RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ZNF862O60290 1169 aa14.86□□□□□ -0.03
CKAP2-202ENST00000378034 SYN1P17600 705 aa14.86□□□□□ -0.03
CKAP2-202ENST00000378034 PRKCEQ02156 737 aa14.86□□□□□ -0.03
CKAP2-202ENST00000378034 RBL2Q08999 1139 aa14.86□□□□□ -0.03
CKAP2-202ENST00000378034 HIC1Q14526 733 aa14.86□□□□□ -0.03
CKAP2-202ENST00000378034 UGCGQ16739 394 aa14.86□□□□□ -0.03
CKAP2-202ENST00000378034 HSD17B14Q9BPX1 270 aa14.86□□□□□ -0.03
CKAP2-202ENST00000378034 LBHD1Q9BQE6 289 aaPredicted RBP14.86□□□□□ -0.03
CKAP2-202ENST00000378034 EIF2AK1Q9BQI3 630 aaKnown RBP14.86□□□□□ -0.03
CKAP2-202ENST00000378034 ZSWIM4Q9H7M6 989 aa14.86□□□□□ -0.03
CKAP2-202ENST00000378034 LTBP2Q14767 1821 aa14.86□□□□□ -0.03
CKAP2-202ENST00000378034 TREHO43280 583 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 CAND2O75155 1236 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 F13A1P00488 732 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 CYP2C9P11712 490 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 ZNF200P98182 395 aaPredicted RBP14.85□□□□□ -0.03
CKAP2-202ENST00000378034 MARCH8Q5T0T0 291 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 TAF2Q6P1X5 1199 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 C4orf19Q8IY42 314 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 IGSF22Q8N9C0 903 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 BANK1Q8NDB2 785 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 NIFKQ9BYG3 293 aaKnown RBP14.85□□□□□ -0.03
CKAP2-202ENST00000378034 TUBE1Q9UJT0 475 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 MYH15Q9Y2K3 1946 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 TRIP12Q14669 1992 aaPredicted RBP14.85□□□□□ -0.03
CKAP2-202ENST00000378034 POTEMA6NI47 508 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 SLITRK3O94933 977 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 LYPLA2O95372 231 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 ANP32AP39687 249 aaKnown RBP14.85□□□□□ -0.03
CKAP2-202ENST00000378034 SF3A1Q15459 793 aaKnown RBP14.85□□□□□ -0.03
CKAP2-202ENST00000378034 MFSD5Q6N075 450 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 RETREG2Q8NC44 543 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 DYDC2Q96IM9 177 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 ZNF396Q96N95 335 aaPredicted RBP14.85□□□□□ -0.03
CKAP2-202ENST00000378034 LXNQ9BS40 222 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 POLR3CQ9BUI4 534 aaPredicted RBP14.85□□□□□ -0.03
CKAP2-202ENST00000378034 TUFT1Q9NNX1 390 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 PPME1Q9Y570 386 aa14.85□□□□□ -0.03
CKAP2-202ENST00000378034 MORC2Q9Y6X9 1032 aaPredicted RBP14.85□□□□□ -0.03
CKAP2-202ENST00000378034 STBD1O95210 358 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 MUTP22033 750 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 PRPF38BQ5VTL8 546 aaKnown RBP14.84□□□□□ -0.03
CKAP2-202ENST00000378034 HAUS3Q68CZ6 603 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 ATL3Q6DD88 541 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 RPAINQ86UA6 219 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 TMEM199Q8N511 208 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 LRWD1Q9UFC0 647 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 PCDHA2Q9Y5H9 948 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 ZBTB42B2RXF5 422 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 MAGEB2O15479 319 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 PARNO95453 639 aaKnown RBP14.84□□□□□ -0.03
CKAP2-202ENST00000378034 BRD1O95696 1058 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 IGBP1P78318 339 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 TRIM71Q2Q1W2 868 aaKnown RBP14.84□□□□□ -0.03
CKAP2-202ENST00000378034 MTHFD1LQ6UB35 978 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 OTUD6AQ7L8S5 288 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 RSPH3Q86UC2 560 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 TPH2Q8IWU9 490 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 DHX38Q92620 1227 aaKnown RBP14.84□□□□□ -0.03
CKAP2-202ENST00000378034 PPP1R12CQ9BZL4 782 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 RGL1Q9NZL6 768 aa14.84□□□□□ -0.03
CKAP2-202ENST00000378034 DDX11L8A8MPP1 907 aa14.83□□□□□ -0.04
CKAP2-202ENST00000378034 XRCC6P12956 609 aaKnown RBP eCLIP14.83□□□□□ -0.04
CKAP2-202ENST00000378034 ITGB8P26012 769 aa14.83□□□□□ -0.04
CKAP2-202ENST00000378034 RPA1P27694 616 aa14.83□□□□□ -0.04
CKAP2-202ENST00000378034 RFC2P35250 354 aa14.83□□□□□ -0.04
CKAP2-202ENST00000378034 TARBP2Q15633 366 aaKnown RBP14.83□□□□□ -0.04
CKAP2-202ENST00000378034 FAM173BQ6P4H8 233 aa14.83□□□□□ -0.04
CKAP2-202ENST00000378034 EXOC8Q8IYI6 725 aa14.83□□□□□ -0.04
CKAP2-202ENST00000378034 BADQ92934 168 aa14.83□□□□□ -0.04
CKAP2-202ENST00000378034 AK8Q96MA6 479 aa14.83□□□□□ -0.04
CKAP2-202ENST00000378034 DAXXQ9UER7 740 aaPredicted RBP14.83□□□□□ -0.04
CKAP2-202ENST00000378034 SEPT9Q9UHD8 586 aaPredicted RBP14.83□□□□□ -0.04
CKAP2-202ENST00000378034 CLIC4Q9Y696 253 aa14.83□□□□□ -0.04
CKAP2-202ENST00000378034 SMIM35A0A1B0GVV1 85 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 CKBP12277 381 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 SELPP16109 830 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 KLRC1P26715 233 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 CYP2C18P33260 490 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 CYP4A11Q02928 519 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 PKP1Q13835 747 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 CTTNQ14247 550 aaKnown RBP14.82□□□□□ -0.04
CKAP2-202ENST00000378034 PTPAQ15257 358 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 IL17AQ16552 155 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 ANO5Q75V66 913 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 NME8Q8N427 588 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 TRAPPC12Q8WVT3 735 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 GDF15Q99988 308 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 SLC26A4O43511 780 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 C22orf31O95567 290 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 SPATA31C1P0DKV0 1188 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 YWHABP31946 246 aaKnown RBP14.82□□□□□ -0.04
CKAP2-202ENST00000378034 BMP8BP34820 402 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 MAGEA10P43363 369 aaPredicted RBP14.82□□□□□ -0.04
CKAP2-202ENST00000378034 NASPP49321 788 aaPredicted RBP14.82□□□□□ -0.04
CKAP2-202ENST00000378034 FPGSQ05932 587 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 PPIGQ13427 754 aaKnown RBP eCLIP14.82□□□□□ -0.04
CKAP2-202ENST00000378034 SLC39A14Q15043 492 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 KRT79Q5XKE5 535 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 TRMT1LQ7Z2T5 733 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms