q86Y22 540 aaPredicted RBP12.47□□□□□ -0.41
C4orf3-201ENST00000399075 IFT20Q8IY31 132 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 FAM212AQ96EL1 285 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 UIMC1Q96RL1 719 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 PSMB7Q99436 277 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 TUFT1Q9NNX1 390 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 ADAMTS1Q9UHI8 967 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 NENFQ9UMX5 172 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 RABGAP1Q9Y3P9 1069 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 PCDHAC2Q9Y5I4 1007 aa12.47□□□□□ -0.41
C4orf3-201ENST00000399075 GOLGA8KD6RF30 607 aa12.46□□□□□ -0.41
C4orf3-201ENST00000399075 MEIS1O00470 390 aa12.46□□□□□ -0.41
C4orf3-201ENST00000399075 SHOX2O60902 331 aaPredicted RBP12.46□□□□□ -0.41
C4orf3-201ENST00000399075 MYBP10242 640 aa12.46□□□□□ -0.41
C4orf3-201ENST00000399075 MUTP22033 750 aa12.46□□□□□ -0.41
C4orf3-201ENST00000399075 RBM5P52756 815 aaKnown RBP eCLIP12.46□□□□□ -0.41
C4orf3-201ENST00000399075 USH1GQ495M9 461 aa12.46□□□□□ -0.41
C4orf3-201ENST00000399075 EIF2AK1Q9BQI3 630 aaKnown RBP12.46□□□□□ -0.41
C4orf3-201ENST00000399075 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.46□□□□□ -0.41
C4orf3-201ENST00000399075 TSPYL1Q9H0U9 437 aa12.46□□□□□ -0.41
C4orf3-201ENST00000399075 SMARCAL1Q9NZC9 954 aa12.46□□□□□ -0.41
C4orf3-201ENST00000399075 EHD2Q9NZN4 543 aa12.46□□□□□ -0.41
C4orf3-201ENST00000399075 CEP83Q9Y592 693 aa12.46□□□□□ -0.41
C4orf3-201ENST00000399075 IGLV3-22A0A075B6J6 115 aa12.46□□□□□ -0.42
C4orf3-201ENST00000399075 OPA1O60313 960 aa12.46□□□□□ -0.42
C4orf3-201ENST00000399075 AKAP3O75969 853 aa12.46□□□□□ -0.42
C4orf3-201ENST00000399075 UBE4BO95155 1302 aa12.46□□□□□ -0.42
C4orf3-201ENST00000399075 GDF11O95390 407 aa12.46□□□□□ -0.42
C4orf3-201ENST00000399075 MATR3P43243 847 aaKnown RBP eCLIP12.46□□□□□ -0.42
C4orf3-201ENST00000399075 PTK2Q05397 1052 aa12.46□□□□□ -0.42
C4orf3-201ENST00000399075 RBM26Q5T8P6 1007 aaKnown RBP12.46□□□□□ -0.42
C4orf3-201ENST00000399075 STYK1Q6J9G0 422 aa12.46□□□□□ -0.42
C4orf3-201ENST00000399075 GBP6Q6ZN66 633 aa12.46□□□□□ -0.42
C4orf3-201ENST00000399075 GDAP1L1Q96MZ0 367 aa12.46□□□□□ -0.42
C4orf3-201ENST00000399075 SPAG5Q96R06 1193 aa12.46□□□□□ -0.42
C4orf3-201ENST00000399075 RUSC1Q9BVN2 902 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms