RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 A0A1W2PRG0 241 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 RSPH10B2B2RC85 870 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 EML1O00423 815 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 AKAP3O75969 853 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 GH2P01242 217 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 RSPH10BP0C881 870 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 CAPN2P17655 700 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 PON1P27169 355 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 GGCXP38435 758 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 NFIL3Q16649 462 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 FLAD1Q8NFF5 587 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 AFAP1L1Q8TED9 768 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 CAVIN3Q969G5 261 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 GDAP1L1Q96MZ0 367 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 PACSIN1Q9BY11 444 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 METTL14Q9HCE5 456 aaKnown RBP13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 PRR12Q9ULL5 1215 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 BZW2Q9Y6E2 419 aaKnown RBP13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 SMCHD1A6NHR9 2005 aa13.78□□□□□ -0.2
TSPAN6-201ENST00000373020 ZMYM2Q9UBW7 1377 aa13.77□□□□□ -0.2
TSPAN6-201ENST00000373020 A0A0U1RQG5 324 aaPredicted RBP13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 GTPBP10A4D1E9 387 aaKnown RBP13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 TULP2O00295 520 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 CES2O00748 559 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 CLSTN1O94985 981 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 NR3C1P04150 777 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 ACTN1P12814 892 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 XRCC5P13010 732 aaKnown RBP13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 GAP43P17677 238 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 SLC9A1P19634 815 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 NNTQ13423 1086 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 EXOC3L4Q17RC7 722 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 KIAA0753Q2KHM9 967 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 C8orf74Q6P047 294 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 CYP2W1Q8TAV3 490 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 ZNF622Q969S3 477 aaKnown RBP eCLIP13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 SLC35C1Q96A29 364 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 ZBTB9Q96C00 473 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 SH3GL2Q99962 352 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 HSD17B14Q9BPX1 270 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 BHMT2Q9H2M3 363 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 TUFT1Q9NNX1 390 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 SIX2Q9NPC8 291 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 ADAMTS1Q9UHI8 967 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 RABGAP1Q9Y3P9 1069 aa13.77□□□□□ -0.21
TSPAN6-201ENST00000373020 PLSCR1O15162 318 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 EIF3DO15371 548 aaKnown RBP eCLIP13.76□□□□□ -0.211e-11■■□□□ 12.6
TSPAN6-201ENST00000373020 TBCAO75347 108 aaKnown RBP13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 HOXA13P31271 388 aaPredicted RBP13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 HSPA1LP34931 641 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 JAM2P57087 298 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 PTK2Q05397 1052 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 RBM26Q5T8P6 1007 aaKnown RBP13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 LEKR1Q6ZMV7 388 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 SND1Q7KZF4 910 aaKnown RBP eCLIP13.76□□□□□ -0.215e-7■■■■□ 21.5
TSPAN6-201ENST00000373020 ZNF571Q7Z3V5 609 aaPredicted RBP13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 RIN2Q8WYP3 895 aaPredicted RBP13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 BORCS6Q96GS4 357 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 WDR18Q9BV38 432 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 TDRD3Q9H7E2 651 aaKnown RBP13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 GDF3Q9NR23 364 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 GOLGA6BA6NDN3 693 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 FTCDO95954 541 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 RPL13P26373 211 aaKnown RBP13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 SLC7A5Q01650 507 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 CYP4A11Q02928 519 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 IKQ13123 557 aaPredicted RBP13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 PPP2R5CQ13362 524 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 RINT1Q6NUQ1 792 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 RBM46Q8TBY0 533 aaKnown RBP13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 MS4A14Q96JA4 679 aa13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 CWC15Q9P013 229 aaKnown RBP13.76□□□□□ -0.21
TSPAN6-201ENST00000373020 LOXHD1Q8IVV2 1947 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 TGFB1I1O43294 461 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 PSMD10O75832 226 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 IVLP07476 585 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 EPB41P11171 864 aaKnown RBP13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 MATR3P43243 847 aaKnown RBP eCLIP13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 NAP1L1P55209 391 aaKnown RBP13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 ARID5AQ03989 594 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 TRAF1Q13077 416 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 SLC5A5Q92911 643 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 RGL1Q9NZL6 768 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 HERC5Q9UII4 1024 aaKnown RBP13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 UBE4BO95155 1302 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 FRMPD4Q14CM0 1322 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 SHOX2O60902 331 aaPredicted RBP13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 GCNT3O95395 438 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 ZBTB48P10074 688 aaPredicted RBP13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 MUTP22033 750 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 CASP4P49662 377 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 STAT2P52630 851 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 CC2D2BQ6DHV5 1058 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 GBP6Q6ZN66 633 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 C1orf186Q6ZWK4 172 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 OTOP1Q7RTM1 612 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 LRRC57Q8N9N7 239 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 C7orf43Q8WVR3 580 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 SPAG5Q96R06 1193 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 CSRNP1Q96S65 589 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms