RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 APBA1Q02410 837 aa15.22■□□□□ 0.03
PRAME-202ENST00000398743 GPS2Q13227 327 aa15.22■□□□□ 0.03
PRAME-202ENST00000398743 RNF10Q8N5U6 811 aaKnown RBP15.22■□□□□ 0.03
PRAME-202ENST00000398743 MSL3Q8N5Y2 521 aaKnown RBP15.22■□□□□ 0.03
PRAME-202ENST00000398743 MTMR14Q8NCE2 650 aa15.22■□□□□ 0.03
PRAME-202ENST00000398743 DRC1Q96MC2 740 aa15.22■□□□□ 0.03
PRAME-202ENST00000398743 NOX5Q96PH1 765 aa15.22■□□□□ 0.03
PRAME-202ENST00000398743 METTL14Q9HCE5 456 aaKnown RBP15.22■□□□□ 0.03
PRAME-202ENST00000398743 RNF216Q9NWF9 866 aaPredicted RBP15.22■□□□□ 0.03
PRAME-202ENST00000398743 AIPL1Q9NZN9 384 aa15.22■□□□□ 0.03
PRAME-202ENST00000398743 COL4A5P29400 1685 aa15.22■□□□□ 0.03
PRAME-202ENST00000398743 POLR3GO15318 223 aaPredicted RBP15.21■□□□□ 0.03
PRAME-202ENST00000398743 EIF3DO15371 548 aaKnown RBP eCLIP15.21■□□□□ 0.03
PRAME-202ENST00000398743 AKAP3O75969 853 aa15.21■□□□□ 0.03
PRAME-202ENST00000398743 FAM13AO94988 1023 aa15.21■□□□□ 0.03
PRAME-202ENST00000398743 EPB41P11171 864 aaKnown RBP15.21■□□□□ 0.03
PRAME-202ENST00000398743 MUTP22033 750 aa15.21■□□□□ 0.03
PRAME-202ENST00000398743 SAMD1Q6SPF0 538 aaPredicted RBP15.21■□□□□ 0.03
PRAME-202ENST00000398743 SLC30A10Q6XR72 485 aa15.21■□□□□ 0.03
PRAME-202ENST00000398743 FAM133AQ8N9E0 248 aa15.21■□□□□ 0.03
PRAME-202ENST00000398743 AGBL3Q8NEM8 1001 aa15.21■□□□□ 0.03
PRAME-202ENST00000398743 ZNF577Q9BSK1 485 aa15.21■□□□□ 0.03
PRAME-202ENST00000398743 WDR11Q9BZH6 1224 aa15.21■□□□□ 0.03
PRAME-202ENST00000398743 VPS33BQ9H267 617 aa15.21■□□□□ 0.03
PRAME-202ENST00000398743 PLCB1Q9NQ66 1216 aa15.21■□□□□ 0.03
PRAME-202ENST00000398743 PDE2AO00408 941 aaPredicted RBP15.21■□□□□ 0.02
PRAME-202ENST00000398743 EIF3JO75822 258 aaKnown RBP15.21■□□□□ 0.02
PRAME-202ENST00000398743 TCP1P17987 556 aaKnown RBP15.21■□□□□ 0.02
PRAME-202ENST00000398743 KLHL30Q0D2K2 578 aa15.21■□□□□ 0.02
PRAME-202ENST00000398743 ASIC2Q16515 512 aa15.21■□□□□ 0.02
PRAME-202ENST00000398743 SLC18A3Q16572 532 aa15.21■□□□□ 0.02
PRAME-202ENST00000398743 DCAF17Q5H9S7 520 aaPredicted RBP15.21■□□□□ 0.02
PRAME-202ENST00000398743 C1orf186Q6ZWK4 172 aa15.21■□□□□ 0.02
PRAME-202ENST00000398743 LDHDQ86WU2 507 aa15.21■□□□□ 0.02
PRAME-202ENST00000398743 CREG2Q8IUH2 290 aa15.21■□□□□ 0.02
PRAME-202ENST00000398743 ANKRD13CQ8N6S4 541 aa15.21■□□□□ 0.02
PRAME-202ENST00000398743 SUGCTQ9HAC7 445 aa15.21■□□□□ 0.02
PRAME-202ENST00000398743 POLD4Q9HCU8 107 aa15.21■□□□□ 0.02
PRAME-202ENST00000398743 SALL4Q9UJQ4 1053 aa15.21■□□□□ 0.02
PRAME-202ENST00000398743 ZNRF3Q9ULT6 936 aa15.21■□□□□ 0.02
PRAME-202ENST00000398743 HYOU1Q9Y4L1 999 aa15.21■□□□□ 0.02
PRAME-202ENST00000398743 ASNSP08243 561 aa15.2■□□□□ 0.02
PRAME-202ENST00000398743 ARID5AQ03989 594 aa15.2■□□□□ 0.02
PRAME-202ENST00000398743 EXOC3L4Q17RC7 722 aa15.2■□□□□ 0.02
PRAME-202ENST00000398743 NIM1KQ8IY84 436 aa15.2■□□□□ 0.02
PRAME-202ENST00000398743 MYCT1Q8N699 235 aa15.2■□□□□ 0.02
PRAME-202ENST00000398743 OSBPL9Q96SU4 736 aa15.2■□□□□ 0.02
PRAME-202ENST00000398743 PARVGQ9HBI0 331 aa15.2■□□□□ 0.02
PRAME-202ENST00000398743 FBXO28Q9NVF7 368 aa15.2■□□□□ 0.02
PRAME-202ENST00000398743 FRMPD4Q14CM0 1322 aa15.2■□□□□ 0.02
PRAME-202ENST00000398743 SFI1A8K8P3 1242 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 SLC9A1P19634 815 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 NAP1L1P55209 391 aaKnown RBP15.19■□□□□ 0.02
PRAME-202ENST00000398743 KCNA1Q09470 495 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 CASP8Q14790 479 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 MAP9Q49MG5 647 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 TCERG1LQ5VWI1 586 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 ZNF572Q7Z3I7 529 aaPredicted RBP15.19■□□□□ 0.02
PRAME-202ENST00000398743 SPAG5Q96R06 1193 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 NACC1Q96RE7 527 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.19■□□□□ 0.02
PRAME-202ENST00000398743 GLIS2Q9BZE0 524 aaPredicted RBP15.19■□□□□ 0.02
PRAME-202ENST00000398743 PDGFDQ9GZP0 370 aaPredicted RBP15.19■□□□□ 0.02
PRAME-202ENST00000398743 BCAS3Q9H6U6 928 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 KCND2Q9NZV8 630 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 ATAD5Q96QE3 1844 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 SHTN1A0MZ66 631 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 BUB1O43683 1085 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 ARP10275 920 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 ACTN1P12814 892 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 UCHL3P15374 230 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 DPEP1P16444 411 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 ITIH3Q06033 890 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 CCDC70Q6NSX1 233 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 COG1Q8WTW3 980 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 TEKT3Q9BXF9 490 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 DEFB129Q9H1M3 183 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 UNC45AQ9H3U1 944 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 SEL1LQ9UBV2 794 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 TSKSQ9UJT2 592 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 KIF13BQ9NQT8 1826 aa15.19■□□□□ 0.02
PRAME-202ENST00000398743 CLIC2O15247 247 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 TGFB1I1O43294 461 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 ICAM1P05362 532 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 KCNA3P22001 575 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 PON1P27169 355 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 CASP4P49662 377 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 C2orf54Q08AI8 447 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 EPHA7Q15375 998 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 KLHDC7AQ5VTJ3 777 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 NFRKBQ6P4R8 1299 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 SLC35C1Q96A29 364 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 PDE11AQ9HCR9 933 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 ADAMTS1Q9UHI8 967 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 CCPG1Q9ULG6 757 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 ZMYM2Q9UBW7 1377 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 UBE4BO95155 1302 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 A0A087X0T9 212 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 IPO5O00410 1097 aaKnown RBP15.18■□□□□ 0.02
PRAME-202ENST00000398743 WNT10BO00744 389 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms