RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 ZBTB42B2RXF5 422 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 DKC1O60832 514 aaKnown RBP eCLIP11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 SLITRK3O94933 977 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 LYPLA2O95372 231 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 OATP04181 439 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 INSRRP14616 1297 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 QARSP47897 775 aaKnown RBP11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 PRKCEQ02156 737 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 PPFIA1Q13136 1202 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 PTK7Q13308 1070 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 PTPAQ15257 358 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 GRIK4Q16099 956 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 ZNF484Q5JVG2 852 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 MARCH8Q5T0T0 291 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 FAM173BQ6P4H8 233 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 SERINC5Q86VE9 423 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 C4orf19Q8IY42 314 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 BANK1Q8NDB2 785 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 TRIM43Q96BQ3 446 aaPredicted RBP11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 EIF2AK1Q9BQI3 630 aaKnown RBP11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 NIFKQ9BYG3 293 aaKnown RBP11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 TMEM39AQ9NV64 488 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 SETD4Q9NVD3 440 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 WRAP73Q9P2S5 460 aaPredicted RBP11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 TRPC6Q9Y210 931 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 ZDHHC9Q9Y397 364 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 CLIC4Q9Y696 253 aa11.73□□□□□ -0.53
CYCSP55-201ENST00000399027 PITPNM1O00562 1244 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 TREHO43280 583 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 TIMP1P01033 207 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 MUTP22033 750 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 ITGB8P26012 769 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 ANP32AP39687 249 aaKnown RBP11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 NASPP49321 788 aaPredicted RBP11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 ZNF200P98182 395 aaPredicted RBP11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 TARBP2Q15633 366 aaKnown RBP11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 TRIM71Q2Q1W2 868 aaKnown RBP11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 XKR3Q5GH77 459 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 DTHD1Q6ZMT9 781 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 RPAINQ86UA6 219 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 CAGE1Q8TC20 777 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 DHX38Q92620 1227 aaKnown RBP11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 DYDC2Q96IM9 177 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 USP28Q96RU2 1077 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 LXNQ9BS40 222 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 POLR3CQ9BUI4 534 aaPredicted RBP11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 NOC4LQ9BVI4 516 aaKnown RBP11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 RAB34Q9BZG1 259 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 FTOQ9C0B1 505 aaKnown RBP eCLIP11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 ZSWIM4Q9H7M6 989 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 TUFT1Q9NNX1 390 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 NRBP2Q9NSY0 501 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 RGL1Q9NZL6 768 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 PRKAG2Q9UGJ0 569 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 TUBE1Q9UJT0 475 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 STK24Q9Y6E0 443 aa11.72□□□□□ -0.53
CYCSP55-201ENST00000399027 H0YGN5 161 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 CAND2O75155 1236 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 SPATA31C1P0DKV0 1188 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 CYP2C9P11712 490 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 SYN1P17600 705 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 RPA1P27694 616 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 VASPP50552 380 aaPredicted RBP11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 HAUS3Q68CZ6 603 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 ATL3Q6DD88 541 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 MTHFD1LQ6UB35 978 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 ANO5Q75V66 913 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 CATSPER3Q86XQ3 398 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 CKAP2LQ8IYA6 745 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 CCDC155Q8N6L0 562 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 ERMNQ8TAM6 284 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 WNT8BQ93098 351 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 ZNF396Q96N95 335 aaPredicted RBP11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 CEP89Q96ST8 783 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 RNF39Q9H2S5 420 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 HIPK3Q9H422 1215 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 PRDM5Q9NQX1 630 aaPredicted RBP11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 LRWD1Q9UFC0 647 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 ZMYND8Q9ULU4 1186 aaPredicted RBP11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 NOD1Q9Y239 953 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 PPME1Q9Y570 386 aa11.71□□□□□ -0.53
CYCSP55-201ENST00000399027 UMODL1Q5DID0 1318 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 SMIM35A0A1B0GVV1 85 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 VWA3AA6NCI4 1184 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 MED24O75448 989 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 C22orf31O95567 290 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 RPLP2P05387 115 aaKnown RBP11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 XRCC6P12956 609 aaKnown RBP eCLIP11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 RAG1P15918 1043 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 YWHABP31946 246 aaKnown RBP11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 CYP4A11Q02928 519 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 BFSP2Q13515 415 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 CTTNQ14247 550 aaKnown RBP11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 SLC39A14Q15043 492 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 FOXD4L5Q5VV16 416 aaPredicted RBP11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 MFSD5Q6N075 450 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 TAF2Q6P1X5 1199 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 LINC01465Q8N7H1 131 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 LINC00301Q8NCQ3 95 aa11.7□□□□□ -0.54
CYCSP55-201ENST00000399027 TRAPPC12Q8WVT3 735 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms