RNA–Protein interactions for RNA: ENST00000378913.6

DCTN3-204, Transcript of dynactin subunit 3, humanhuman

TSL 1 (best) BASIC

Gene DCTN3, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN3-204ENST00000378913 GPNMBQ14956 572 aa11.08□□□□□ -0.64
DCTN3-204ENST00000378913 UGCGQ16739 394 aa11.08□□□□□ -0.64
DCTN3-204ENST00000378913 RASIP1Q5U651 963 aa11.08□□□□□ -0.64
DCTN3-204ENST00000378913 RUFY4Q6ZNE9 571 aa11.08□□□□□ -0.64
DCTN3-204ENST00000378913 MIER3Q7Z3K6 550 aa11.08□□□□□ -0.64
DCTN3-204ENST00000378913 DEFB128Q7Z7B8 93 aa11.08□□□□□ -0.64
DCTN3-204ENST00000378913 NOSTRINQ8IVI9 506 aa11.08□□□□□ -0.64
DCTN3-204ENST00000378913 RPUSD2Q8IZ73 545 aaKnown RBP11.08□□□□□ -0.64
DCTN3-204ENST00000378913 RDM1Q8NG50 284 aa11.08□□□□□ -0.64
DCTN3-204ENST00000378913 TRAPPC12Q8WVT3 735 aa11.08□□□□□ -0.64
DCTN3-204ENST00000378913 TNPO1Q92973 898 aaKnown RBP11.08□□□□□ -0.64
DCTN3-204ENST00000378913 GABBR1Q9UBS5 961 aa11.08□□□□□ -0.64
DCTN3-204ENST00000378913 SMC3Q9UQE7 1217 aa11.08□□□□□ -0.64
DCTN3-204ENST00000378913 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.08□□□□□ -0.64
DCTN3-204ENST00000378913 CHD7Q9P2D1 2997 aa11.08□□□□□ -0.64
DCTN3-204ENST00000378913 COL1A2P08123 1366 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 ZBTB42B2RXF5 422 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 EML1O00423 815 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 ZNF862O60290 1169 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 HBP1O60381 514 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 NEMFO60524 1076 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 NBNO60934 754 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 PARNO95453 639 aaKnown RBP11.07□□□□□ -0.64
DCTN3-204ENST00000378913 FGBP02675 491 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 U2AF2P26368 475 aaKnown RBP eCLIP11.07□□□□□ -0.64
DCTN3-204ENST00000378913 PRKCEQ02156 737 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 SPIRE1Q08AE8 756 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 GNL2Q13823 731 aaKnown RBP11.07□□□□□ -0.64
DCTN3-204ENST00000378913 TAF2Q6P1X5 1199 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 RPAINQ86UA6 219 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 SLFN12Q8IYM2 578 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 BBXQ8WY36 941 aaPredicted RBP11.07□□□□□ -0.64
DCTN3-204ENST00000378913 HERVK_113Q902F9 699 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 ZBTB10Q96DT7 871 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 LRCH3Q96II8 777 aa11.07□□□□□ -0.64
DCTN3-204ENST00000378913 RSPH10B2B2RC85 870 aa11.06□□□□□ -0.64
DCTN3-204ENST00000378913 BAG4O95429 457 aaKnown RBP11.06□□□□□ -0.64
DCTN3-204ENST00000378913 CXCL10P02778 98 aa11.06□□□□□ -0.64
DCTN3-204ENST00000378913 OATP04181 439 aa11.06□□□□□ -0.64
DCTN3-204ENST00000378913 CTSHP09668 335 aa11.06□□□□□ -0.64
DCTN3-204ENST00000378913 RSPH10BP0C881 870 aa11.06□□□□□ -0.64
DCTN3-204ENST00000378913 CALCRLQ16602 461 aa11.06□□□□□ -0.64
DCTN3-204ENST00000378913 ZNF484Q5JVG2 852 aa11.06□□□□□ -0.64
DCTN3-204ENST00000378913 FAM26DQ5JW98 314 aa11.06□□□□□ -0.64
DCTN3-204ENST00000378913 OTOP2Q7RTS6 562 aa11.06□□□□□ -0.64
DCTN3-204ENST00000378913 CKAP2LQ8IYA6 745 aa11.06□□□□□ -0.64
DCTN3-204ENST00000378913 FAM167AQ96KS9 214 aa11.06□□□□□ -0.64
DCTN3-204ENST00000378913 CXXC1Q9P0U4 656 aaPredicted RBP11.06□□□□□ -0.64
DCTN3-204ENST00000378913 RBAK-RBAKDNI3L0D1 243 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 K7ELQ4 463 aaPredicted RBP11.05□□□□□ -0.64
DCTN3-204ENST00000378913 MARCH6O60337 910 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 C22orf31O95567 290 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 ATP2B1P20020 1258 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 KLRC1P26715 233 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 MCM7P33993 719 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 TRAPPC10P48553 1259 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 TTC3P53804 2025 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 ORC2Q13416 577 aaPredicted RBP11.05□□□□□ -0.64
DCTN3-204ENST00000378913 TTC38Q5R3I4 469 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 FAM109BQ6ICB4 259 aaPredicted RBP11.05□□□□□ -0.64
DCTN3-204ENST00000378913 MTHFD1LQ6UB35 978 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 TRMT1LQ7Z2T5 733 aaKnown RBP11.05□□□□□ -0.64
DCTN3-204ENST00000378913 BANK1Q8NDB2 785 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 DNAJB3Q8WWF6 145 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 MTMR9Q96QG7 549 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 FTOQ9C0B1 505 aaKnown RBP eCLIP11.05□□□□□ -0.64
DCTN3-204ENST00000378913 FAM49AQ9H0Q0 323 aaPredicted RBP11.05□□□□□ -0.64
DCTN3-204ENST00000378913 MTIF3Q9H2K0 278 aaKnown RBP11.05□□□□□ -0.64
DCTN3-204ENST00000378913 TMEM60Q9H2L4 133 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 PCDHA2Q9Y5H9 948 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 TRANK1O15050 2925 aa11.05□□□□□ -0.64
DCTN3-204ENST00000378913 SMIM35A0A1B0GVV1 85 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 H3BQV1 296 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 STBD1O95210 358 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 CHRNA1P02708 482 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 RPLP2P05387 115 aaKnown RBP11.04□□□□□ -0.64
DCTN3-204ENST00000378913 ACTN1P12814 892 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 TOB1P50616 345 aaPredicted RBP11.04□□□□□ -0.64
DCTN3-204ENST00000378913 PSMC5P62195 406 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 SMAD3P84022 425 aaKnown RBP11.04□□□□□ -0.64
DCTN3-204ENST00000378913 MGAT3Q09327 533 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 NBR1Q14596 966 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 ZNF174Q15697 407 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 TCTN1Q2MV58 587 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 MCTP1Q6DN14 999 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 NCAPH2Q6IBW4 605 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 GPR153Q6NV75 609 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 CNKSR3Q6P9H4 555 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 RSPH3Q86UC2 560 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 SNX21Q969T3 373 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 INTS4Q96HW7 963 aaKnown RBP11.04□□□□□ -0.64
DCTN3-204ENST00000378913 OSBPL7Q9BZF2 842 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 TTC12Q9H892 705 aaPredicted RBP11.04□□□□□ -0.64
DCTN3-204ENST00000378913 NOL7Q9UMY1 257 aaKnown RBP11.04□□□□□ -0.64
DCTN3-204ENST00000378913 PCDHA12Q9UN75 941 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 CEP131Q9UPN4 1083 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 COL6A3P12111 3177 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 NLRC5Q86WI3 1866 aa11.04□□□□□ -0.64
DCTN3-204ENST00000378913 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.03□□□□□ -0.64
DCTN3-204ENST00000378913 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms