RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 SMARCC2Q8TAQ2 1214 aa3.94□□□□□ -1.78
RNU6-48P-201ENST00000384161 CHAC2Q8WUX2 184 aa3.94□□□□□ -1.78
RNU6-48P-201ENST00000384161 DLG3Q92796 817 aa3.94□□□□□ -1.78
RNU6-48P-201ENST00000384161 CD244Q9BZW8 370 aa3.94□□□□□ -1.78
RNU6-48P-201ENST00000384161 MTFR1LQ9H019 292 aa3.94□□□□□ -1.78
RNU6-48P-201ENST00000384161 BCAS3Q9H6U6 928 aa3.94□□□□□ -1.78
RNU6-48P-201ENST00000384161 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.94□□□□□ -1.78
RNU6-48P-201ENST00000384161 ACSS2Q9NR19 701 aa3.94□□□□□ -1.78
RNU6-48P-201ENST00000384161 RIC8BQ9NVN3 520 aa3.94□□□□□ -1.78
RNU6-48P-201ENST00000384161 TELO2Q9Y4R8 837 aa3.94□□□□□ -1.78
RNU6-48P-201ENST00000384161 B3GALT1Q9Y5Z6 326 aa3.94□□□□□ -1.78
RNU6-48P-201ENST00000384161 FAM90A27PA6NNH2 459 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 SCDO00767 359 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 KPNA6O60684 536 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 DNAJC6O75061 913 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 LTFP02788 710 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 C4BPAP04003 597 aaKnown RBP3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 CHGBP05060 677 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 C8BP07358 591 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 VIL1P09327 827 aaKnown RBP3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 ZBTB48P10074 688 aaPredicted RBP3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 STAT5AP42229 794 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 KCNC1P48547 511 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 DBPQ10586 325 aaPredicted RBP3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 VWA3BQ502W6 1294 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 CT47A1Q5JQC4 288 aaPredicted RBP3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 VASNQ6EMK4 673 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 PKN3Q6P5Z2 889 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 TTLL7Q6ZT98 887 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 NME9Q86XW9 330 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 THNSL2Q86YJ6 484 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 RBM12BQ8IXT5 1001 aaKnown RBP3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 Q8N1X5 172 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 E2F7Q96AV8 911 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 CLIC6Q96NY7 704 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 C11orf84Q9BUA3 381 aaPredicted RBP3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 PMF1-BGLAPU3KQ54 211 aa3.93□□□□□ -1.78
RNU6-48P-201ENST00000384161 FAM83GA6ND36 823 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 PRAMEF25A6NGN4 478 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 ACOT7O00154 380 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 ZEB2O60315 1214 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 ITGB3P05106 788 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 FNTBP49356 437 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 HMGA2P52926 109 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 HTRA3P83110 453 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 PCBP1Q15365 356 aaKnown RBP eCLIP3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 CD276Q5ZPR3 534 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 DPP8Q6V1X1 898 aaPredicted RBP3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 RNF180Q86T96 592 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 FERMT3Q86UX7 667 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 ZZZ3Q8IYH5 903 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 FAM26EQ8N5C1 309 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 ZCRB1Q8TBF4 217 aaKnown RBP3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 IGDCC4Q8TDY8 1250 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 FNIP1Q8TF40 1166 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 PCIF1Q9H4Z3 704 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 DLL4Q9NR61 685 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 ARHGAP28Q9P2N2 729 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 PLA2G2DQ9UNK4 145 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 ASB1Q9Y576 335 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 SPO11Q9Y5K1 396 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 DUSP10Q9Y6W6 482 aa3.92□□□□□ -1.78
RNU6-48P-201ENST00000384161 ZNF839A8K0R7 811 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 FOXP2O15409 715 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 BRINP1O60477 761 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 KRT37O76014 449 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 NCLP19338 710 aaKnown RBP3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 AOAHP28039 575 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 ACVRL1P37023 503 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 MC3RP41968 323 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 LIMS1P48059 325 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 LSSP48449 732 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 KPNA1P52294 538 aaPredicted RBP3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 KIF11P52732 1056 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 ITGA1P56199 1179 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 DSG1Q02413 1049 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 ADCY1Q08828 1119 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 TMEM132BQ14DG7 1078 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 UBXN11Q5T124 520 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 FILIP1Q7Z7B0 1213 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 SAPCD2Q86UD0 394 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 C11orf74Q86VG3 221 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 EFHBQ8N7U6 833 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 DTX3Q8N9I9 347 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 SMC1BQ8NDV3 1235 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 WDR48Q8TAF3 677 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 LEO1Q8WVC0 666 aaPredicted RBP3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 USP7Q93009 1102 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 ZBTB8AQ96BR9 441 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 TTC1Q99614 292 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 GORASP1Q9BQQ3 440 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 NTMQ9P121 344 aa3.91□□□□□ -1.78
RNU6-48P-201ENST00000384161 SH3D21A4FU49 640 aa3.9□□□□□ -1.79
RNU6-48P-201ENST00000384161 GOLGA6L22H0YM25 854 aa3.9□□□□□ -1.79
RNU6-48P-201ENST00000384161 KCNK3O14649 394 aa3.9□□□□□ -1.79
RNU6-48P-201ENST00000384161 FBXO21O94952 628 aa3.9□□□□□ -1.79
RNU6-48P-201ENST00000384161 ATP2A2P16615 1042 aaKnown RBP3.9□□□□□ -1.79
RNU6-48P-201ENST00000384161 PTGS1P23219 599 aa3.9□□□□□ -1.79
RNU6-48P-201ENST00000384161 RPL13P26373 211 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms