RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 SF1Q15637 639 aaKnown RBP3.99□□□□□ -1.77
CD47-203ENST00000398258 PRSS53Q2L4Q9 553 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 TM4SF20Q53R12 229 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 FAM209AQ5JX71 171 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 SLC35F1Q5T1Q4 408 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 YOD1Q5VVQ6 348 aaPredicted RBP3.99□□□□□ -1.77
CD47-203ENST00000398258 MAMDC4Q6UXC1 1216 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 Q6ZUG5 572 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 MRGPRGQ86SM5 289 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 RIOX2Q8IUF8 465 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 GIMAP8Q8ND71 665 aaPredicted RBP3.99□□□□□ -1.77
CD47-203ENST00000398258 NINJ1Q92982 152 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 NCOA5Q9HCD5 579 aaKnown RBP3.99□□□□□ -1.77
CD47-203ENST00000398258 ZNF652Q9Y2D9 606 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 X6R8D5 127 aa3.99□□□□□ -1.77
CD47-203ENST00000398258 PPP1R12AO14974 1030 aaPredicted RBP3.98□□□□□ -1.77
CD47-203ENST00000398258 DLX3O60479 287 aa3.98□□□□□ -1.77
CD47-203ENST00000398258 ASMTLO95671 621 aa3.98□□□□□ -1.77
CD47-203ENST00000398258 CPP00450 1065 aa3.98□□□□□ -1.77
CD47-203ENST00000398258 KNG1P01042 644 aa3.98□□□□□ -1.77
CD47-203ENST00000398258 SNRPB2P08579 225 aaKnown RBP3.98□□□□□ -1.77
CD47-203ENST00000398258 KCNJ6P48051 423 aa3.98□□□□□ -1.77
CD47-203ENST00000398258 SUMO1P63165 101 aaKnown RBP3.98□□□□□ -1.77
CD47-203ENST00000398258 TAF7LQ5H9L4 462 aa3.98□□□□□ -1.77
CD47-203ENST00000398258 RNF187Q5TA31 235 aaPredicted RBP3.98□□□□□ -1.77
CD47-203ENST00000398258 NSMFQ6X4W1 530 aa3.98□□□□□ -1.77
CD47-203ENST00000398258 CCDC103Q8IW40 242 aa3.98□□□□□ -1.77
CD47-203ENST00000398258 GSTCDQ8NEC7 633 aa3.98□□□□□ -1.77
CD47-203ENST00000398258 GPATCH3Q96I76 525 aa3.98□□□□□ -1.77
CD47-203ENST00000398258 AJUBAQ96IF1 538 aa3.98□□□□□ -1.77
CD47-203ENST00000398258 YIPF4Q9BSR8 244 aa3.98□□□□□ -1.77
CD47-203ENST00000398258 SLKQ9H2G2 1235 aaPredicted RBP3.98□□□□□ -1.77
CD47-203ENST00000398258 NGRNQ9NPE2 291 aaKnown RBP3.98□□□□□ -1.77
CD47-203ENST00000398258 HECAQ9UBI9 543 aaPredicted RBP3.98□□□□□ -1.77
CD47-203ENST00000398258 TRBV23OR9-2A0A075B6M9 112 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 PRODHO43272 600 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 DNAJC6O75061 913 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 TADA3O75528 432 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 RAD17O75943 681 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 HMGB1P09429 215 aaKnown RBP3.97□□□□□ -1.77
CD47-203ENST00000398258 FBLP22087 321 aaKnown RBP3.97□□□□□ -1.77
CD47-203ENST00000398258 MASP1P48740 699 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 TUBA3CQ13748 450 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 CCDC142Q17RM4 750 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 ACBD5Q5T8D3 534 aaPredicted RBP3.97□□□□□ -1.77
CD47-203ENST00000398258 MROH9Q5TGP6 573 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 TUBA3EQ6PEY2 450 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 KRT26Q7Z3Y9 468 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 ZNF808Q8N4W9 903 aaPredicted RBP3.97□□□□□ -1.77
CD47-203ENST00000398258 TMEM145Q8NBT3 493 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 KREMEN2Q8NCW0 462 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 NPLOC4Q8TAT6 608 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 FRS2Q8WU20 508 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 KCTD13Q8WZ19 329 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 TMEM209Q96SK2 561 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 CDC6Q99741 560 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 IER2Q9BTL4 223 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 SPC25Q9HBM1 224 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 INTS7Q9NVH2 962 aaKnown RBP3.97□□□□□ -1.77
CD47-203ENST00000398258 IFT57Q9NWB7 429 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 CEP72Q9P209 647 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 CD2APQ9Y5K6 639 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 NPFFR2Q9Y5X5 522 aa3.97□□□□□ -1.77
CD47-203ENST00000398258 A0A087X0B3 334 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 MATN2O00339 956 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 ADH4P08319 380 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 HSP90B1P14625 803 aaKnown RBP3.96□□□□□ -1.78
CD47-203ENST00000398258 POU3F2P20265 443 aaPredicted RBP3.96□□□□□ -1.78
CD47-203ENST00000398258 ACRV1P26436 265 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 BCL6P41182 706 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 GABREP78334 506 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 PABPC4Q13310 644 aaKnown RBP eCLIP3.96□□□□□ -1.78
CD47-203ENST00000398258 NOLC1Q14978 699 aaKnown RBP eCLIP3.96□□□□□ -1.786e-6■□□□□ 10.9
CD47-203ENST00000398258 NTRK3Q16288 839 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 PTPROQ16827 1216 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 RNF151Q2KHN1 245 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 DENND5AQ6IQ26 1287 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 STYK1Q6J9G0 422 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 RSPO2Q6UXX9 243 aaPredicted RBP3.96□□□□□ -1.78
CD47-203ENST00000398258 CEP68Q76N32 757 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 MAMDC2Q7Z304 686 aaPredicted RBP3.96□□□□□ -1.78
CD47-203ENST00000398258 PPIL6Q8IXY8 311 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 ANKRD13AQ8IZ07 590 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 DTX3Q8N9I9 347 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 ZCRB1Q8TBF4 217 aaKnown RBP3.96□□□□□ -1.78
CD47-203ENST00000398258 ZNF483Q8TF39 744 aaPredicted RBP3.96□□□□□ -1.78
CD47-203ENST00000398258 CLIP3Q96DZ5 547 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 MFSD3Q96ES6 412 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 CLUHP3Q96NS8 147 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 IPO9Q96P70 1041 aaKnown RBP3.96□□□□□ -1.78
CD47-203ENST00000398258 TRIM39Q9HCM9 518 aa3.96□□□□□ -1.78
CD47-203ENST00000398258 MEFVO15553 781 aaPredicted RBP3.95□□□□□ -1.78
CD47-203ENST00000398258 EFCAB14O75071 495 aa3.95□□□□□ -1.78
CD47-203ENST00000398258 RAPGEF3O95398 923 aa3.95□□□□□ -1.78
CD47-203ENST00000398258 BMP5P22003 454 aa3.95□□□□□ -1.78
CD47-203ENST00000398258 NIM1KQ8IY84 436 aa3.95□□□□□ -1.78
CD47-203ENST00000398258 PTPRN2Q92932 1015 aa3.95□□□□□ -1.78
CD47-203ENST00000398258 DPYSL5Q9BPU6 564 aa3.95□□□□□ -1.78
CD47-203ENST00000398258 KATNBL1Q9H079 304 aa3.95□□□□□ -1.78
CD47-203ENST00000398258 SLC2A4RGQ9NR83 387 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms