RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 FGFR1OPO95684 399 aaKnown RBP17.04■□□□□ 0.32
PTBP1-204ENST00000394601 POTEIP0CG38 1075 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 ALDH1B1P30837 517 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 SLFN13Q68D06 897 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 POTEGQ6S5H5 508 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 POTEEQ6S8J3 1075 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 SYN2Q92777 582 aaPredicted RBP17.04■□□□□ 0.32
PTBP1-204ENST00000394601 RPGRIP1Q96KN7 1286 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 DHX36Q9H2U1 1008 aaKnown RBP17.04■□□□□ 0.32
PTBP1-204ENST00000394601 ATRNL1Q5VV63 1379 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 POLD1P28340 1107 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 SLC1A4P43007 532 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 AARSP49588 968 aaKnown RBP eCLIP17.04■□□□□ 0.322e-6■■■■□ 23.3
PTBP1-204ENST00000394601 ITIH3Q06033 890 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 GIT2Q14161 759 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 CERKLQ49MI3 558 aaPredicted RBP17.04■□□□□ 0.32
PTBP1-204ENST00000394601 MEX3CQ5U5Q3 659 aaKnown RBP17.04■□□□□ 0.32
PTBP1-204ENST00000394601 PROCA1Q8NCQ7 364 aaPredicted RBP17.04■□□□□ 0.32
PTBP1-204ENST00000394601 TRIM58Q8NG06 486 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 GANQ9H2C0 597 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 PI4KBQ9UBF8 816 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 VAV3Q9UKW4 847 aa17.04■□□□□ 0.32
PTBP1-204ENST00000394601 PRPF6O94906 941 aaKnown RBP17.03■□□□□ 0.32
PTBP1-204ENST00000394601 IPO7O95373 1038 aaKnown RBP17.03■□□□□ 0.32
PTBP1-204ENST00000394601 ELF1P32519 619 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 ARHGAP4P98171 946 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 STRIP1Q5VSL9 837 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 KIAA0825Q8IV33 1275 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 NLGN1Q8N2Q7 840 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 MASTLQ96GX5 879 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 TLR10Q9BXR5 811 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 QTRT2Q9H974 415 aaKnown RBP17.03■□□□□ 0.32
PTBP1-204ENST00000394601 CEP72Q9P209 647 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 PITPNM2Q9BZ72 1349 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 HSPA1LP34931 641 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 FAM83BQ5T0W9 1011 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 KLHDC7AQ5VTJ3 777 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 KRT27Q7Z3Y8 459 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 MAATS1Q7Z4T9 603 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 GPBP1Q86WP2 473 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 GMCL1Q96IK5 515 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 DMGDHQ9UI17 866 aaKnown RBP17.03■□□□□ 0.32
PTBP1-204ENST00000394601 F5H6K3 240 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 HDLBPQ00341 1268 aaKnown RBP17.03■□□□□ 0.32
PTBP1-204ENST00000394601 KLRC3Q07444 240 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 AP3B2Q13367 1082 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 CCDC181Q5TID7 509 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 CCDC70Q6NSX1 233 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 MMGT1Q8N4V1 131 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 NAP1L4Q99733 375 aaKnown RBP17.03■□□□□ 0.32
PTBP1-204ENST00000394601 VIPAS39Q9H9C1 493 aa17.03■□□□□ 0.32
PTBP1-204ENST00000394601 TRAF5O00463 557 aa17.02■□□□□ 0.32
PTBP1-204ENST00000394601 UPP2O95045 317 aa17.02■□□□□ 0.32
PTBP1-204ENST00000394601 SREBF1P36956 1147 aa17.02■□□□□ 0.32
PTBP1-204ENST00000394601 ODF2Q5BJF6 829 aa17.02■□□□□ 0.32
PTBP1-204ENST00000394601 GLT8D2Q9H1C3 349 aa17.02■□□□□ 0.32
PTBP1-204ENST00000394601 A0A1W2PRG0 241 aa17.02■□□□□ 0.31
PTBP1-204ENST00000394601 CIITAP33076 1130 aa17.02■□□□□ 0.31
PTBP1-204ENST00000394601 NEDD9Q14511 834 aa17.02■□□□□ 0.31
PTBP1-204ENST00000394601 SPA17Q15506 151 aa17.02■□□□□ 0.31
PTBP1-204ENST00000394601 SWT1Q5T5J6 900 aaKnown RBP17.02■□□□□ 0.31
PTBP1-204ENST00000394601 NFRKBQ6P4R8 1299 aa17.02■□□□□ 0.31
PTBP1-204ENST00000394601 CCNI2Q6ZMN8 369 aaPredicted RBP17.02■□□□□ 0.31
PTBP1-204ENST00000394601 NELFCDQ8IXH7 590 aa17.02■□□□□ 0.31
PTBP1-204ENST00000394601 CYP2W1Q8TAV3 490 aa17.02■□□□□ 0.31
PTBP1-204ENST00000394601 ZKSCAN4Q969J2 545 aaPredicted RBP17.02■□□□□ 0.31
PTBP1-204ENST00000394601 OSBPL9Q96SU4 736 aa17.02■□□□□ 0.31
PTBP1-204ENST00000394601 TSG101Q99816 390 aa17.02■□□□□ 0.31
PTBP1-204ENST00000394601 EMILIN3Q9NT22 766 aa17.02■□□□□ 0.31
PTBP1-204ENST00000394601 AGPSO00116 658 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 RPS6KA5O75582 802 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 NDUFB10O96000 172 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 PPFIA1Q13136 1202 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 KIAA1755Q5JYT7 1200 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 BTNL9Q6UXG8 535 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 SYT2Q8N9I0 419 aaPredicted RBP17.01■□□□□ 0.31
PTBP1-204ENST00000394601 LRRC1Q9BTT6 524 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 BAIAP2L1Q9UHR4 511 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 EIF3HO15372 352 aaKnown RBP eCLIP17.01■□□□□ 0.31
PTBP1-204ENST00000394601 RPA1P27694 616 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 EDRF1Q3B7T1 1238 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 SLFN12Q8IYM2 578 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 TRAF3IP3Q9Y228 551 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 COL2A1P02458 1487 aaPredicted RBP17.01■□□□□ 0.31
PTBP1-204ENST00000394601 TBX3O15119 743 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 MSH4O15457 936 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 GDF11O95390 407 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 MMP10P09238 476 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 GSCP56915 257 aaPredicted RBP17.01■□□□□ 0.31
PTBP1-204ENST00000394601 CKAP4Q07065 602 aaKnown RBP17.01■□□□□ 0.31
PTBP1-204ENST00000394601 AENQ8WTP8 325 aaKnown RBP17.01■□□□□ 0.31
PTBP1-204ENST00000394601 C7orf43Q8WVR3 580 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 AIPL1Q9NZN9 384 aa17.01■□□□□ 0.31
PTBP1-204ENST00000394601 IGLV3-22A0A075B6J6 115 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 NCK2O43639 380 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 TMEM179Q6ZVK1 233 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 CCDC65Q8IXS2 484 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 REEP2Q9BRK0 252 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 NLRC4Q9NPP4 1024 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 SERPINA10Q9UK55 444 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms