RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.16■□□□□ 0.82
CHRFAM7A-202ENST00000397827 FAM184BQ9ULE4 1060 aa20.16■□□□□ 0.82
CHRFAM7A-202ENST00000397827 C21orf2O43822 256 aa20.16■□□□□ 0.82
CHRFAM7A-202ENST00000397827 ZYXQ15942 572 aaKnown RBP20.16■□□□□ 0.82
CHRFAM7A-202ENST00000397827 PPP4R3CPQ6ZMV5 832 aa20.16■□□□□ 0.82
CHRFAM7A-202ENST00000397827 CNKSR1Q969H4 720 aa20.16■□□□□ 0.82
CHRFAM7A-202ENST00000397827 ADAMTS1Q9UHI8 967 aa20.16■□□□□ 0.82
CHRFAM7A-202ENST00000397827 IGLV3-22A0A075B6J6 115 aa20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 ZBTB39O15060 712 aa20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 SLC9A1P19634 815 aa20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 TTC31Q49AM3 519 aaPredicted RBP20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 WDR18Q9BV38 432 aa20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 IKZF4Q9H2S9 585 aa20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 TRAF3IP3Q9Y228 551 aa20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 RABGAP1Q9Y3P9 1069 aa20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 A0A087X0T9 212 aa20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 FAM228BP0C875 321 aa20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 EPM2AIP1Q7L775 607 aaPredicted RBP20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 PACS2Q86VP3 889 aa20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 GOLGA5Q8TBA6 731 aa20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 HDAC7Q8WUI4 952 aa20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 SYN2Q92777 582 aaPredicted RBP20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 NOX5Q96PH1 765 aa20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 NUCKS1Q9H1E3 243 aaKnown RBP20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 GANQ9H2C0 597 aa20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 ARMCX3Q9UH62 379 aaPredicted RBP20.15■□□□□ 0.82
CHRFAM7A-202ENST00000397827 TARSL2A2RTX5 802 aaKnown RBP20.14■□□□□ 0.82
CHRFAM7A-202ENST00000397827 RBAK-RBAKDNI3L0D1 243 aa20.14■□□□□ 0.82
CHRFAM7A-202ENST00000397827 CLIC2O15247 247 aa20.14■□□□□ 0.82
CHRFAM7A-202ENST00000397827 AKAP3O75969 853 aa20.14■□□□□ 0.82
CHRFAM7A-202ENST00000397827 GCNT3O95395 438 aa20.14■□□□□ 0.82
CHRFAM7A-202ENST00000397827 DNA2P51530 1060 aa20.14■□□□□ 0.82
CHRFAM7A-202ENST00000397827 DCAF17Q5H9S7 520 aaPredicted RBP20.14■□□□□ 0.82
CHRFAM7A-202ENST00000397827 KLHDC7AQ5VTJ3 777 aa20.14■□□□□ 0.82
CHRFAM7A-202ENST00000397827 CDAN1Q8IWY9 1227 aa20.14■□□□□ 0.82
CHRFAM7A-202ENST00000397827 TLR10Q9BXR5 811 aa20.14■□□□□ 0.82
CHRFAM7A-202ENST00000397827 FAN1Q9Y2M0 1017 aa20.14■□□□□ 0.82
CHRFAM7A-202ENST00000397827 HYOU1Q9Y4L1 999 aa20.14■□□□□ 0.82
CHRFAM7A-202ENST00000397827 CASP4P49662 377 aa20.14■□□□□ 0.81
CHRFAM7A-202ENST00000397827 KLHL30Q0D2K2 578 aa20.14■□□□□ 0.81
CHRFAM7A-202ENST00000397827 TPH2Q8IWU9 490 aa20.14■□□□□ 0.81
CHRFAM7A-202ENST00000397827 SPATA4Q8NEY3 305 aa20.14■□□□□ 0.81
CHRFAM7A-202ENST00000397827 PACSIN1Q9BY11 444 aa20.14■□□□□ 0.81
CHRFAM7A-202ENST00000397827 RAD17O75943 681 aa20.13■□□□□ 0.81
CHRFAM7A-202ENST00000397827 ARHGAP27Q6ZUM4 889 aa20.13■□□□□ 0.81
CHRFAM7A-202ENST00000397827 LRRC1Q9BTT6 524 aa20.13■□□□□ 0.81
CHRFAM7A-202ENST00000397827 PIK3CDO00329 1044 aa20.13■□□□□ 0.81
CHRFAM7A-202ENST00000397827 TBCAO75347 108 aaKnown RBP20.13■□□□□ 0.81
CHRFAM7A-202ENST00000397827 CYP3A4P08684 503 aa20.13■□□□□ 0.81
CHRFAM7A-202ENST00000397827 KLRC1P26715 233 aa20.13■□□□□ 0.81
CHRFAM7A-202ENST00000397827 TCERG1LQ5VWI1 586 aa20.13■□□□□ 0.81
CHRFAM7A-202ENST00000397827 IQCEQ6IPM2 695 aa20.13■□□□□ 0.81
CHRFAM7A-202ENST00000397827 ARHGEF10LQ9HCE6 1279 aa20.13■□□□□ 0.81
CHRFAM7A-202ENST00000397827 ASTN1O14525 1302 aa20.13■□□□□ 0.81
CHRFAM7A-202ENST00000397827 PRLRP16471 622 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 TCP1P17987 556 aaKnown RBP20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 MCM3P25205 808 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 LMAN1P49257 510 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 SLC18A3Q16572 532 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 CCDC181Q5TID7 509 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 RINT1Q6NUQ1 792 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 MSL3Q8N5Y2 521 aaKnown RBP20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 MS4A14Q96JA4 679 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 POLR3CQ9BUI4 534 aaPredicted RBP20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 TMOD2Q9NZR1 351 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 SPDYE2BA6NHP3 402 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 EYA4O95677 639 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 SPDYE6P0CI01 402 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 SLC7A5Q01650 507 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 ASIC2Q16515 512 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 OTOP1Q7RTM1 612 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 FRMD5Q7Z6J6 570 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 DYDC2Q96IM9 177 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 DMGDHQ9UI17 866 aaKnown RBP20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 HERC5Q9UII4 1024 aaKnown RBP20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 ZBTB12Q9Y330 459 aaPredicted RBP20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 PDXKO00764 312 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 PALMO75781 387 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 AFPP02771 609 aaKnown RBP20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 XRCC5P13010 732 aaKnown RBP20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 KIAA0753Q2KHM9 967 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 MAP9Q49MG5 647 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 LRCH2Q5VUJ6 765 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 CCNI2Q6ZMN8 369 aaPredicted RBP20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 MIGA2Q7L4E1 593 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 DNAAF5Q86Y56 855 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 HSD17B14Q9BPX1 270 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 AIPL1Q9NZN9 384 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 TMX2Q9Y320 296 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 PCDHB13Q9Y5F0 798 aa20.12■□□□□ 0.81
CHRFAM7A-202ENST00000397827 CALUO43852 315 aaPredicted RBP20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 SLITRK3O94933 977 aa20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 FTCDO95954 541 aa20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 NR3C1P04150 777 aa20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 HSP90B2PQ58FF3 399 aa20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 DPY19L2P1Q6NXN4 242 aa20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 CEP83Q9Y592 693 aa20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 UCHL3P15374 230 aa20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 NMT1P30419 496 aaKnown RBP20.11■□□□□ 0.81
CHRFAM7A-202ENST00000397827 EXOC3L4Q17RC7 722 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms