RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 CFAP58Q5T655 872 aa13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 GBP6Q6ZN66 633 aa13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 RNPC3Q96LT9 517 aaKnown RBP13.59□□□□□ -0.23
TNFSF13B-201ENST00000375887 TULP1O00294 542 aaPredicted RBP13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 ECHS1P30084 290 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 NOP2P46087 812 aaKnown RBP13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 RPS6KA1Q15418 735 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 EXOC3L4Q17RC7 722 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 DDX42Q86XP3 938 aaKnown RBP eCLIP13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 SPAG5Q96R06 1193 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 AP1M1Q9BXS5 423 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 COA1Q9GZY4 146 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 SIX2Q9NPC8 291 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 PLCB1Q9NQ66 1216 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 SFI1A8K8P3 1242 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 CLIC2O15247 247 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 KIF4AO95239 1232 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 GUCY1A3Q02108 690 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 EPHA7Q15375 998 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 USH1GQ495M9 461 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 DCAF17Q5H9S7 520 aaPredicted RBP13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 ALKBH5Q6P6C2 394 aaKnown RBP13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 PPP4R3CPQ6ZMV5 832 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 FRMD5Q7Z6J6 570 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 MREGQ8N565 214 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 SYT2Q8N9I0 419 aaPredicted RBP13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 CRAMP1Q96RY5 1269 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 RUSC1Q9BVN2 902 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 FAM169AQ9Y6X4 670 aa13.58□□□□□ -0.24
TNFSF13B-201ENST00000375887 EBAG9O00559 213 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 AFPP02771 609 aaKnown RBP13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 RPA1P27694 616 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 SLFN13Q68D06 897 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 SLFN12Q8IYM2 578 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 DNM3Q9UQ16 869 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 MYH4Q9Y623 1939 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 MYO3BQ8WXR4 1341 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 DDTLA6NHG4 134 aaPredicted RBP13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 BTNL10A8MVZ5 291 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 CEP104O60308 925 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 ZEB2O60315 1214 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 ITGA4P13612 1032 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 TCERG1LQ5VWI1 586 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 METTL13Q8N6R0 699 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 SLC35C1Q96A29 364 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 NEUROG2Q9H2A3 272 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 BHMT2Q9H2M3 363 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 RGL1Q9NZL6 768 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 NENFQ9UMX5 172 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 ADAMTSL1Q8N6G6 1762 aa13.57□□□□□ -0.24
TNFSF13B-201ENST00000375887 ASTN1O14525 1302 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 POLRMTO00411 1230 aaKnown RBP13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 EML1O00423 815 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 PPEF1O14829 653 aaPredicted RBP13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 XRCC5P13010 732 aaKnown RBP13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 HOXA13P31271 388 aaPredicted RBP13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 SP8Q8IXZ3 490 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 TPCN2Q8NHX9 752 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 OLIG1Q8TAK6 271 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 ZC3H12CQ9C0D7 883 aaKnown RBP13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 YY1AP1Q9H869 796 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 SMCHD1A6NHR9 2005 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 KLRG2A4D1S0 409 aaPredicted RBP13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 DDX3XO00571 662 aaKnown RBP eCLIP13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 PDXKO00764 312 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 OPLAHO14841 1288 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 ZBTB39O15060 712 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 MSH4O15457 936 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 NR3C1P04150 777 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 HLA-DOAP06340 250 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 ADRA2BP18089 450 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 SH3BP5LQ7L8J4 393 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 TADA2BQ86TJ2 420 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 EFCAB13Q8IY85 973 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 OR2W6PQ8NHA6 318 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 PPM1EQ8WY54 764 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 TAF4BQ92750 862 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 MKL1Q969V6 931 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 NAP1L4Q99733 375 aaKnown RBP13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 DDX47Q9H0S4 455 aaKnown RBP13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 USP21Q9UK80 565 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 PLAAQ9Y263 795 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 BCS1LQ9Y276 419 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 SUGT1Q9Y2Z0 365 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 PCDHB13Q9Y5F0 798 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 ATAD5Q96QE3 1844 aa13.56□□□□□ -0.24
TNFSF13B-201ENST00000375887 SART1O43290 800 aaKnown RBP13.55□□□□□ -0.24
TNFSF13B-201ENST00000375887 TGFB1I1O43294 461 aa13.55□□□□□ -0.24
TNFSF13B-201ENST00000375887 FLT3P36888 993 aa13.55□□□□□ -0.24
TNFSF13B-201ENST00000375887 LIG3P49916 1009 aa13.55□□□□□ -0.24
TNFSF13B-201ENST00000375887 JAM2P57087 298 aa13.55□□□□□ -0.24
TNFSF13B-201ENST00000375887 UAP1Q16222 522 aaPredicted RBP13.55□□□□□ -0.24
TNFSF13B-201ENST00000375887 TTC31Q49AM3 519 aaPredicted RBP13.55□□□□□ -0.24
TNFSF13B-201ENST00000375887 KSR1Q8IVT5 923 aa13.55□□□□□ -0.24
TNFSF13B-201ENST00000375887 CD302Q8IX05 232 aa13.55□□□□□ -0.24
TNFSF13B-201ENST00000375887 WHAMMQ8TF30 809 aa13.55□□□□□ -0.24
TNFSF13B-201ENST00000375887 TAF1DQ9H5J8 278 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms