RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 PTK7Q13308 1070 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 PTGISQ16647 500 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 XKR3Q5GH77 459 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 FAM47CQ5HY64 1035 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 ZNF484Q5JVG2 852 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 POTEBQ6S5H4 581 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 DTHD1Q6ZMT9 781 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 FERMT3Q86UX7 667 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 TRIM50Q86XT4 487 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 CCDC60Q8IWA6 550 aaPredicted RBP7.6□□□□□ -1.19
UBBP1-201ENST00000392399 EXOC8Q8IYI6 725 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 KCTD17Q8N5Z5 321 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 SPRYD3Q8NCJ5 442 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 ATP8B4Q8TF62 1192 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 BBXQ8WY36 941 aaPredicted RBP7.6□□□□□ -1.19
UBBP1-201ENST00000392399 UIMC1Q96RL1 719 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 TMEM60Q9H2L4 133 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 ZSWIM4Q9H7M6 989 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 TMEM39AQ9NV64 488 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 HDAC6Q9UBN7 1215 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 GABBR1Q9UBS5 961 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 NOD1Q9Y239 953 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 TELO2Q9Y4R8 837 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 PPME1Q9Y570 386 aa7.6□□□□□ -1.19
UBBP1-201ENST00000392399 MORC2Q9Y6X9 1032 aaPredicted RBP7.6□□□□□ -1.19
UBBP1-201ENST00000392399 COL1A2P08123 1366 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 IGSF9BQ9UPX0 1349 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 EML1O00423 815 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 KIAA0355O15063 1070 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 CHMP2AO43633 222 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 B4GALT4O60513 344 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 CAND2O75155 1236 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 LYPLA2O95372 231 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 PARNO95453 639 aaKnown RBP7.59□□□□□ -1.19
UBBP1-201ENST00000392399 BRD1O95696 1058 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 F13A1P00488 732 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 TIMP1P01033 207 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 SMIM10L2AP0DMW4 78 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 SMIM10L2BP0DMW5 78 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 XRCC6P12956 609 aaKnown RBP eCLIP7.59□□□□□ -1.19
UBBP1-201ENST00000392399 INSRRP14616 1297 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 ATP4AP20648 1035 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 TECP42680 631 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 CHMP4BP1P59074 171 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 ADAM17P78536 824 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 NUCB2P80303 420 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 PPFIA1Q13136 1202 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 BFSP2Q13515 415 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 PLCB4Q15147 1175 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 NCAPH2Q6IBW4 605 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 GDF6Q6KF10 455 aaPredicted RBP7.59□□□□□ -1.19
UBBP1-201ENST00000392399 TAF2Q6P1X5 1199 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 OTUD6AQ7L8S5 288 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 RPAINQ86UA6 219 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 C4orf19Q8IY42 314 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 CKAP2LQ8IYA6 745 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 C7orf61Q8IZ16 206 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 ZNF710Q8N1W2 664 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 CCDC155Q8N6L0 562 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 IGSF22Q8N9C0 903 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 ERMNQ8TAM6 284 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 CAGE1Q8TC20 777 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 GJA10Q969M2 543 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 AK8Q96MA6 479 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 ZNF396Q96N95 335 aaPredicted RBP7.59□□□□□ -1.19
UBBP1-201ENST00000392399 HSD17B14Q9BPX1 270 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 NIFKQ9BYG3 293 aaKnown RBP7.59□□□□□ -1.19
UBBP1-201ENST00000392399 TRPV6Q9H1D0 765 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 PDLIM7Q9NR12 457 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 SETD4Q9NVD3 440 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 LRWD1Q9UFC0 647 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 TBX21Q9UL17 535 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 ATP6V1DQ9Y5K8 247 aa7.59□□□□□ -1.19
UBBP1-201ENST00000392399 MBLAC1A4D2B0 266 aaPredicted RBP7.58□□□□□ -1.2
UBBP1-201ENST00000392399 MAGEB2O15479 319 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 SLC26A4O43511 780 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 ZNF862O60290 1169 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 SLITRK3O94933 977 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 OATP04181 439 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 RAG1P15918 1043 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 MARK3P27448 753 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 RPA1P27694 616 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 RBL2Q08999 1139 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 NBR1Q14596 966 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 SLC39A14Q15043 492 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 SF3A1Q15459 793 aaKnown RBP7.58□□□□□ -1.2
UBBP1-201ENST00000392399 GRIK4Q16099 956 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 KRT79Q5XKE5 535 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 HAUS3Q68CZ6 603 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 FAM43BQ6ZT52 329 aaPredicted RBP7.58□□□□□ -1.2
UBBP1-201ENST00000392399 RSPH3Q86UC2 560 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 SERINC5Q86VE9 423 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 NME8Q8N427 588 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 RETREG2Q8NC44 543 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 LBHD1Q9BQE6 289 aaPredicted RBP7.58□□□□□ -1.2
UBBP1-201ENST00000392399 EIF2AK1Q9BQI3 630 aaKnown RBP7.58□□□□□ -1.2
UBBP1-201ENST00000392399 JPH2Q9BR39 696 aaPredicted RBP7.58□□□□□ -1.2
UBBP1-201ENST00000392399 POLR3CQ9BUI4 534 aaPredicted RBP7.58□□□□□ -1.2
UBBP1-201ENST00000392399 TUFT1Q9NNX1 390 aa7.58□□□□□ -1.2
UBBP1-201ENST00000392399 TRMT13Q9NUP7 481 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms