RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 STIM1Q13586 685 aa16.81■□□□□ 0.28
SCAF11-204ENST00000395454 ACVR2BQ13705 512 aa16.81■□□□□ 0.28
SCAF11-204ENST00000395454 ECM1Q16610 540 aa16.81■□□□□ 0.28
SCAF11-204ENST00000395454 CTU1Q7Z7A3 348 aaKnown RBP16.81■□□□□ 0.28
SCAF11-204ENST00000395454 PXYLP1Q8TE99 480 aa16.81■□□□□ 0.28
SCAF11-204ENST00000395454 VTA1Q9NP79 307 aa16.81■□□□□ 0.28
SCAF11-204ENST00000395454 KCNH7Q9NS40 1196 aa16.81■□□□□ 0.28
SCAF11-204ENST00000395454 VAV3Q9UKW4 847 aa16.81■□□□□ 0.28
SCAF11-204ENST00000395454 PTPN22Q9Y2R2 807 aa16.81■□□□□ 0.28
SCAF11-204ENST00000395454 PSMA7O14818 248 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 CDK11BP21127 795 aaKnown RBP16.8■□□□□ 0.28
SCAF11-204ENST00000395454 STX17P56962 302 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 ASIC1P78348 528 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 HAUS3Q68CZ6 603 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 TTI2Q6NXR4 508 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 SLAIN1Q8ND83 568 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 TMX1Q9H3N1 280 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 PDGFCQ9NRA1 345 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 EXOC1Q9NV70 894 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 PKD2L1Q9P0L9 805 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 MSH4O15457 936 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 MARCH6O60337 910 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 IGHA2P01877 340 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 HMGCRP04035 888 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 ARP10275 920 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 SKILP12757 684 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 SFPQP23246 707 aaKnown RBP eCLIP16.8■□□□□ 0.28
SCAF11-204ENST00000395454 GRK4P32298 578 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 TERF1P54274 439 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 TRIM32Q13049 653 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 MCM6Q14566 821 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 SPECC1LQ69YQ0 1117 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 GPRASP2Q96D09 838 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 CDHR1Q96JP9 859 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 KATNBL1Q9H079 304 aa16.8■□□□□ 0.28
SCAF11-204ENST00000395454 DNAH12Q6ZR08 3092 aa16.79■□□□□ 0.28
SCAF11-204ENST00000395454 PRKAR2AP13861 404 aaKnown RBP16.79■□□□□ 0.28
SCAF11-204ENST00000395454 STK4Q13043 487 aa16.79■□□□□ 0.28
SCAF11-204ENST00000395454 NIPA1Q7RTP0 329 aa16.79■□□□□ 0.28
SCAF11-204ENST00000395454 IRF2BP1Q8IU81 584 aa16.79■□□□□ 0.28
SCAF11-204ENST00000395454 C17orf53Q8N3J3 647 aaPredicted RBP16.79■□□□□ 0.28
SCAF11-204ENST00000395454 KIAA0895Q8NCT3 520 aa16.79■□□□□ 0.28
SCAF11-204ENST00000395454 NOC3LQ8WTT2 800 aaKnown RBP16.79■□□□□ 0.28
SCAF11-204ENST00000395454 GJA10Q969M2 543 aa16.79■□□□□ 0.28
SCAF11-204ENST00000395454 ZNF577Q9BSK1 485 aa16.79■□□□□ 0.28
SCAF11-204ENST00000395454 THAP9Q9H5L6 903 aa16.79■□□□□ 0.28
SCAF11-204ENST00000395454 ITIH6Q6UXX5 1313 aa16.79■□□□□ 0.28
SCAF11-204ENST00000395454 MAFGO15525 162 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 RPA1P27694 616 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 CCT6AP40227 531 aaKnown RBP16.78■□□□□ 0.28
SCAF11-204ENST00000395454 CACNB2Q08289 660 aaPredicted RBP16.78■□□□□ 0.28
SCAF11-204ENST00000395454 TAPT1Q6NXT6 567 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 CCDC112Q8NEF3 446 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 SCFD2Q8WU76 684 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 SLC5A5Q92911 643 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 DNAJC19Q96DA6 116 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 LOXHD1Q8IVV2 1947 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 IPO5O00410 1097 aaKnown RBP16.78■□□□□ 0.28
SCAF11-204ENST00000395454 ZNF865P0CJ78 1059 aaPredicted RBP16.78■□□□□ 0.28
SCAF11-204ENST00000395454 CCNE1P24864 410 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 ADCYAP1R1P41586 468 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 PMS1P54277 932 aaKnown RBP16.78■□□□□ 0.28
SCAF11-204ENST00000395454 PSMD2Q13200 908 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 TTLL4Q14679 1199 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 LY6KQ17RY6 165 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 SLC9C1Q4G0N8 1177 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 HSP90AA4PQ58FG1 418 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 TCP11X2Q5H9J9 407 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 SH3TC2Q8TF17 1288 aa16.78■□□□□ 0.28
SCAF11-204ENST00000395454 AGO4Q9HCK5 861 aaKnown RBP16.78■□□□□ 0.28
SCAF11-204ENST00000395454 BICDL2A1A5D9 508 aa16.77■□□□□ 0.28
SCAF11-204ENST00000395454 SPATA31C2B4DYI2 1134 aa16.77■□□□□ 0.28
SCAF11-204ENST00000395454 ATP9AO75110 1047 aa16.77■□□□□ 0.28
SCAF11-204ENST00000395454 ARIH2O95376 493 aa16.77■□□□□ 0.28
SCAF11-204ENST00000395454 INHAP05111 366 aa16.77■□□□□ 0.28
SCAF11-204ENST00000395454 SPATA31C1P0DKV0 1188 aa16.77■□□□□ 0.28
SCAF11-204ENST00000395454 TXNP10599 105 aaKnown RBP16.77■□□□□ 0.28
SCAF11-204ENST00000395454 EEF1GP26641 437 aaKnown RBP16.77■□□□□ 0.28
SCAF11-204ENST00000395454 CNGA1P29973 690 aa16.77■□□□□ 0.28
SCAF11-204ENST00000395454 ICAM3P32942 547 aa16.77■□□□□ 0.28
SCAF11-204ENST00000395454 KRT31Q15323 416 aa16.77■□□□□ 0.28
SCAF11-204ENST00000395454 KCNV1Q6PIU1 500 aa16.77■□□□□ 0.28
SCAF11-204ENST00000395454 ERMNQ8TAM6 284 aa16.77■□□□□ 0.28
SCAF11-204ENST00000395454 DDX12PQ92771 950 aa16.77■□□□□ 0.28
SCAF11-204ENST00000395454 P2RX5Q93086 422 aa16.77■□□□□ 0.28
SCAF11-204ENST00000395454 POLR3CQ9BUI4 534 aaPredicted RBP16.77■□□□□ 0.28
SCAF11-204ENST00000395454 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.76■□□□□ 0.27
SCAF11-204ENST00000395454 FRMD3A2A2Y4 597 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 SORBS3O60504 671 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 MED24O75448 989 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 PSMD10O75832 226 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 TGFB3P10600 412 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 CYBAP13498 195 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 SP2Q02086 613 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 PPP2R5CQ13362 524 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 CENPPQ6IPU0 288 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 B3GNT9Q6UX72 402 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 GUF1Q8N442 669 aaKnown RBP16.76■□□□□ 0.27
SCAF11-204ENST00000395454 DUSP9Q99956 384 aaKnown RBP16.76■□□□□ 0.27
SCAF11-204ENST00000395454 DOCK5Q9H7D0 1870 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms