RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 SETBP1Q9Y6X0 1596 aa5.87□□□□□ -1.47
VPS13C-204ENST00000395898 ZBTB5O15062 677 aa5.87□□□□□ -1.47
VPS13C-204ENST00000395898 GFPT2O94808 682 aa5.87□□□□□ -1.47
VPS13C-204ENST00000395898 FDX1P10109 184 aa5.87□□□□□ -1.47
VPS13C-204ENST00000395898 STXBP2Q15833 593 aa5.87□□□□□ -1.47
VPS13C-204ENST00000395898 EMBQ6PCB8 327 aa5.87□□□□□ -1.47
VPS13C-204ENST00000395898 RYBPQ8N488 228 aaPredicted RBP5.87□□□□□ -1.47
VPS13C-204ENST00000395898 COA7Q96BR5 231 aa5.87□□□□□ -1.47
VPS13C-204ENST00000395898 MTA3Q9BTC8 594 aa5.87□□□□□ -1.47
VPS13C-204ENST00000395898 TRIM15Q9C019 465 aa5.87□□□□□ -1.47
VPS13C-204ENST00000395898 ZMYND12Q9H0C1 365 aa5.87□□□□□ -1.47
VPS13C-204ENST00000395898 SEC31BQ9NQW1 1179 aa5.87□□□□□ -1.47
VPS13C-204ENST00000395898 SLC16A2P36021 539 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 SNX1Q13596 522 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 MAPK6Q16659 721 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 RASEFQ8IZ41 740 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 NEK9Q8TD19 979 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 RBM41Q96IZ5 413 aaKnown RBP5.86□□□□□ -1.47
VPS13C-204ENST00000395898 PCIF1Q9H4Z3 704 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 ARHGDIAP52565 204 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 SF3A3Q12874 501 aaKnown RBP eCLIP5.86□□□□□ -1.472e-8■■■■□ 21.7
VPS13C-204ENST00000395898 ART3Q13508 389 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 ERICH1Q86X53 443 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 VSTM4Q8IW00 320 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 HEXIM2Q96MH2 286 aaKnown RBP5.86□□□□□ -1.47
VPS13C-204ENST00000395898 MIF4GDA9UHW6 222 aaKnown RBP5.86□□□□□ -1.47
VPS13C-204ENST00000395898 SFNP31947 248 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 CXCR5P32302 372 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 ELF1P32519 619 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 PEX3P56589 373 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 RWDD2BP57060 319 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 BPIFA3Q9BQP9 254 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 TACO1Q9BSH4 297 aaKnown RBP5.86□□□□□ -1.47
VPS13C-204ENST00000395898 TRIM62Q9BVG3 475 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 FEM1BQ9UK73 627 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 PALLDQ8WX93 1383 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 MT-ND3P03897 115 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 MX2P20592 715 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 PHEXP78562 749 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 IFT88Q13099 833 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 ANKRD13CQ8N6S4 541 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 SLC10A4Q96EP9 437 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 PAGE5Q96GU1 130 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 VPS39Q96JC1 886 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 SUGT1Q9Y2Z0 365 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 CLTCL1P53675 1640 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 SPECC1L-ADORA2AF8WAN1 911 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 SMIM24O75264 130 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 FAM96AQ9H5X1 160 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 KIF9Q9HAQ2 790 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 CYP26B1Q9NR63 512 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 UNC13BO14795 1591 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 NRKQ7Z2Y5 1582 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 ZRANB2O95218 330 aaKnown RBP eCLIP5.86□□□□□ -1.47
VPS13C-204ENST00000395898 ADRA2BP18089 450 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 IFNA8P32881 189 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 EPHB1P54762 984 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 PPARDQ03181 441 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 PDE1CQ14123 709 aaPredicted RBP5.86□□□□□ -1.47
VPS13C-204ENST00000395898 RASIP1Q5U651 963 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 EP400NLQ6ZTU2 488 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 PODNQ7Z5L7 613 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 MAGEB5Q9BZ81 275 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 TRPV6Q9H1D0 765 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 HPCAL4Q9UM19 191 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 TRIM33Q9UPN9 1127 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 CLTCQ00610 1675 aaKnown RBP5.86□□□□□ -1.47
VPS13C-204ENST00000395898 SOWAHDA6NJG2 315 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 MEIS1O00470 390 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 ZBED1O96006 694 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 SMARCA1P28370 1054 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 SESN3P58005 492 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 RSBN1LQ6PCB5 846 aaPredicted RBP5.86□□□□□ -1.47
VPS13C-204ENST00000395898 TOGARAM2Q6ZUX3 1019 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 CRLF3Q8IUI8 442 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 TTLL11Q8NHH1 800 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 FBXO41Q8TF61 875 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 MSTO1Q9BUK6 570 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 SAMSN1Q9NSI8 373 aaKnown RBP5.86□□□□□ -1.47
VPS13C-204ENST00000395898 USP17L8P0C7I0 530 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 RCN2Q14257 317 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 KRT33BQ14525 404 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 MB21D1Q8N884 522 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 UPF3AQ9H1J1 476 aaKnown RBP5.86□□□□□ -1.47
VPS13C-204ENST00000395898 MRPL40Q9NQ50 206 aaKnown RBP5.86□□□□□ -1.47
VPS13C-204ENST00000395898 ZNF18P17022 549 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 UBXN2AP68543 259 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 LRRC41Q15345 812 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 CIAPIN1Q6FI81 312 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 APOBEC3FQ8IUX4 373 aaKnown RBP5.86□□□□□ -1.47
VPS13C-204ENST00000395898 WDR75Q8IWA0 830 aaKnown RBP5.86□□□□□ -1.47
VPS13C-204ENST00000395898 ZNF341Q9BYN7 854 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 C2orf40Q9H1Z8 148 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 CEP72Q9P209 647 aa5.86□□□□□ -1.47
VPS13C-204ENST00000395898 OVOS2A0A0G2JMS6 1433 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 OVOS2A0A0J9YW53 1432 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 OVOS2Q6IE36 1432 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 KRT37O76014 449 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 CALB1P05937 261 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 CASP2P42575 452 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms