RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 RSPH10B2B2RC85 870 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 RSPH10BP0C881 870 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 ALAS1P13196 640 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 SFNP31947 248 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 HMGCS2P54868 508 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 PPP2R3AQ06190 1150 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 MTMR1Q13613 665 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 HERC4Q5GLZ8 1057 aaPredicted RBP13.9□□□□□ -0.18
PRPF4-202ENST00000374199 ZNF746Q6NUN9 644 aaPredicted RBP13.9□□□□□ -0.18
PRPF4-202ENST00000374199 USP50Q70EL3 339 aaPredicted RBP13.9□□□□□ -0.18
PRPF4-202ENST00000374199 ZNF720Q7Z2F6 126 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 CCDC170Q8IYT3 715 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 KIF18AQ8NI77 898 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 SYT17Q9BSW7 474 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 TEX13BQ9BXU2 312 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 PDLIM7Q9NR12 457 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 RNF146Q9NTX7 359 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 HOXC10Q9NYD6 342 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 RBAK-RBAKDNI3L0D1 243 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 CCNE2O96020 404 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 CCDC175P0C221 793 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 IDEP14735 1019 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 JAK3P52333 1124 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 ZNF710Q8N1W2 664 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 CHST13Q8NET6 341 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 MYO1AQ9UBC5 1043 aa13.9□□□□□ -0.18
PRPF4-202ENST00000374199 MYBP10242 640 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 KLK7P49862 253 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 PPATQ06203 517 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
PRPF4-202ENST00000374199 DNERQ8NFT8 737 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 IWS1Q96ST2 819 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 MKNK1Q9BUB5 465 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 EPHB6O15197 1021 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 CNMDO75829 334 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 DDNO94850 711 aaPredicted RBP13.89□□□□□ -0.19
PRPF4-202ENST00000374199 ATG7O95352 703 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 KRT9P35527 623 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 UBXN2AP68543 259 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 TBC1D8BQ0IIM8 1120 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 ZSWIM4Q9H7M6 989 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 AGPAT5Q9NUQ2 364 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 USP20Q9Y2K6 914 aa13.89□□□□□ -0.19
PRPF4-202ENST00000374199 GTPBP10A4D1E9 387 aaKnown RBP13.88□□□□□ -0.19
PRPF4-202ENST00000374199 SPATA31C2B4DYI2 1134 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 KRT76Q01546 638 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 CYP4A11Q02928 519 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 RIOX2Q8IUF8 465 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 RMDN3Q96TC7 470 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 PLCB1Q9NQ66 1216 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 ANKEF1Q9NU02 776 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 LUC7L2Q9Y383 392 aaKnown RBP13.88□□□□□ -0.19
PRPF4-202ENST00000374199 ZBTB39O15060 712 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 TPM1P09493 284 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 CCND2P30279 289 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 RARRES1P49788 294 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 PRAMEF18Q5VWM3 479 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 GANQ9H2C0 597 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 BCAS3Q9H6U6 928 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 ACAD9Q9H845 621 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 PARVGQ9HBI0 331 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 A1CFQ9NQ94 594 aaKnown RBP13.88□□□□□ -0.19
PRPF4-202ENST00000374199 FZD1Q9UP38 647 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 SPDYE5A6NIY4 337 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 EIF3CLB5ME19 914 aaKnown RBP13.88□□□□□ -0.19
PRPF4-202ENST00000374199 ATP9AO75110 1047 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 SNRPFP62306 86 aaKnown RBP13.88□□□□□ -0.19
PRPF4-202ENST00000374199 ALCAMQ13740 583 aa13.88□□□□□ -0.19
PRPF4-202ENST00000374199 BAATQ14032 418 aaPredicted RBP13.88□□□□□ -0.19
PRPF4-202ENST00000374199 EIF3CQ99613 913 aaKnown RBP13.88□□□□□ -0.19
PRPF4-202ENST00000374199 IGSF9BQ9UPX0 1349 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 IGKV6D-21A0A0A0MT36 114 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 CXCL11O14625 94 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 MAPK13O15264 365 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 NDUFA10O95299 355 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 MTIF2P46199 727 aaKnown RBP13.87□□□□□ -0.19
PRPF4-202ENST00000374199 CACNB1Q02641 598 aaPredicted RBP13.87□□□□□ -0.19
PRPF4-202ENST00000374199 HGSNATQ68CP4 663 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 SNRNP48Q6IEG0 339 aaKnown RBP13.87□□□□□ -0.19
PRPF4-202ENST00000374199 SMAP1Q8IYB5 467 aaPredicted RBP13.87□□□□□ -0.19
PRPF4-202ENST00000374199 CHP1Q99653 195 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 NENFQ9UMX5 172 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 QARSP47897 775 aaKnown RBP13.87□□□□□ -0.19
PRPF4-202ENST00000374199 NCKAP1LP55160 1127 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 HERVK_113P62684 666 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 ENPEPQ07075 957 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 DNTTIP2Q5QJE6 756 aaKnown RBP13.87□□□□□ -0.19
PRPF4-202ENST00000374199 TPH2Q8IWU9 490 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 MORC4Q8TE76 937 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 NSUN6Q8TEA1 469 aaKnown RBP13.87□□□□□ -0.19
PRPF4-202ENST00000374199 PIGOQ8TEQ8 1089 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 UIMC1Q96RL1 719 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 CGNQ9P2M7 1197 aaKnown RBP13.87□□□□□ -0.19
PRPF4-202ENST00000374199 MYO6Q9UM54 1294 aa13.87□□□□□ -0.19
PRPF4-202ENST00000374199 PMM2O15305 246 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 CALUO43852 315 aaPredicted RBP13.86□□□□□ -0.19
PRPF4-202ENST00000374199 RTP1P59025 263 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 UGCGQ16739 394 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 FKBP15Q5T1M5 1219 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 TREML2Q5T2D2 321 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms