RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 VPS16Q9H269 839 aa15.99■□□□□ 0.15
RTFDC1-203ENST00000395881 PCDHA2Q9Y5H9 948 aa15.99■□□□□ 0.15
RTFDC1-203ENST00000395881 POTEFA5A3E0 1075 aa15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 USP27XA6NNY8 438 aa15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 GYPCP04921 128 aa15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 UBXN1Q04323 297 aa15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 RBL2Q08999 1139 aa15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 PCNX4Q63HM2 1172 aa15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 CEP135Q66GS9 1140 aa15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 XRRA1Q6P2D8 792 aa15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 POTEGQ6S5H5 508 aa15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 ATG4CQ96DT6 458 aa15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 CNOT6LQ96LI5 555 aaKnown RBP15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 NUP58Q9BVL2 599 aa15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 KCND2Q9NZV8 630 aa15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 ADAMTS5Q9UNA0 930 aa15.98■□□□□ 0.15
RTFDC1-203ENST00000395881 VWA5AO00534 786 aa15.97■□□□□ 0.15
RTFDC1-203ENST00000395881 ATP2A1O14983 1001 aa15.97■□□□□ 0.15
RTFDC1-203ENST00000395881 GAS7O60861 476 aa15.97■□□□□ 0.15
RTFDC1-203ENST00000395881 COBLO75128 1261 aa15.97■□□□□ 0.15
RTFDC1-203ENST00000395881 FLT3LGP49771 235 aa15.97■□□□□ 0.15
RTFDC1-203ENST00000395881 ADKP55263 362 aaKnown RBP15.97■□□□□ 0.15
RTFDC1-203ENST00000395881 EPHA7Q15375 998 aa15.97■□□□□ 0.15
RTFDC1-203ENST00000395881 ZCWPW2Q504Y3 356 aa15.97■□□□□ 0.15
RTFDC1-203ENST00000395881 ARSHQ5FYA8 562 aa15.97■□□□□ 0.15
RTFDC1-203ENST00000395881 FIGNQ5HY92 759 aa15.97■□□□□ 0.15
RTFDC1-203ENST00000395881 ARMC5Q96C12 935 aa15.97■□□□□ 0.15
RTFDC1-203ENST00000395881 GJD2Q9UKL4 321 aa15.97■□□□□ 0.15
RTFDC1-203ENST00000395881 CTDP1Q9Y5B0 961 aaPredicted RBP15.97■□□□□ 0.15
RTFDC1-203ENST00000395881 DYNC1I1O14576 645 aa15.96■□□□□ 0.15
RTFDC1-203ENST00000395881 SSBP05455 408 aaKnown RBP eCLIP15.96■□□□□ 0.15
RTFDC1-203ENST00000395881 FKBP3Q00688 224 aaKnown RBP15.96■□□□□ 0.15
RTFDC1-203ENST00000395881 RAET1EQ8TD07 263 aa15.96■□□□□ 0.15
RTFDC1-203ENST00000395881 SYTL5Q8TDW5 730 aaPredicted RBP15.96■□□□□ 0.15
RTFDC1-203ENST00000395881 SH3TC2Q8TF17 1288 aa15.96■□□□□ 0.15
RTFDC1-203ENST00000395881 CEP63Q96MT8 703 aa15.96■□□□□ 0.15
RTFDC1-203ENST00000395881 ERGIC2Q96RQ1 377 aa15.96■□□□□ 0.15
RTFDC1-203ENST00000395881 ZNF577Q9BSK1 485 aa15.96■□□□□ 0.15
RTFDC1-203ENST00000395881 TEKT3Q9BXF9 490 aa15.96■□□□□ 0.15
RTFDC1-203ENST00000395881 UBIAD1Q9Y5Z9 338 aa15.96■□□□□ 0.15
RTFDC1-203ENST00000395881 KIAA0100Q14667 2235 aaKnown RBP15.96■□□□□ 0.15
RTFDC1-203ENST00000395881 IPO5O00410 1097 aaKnown RBP15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 EML1O00423 815 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 NFIBO00712 420 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 GNA14O95837 355 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 KRT18P05783 430 aaKnown RBP15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 ALAS1P13196 640 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 GAP43P17677 238 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 CASP14P31944 242 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 GIT2Q14161 759 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 EDRF1Q3B7T1 1238 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 TKFCQ3LXA3 575 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 SLC9C1Q4G0N8 1177 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 HERC4Q5GLZ8 1057 aaPredicted RBP15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 SAMD1Q6SPF0 538 aaPredicted RBP15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 LRRC55Q6ZSA7 311 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 TMTC1Q8IUR5 882 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 ZC3H3Q8IXZ2 948 aaKnown RBP15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 KIF18AQ8NI77 898 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 HPS3Q969F9 1004 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 RAVER2Q9HCJ3 691 aaKnown RBP15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 TRMT1Q9NXH9 659 aaKnown RBP15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 COL20A1Q9P218 1284 aa15.96■□□□□ 0.14
RTFDC1-203ENST00000395881 UQCRHLA0A096LP55 91 aa15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 SLITRK3O94933 977 aa15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 UQCRHP07919 91 aa15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 ITGB5P18084 799 aa15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 MAPK4P31152 587 aa15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 MTIF2P46199 727 aaKnown RBP15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 MARSP56192 900 aaKnown RBP15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 IRF5Q13568 498 aa15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 PTPN21Q16825 1174 aa15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 CPXCR1Q8N123 301 aa15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 REPS2Q8NFH8 660 aa15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 NACC1Q96RE7 527 aa15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 JADE2Q9NQC1 790 aa15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 OLFML3Q9NRN5 406 aa15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 CAPN11Q9UMQ6 739 aa15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 PPP2R2CQ9Y2T4 447 aa15.95■□□□□ 0.14
RTFDC1-203ENST00000395881 A0A1W2PQJ5 194 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 PRKCSHP14314 528 aaPredicted RBP15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 FXR1P51114 621 aaKnown RBP eCLIP15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 SOX10P56693 466 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 PSMC6P62333 389 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 CCNA1P78396 465 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 TMEM132BQ14DG7 1078 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 MAN2A1Q16706 1144 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 BMT2Q1RMZ1 405 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 MIIPQ5JXC2 388 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 FKBP15Q5T1M5 1219 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 GPR142Q7Z601 462 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 PLEKHH3Q7Z736 793 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 REXO1L1PQ8IX06 675 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 ZNF333Q96JL9 665 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 NOC4LQ9BVI4 516 aaKnown RBP15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 MOV10L1Q9BXT6 1211 aaKnown RBP15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 SPATC1LQ9H0A9 340 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 TBC1D22BQ9NU19 505 aa15.94■□□□□ 0.14
RTFDC1-203ENST00000395881 ABHD10Q9NUJ1 306 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms