RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 MSL3Q8N5Y2 521 aaKnown RBP31.8■■■□□ 2.68
SSBP3-204ENST00000371320 EIF3JO75822 258 aaKnown RBP31.8■■■□□ 2.68
SSBP3-204ENST00000371320 NR3C1P04150 777 aa31.8■■■□□ 2.68
SSBP3-204ENST00000371320 ARID5AQ03989 594 aa31.8■■■□□ 2.68
SSBP3-204ENST00000371320 BCAS3Q9H6U6 928 aa31.8■■■□□ 2.68
SSBP3-204ENST00000371320 OLFML3Q9NRN5 406 aa31.8■■■□□ 2.68
SSBP3-204ENST00000371320 ASTN1O14525 1302 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 PSME4Q14997 1843 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 TBC1D12O60347 775 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 PLA2G6O60733 806 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 GAS7O60861 476 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 XRCC5P13010 732 aaKnown RBP31.79■■■□□ 2.68
SSBP3-204ENST00000371320 ASIC2Q16515 512 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 CEP55Q53EZ4 464 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 FKBP1CQ5VVH2 108 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 CDAN1Q8IWY9 1227 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 RGPD3A6NKT7 1758 aaPredicted RBP31.79■■■□□ 2.68
SSBP3-204ENST00000371320 RGPD4Q7Z3J3 1758 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 AKAP3O75969 853 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 FAM13AO94988 1023 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 EN1Q05925 392 aaPredicted RBP31.79■■■□□ 2.68
SSBP3-204ENST00000371320 KLHL30Q0D2K2 578 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 CASP8Q14790 479 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 FAM133AQ8N9E0 248 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 PDE11AQ9HCR9 933 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 HYOU1Q9Y4L1 999 aa31.79■■■□□ 2.68
SSBP3-204ENST00000371320 SFI1A8K8P3 1242 aa31.78■■■□□ 2.68
SSBP3-204ENST00000371320 TCP1P17987 556 aaKnown RBP31.78■■■□□ 2.68
SSBP3-204ENST00000371320 PRELPP51888 382 aa31.78■■■□□ 2.68
SSBP3-204ENST00000371320 COG1Q8WTW3 980 aa31.78■■■□□ 2.68
SSBP3-204ENST00000371320 OSBPL9Q96SU4 736 aa31.78■■■□□ 2.68
SSBP3-204ENST00000371320 METTL14Q9HCE5 456 aaKnown RBP31.78■■■□□ 2.68
SSBP3-204ENST00000371320 PLCB1Q9NQ66 1216 aa31.78■■■□□ 2.68
SSBP3-204ENST00000371320 FEM1BQ9UK73 627 aa31.78■■■□□ 2.68
SSBP3-204ENST00000371320 SLC16A3O15427 465 aaKnown RBP31.77■■■□□ 2.68
SSBP3-204ENST00000371320 EPB41P11171 864 aaKnown RBP31.77■■■□□ 2.68
SSBP3-204ENST00000371320 CAP2P40123 477 aa31.77■■■□□ 2.68
SSBP3-204ENST00000371320 NAP1L1P55209 391 aaKnown RBP31.77■■■□□ 2.68
SSBP3-204ENST00000371320 SLC18A3Q16572 532 aa31.77■■■□□ 2.68
SSBP3-204ENST00000371320 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP31.77■■■□□ 2.68
SSBP3-204ENST00000371320 H3BQF6 201 aa31.77■■■□□ 2.68
SSBP3-204ENST00000371320 BUB1O43683 1085 aa31.77■■■□□ 2.68
SSBP3-204ENST00000371320 ACTN1P12814 892 aa31.77■■■□□ 2.68
SSBP3-204ENST00000371320 SLC9A1P19634 815 aa31.77■■■□□ 2.68
SSBP3-204ENST00000371320 C2orf54Q08AI8 447 aa31.77■■■□□ 2.68
SSBP3-204ENST00000371320 DCAF17Q5H9S7 520 aaPredicted RBP31.77■■■□□ 2.68
SSBP3-204ENST00000371320 C1orf186Q6ZWK4 172 aa31.77■■■□□ 2.68
SSBP3-204ENST00000371320 MYCT1Q8N699 235 aa31.77■■■□□ 2.68
SSBP3-204ENST00000371320 KCNA1Q09470 495 aa31.76■■■□□ 2.68
SSBP3-204ENST00000371320 ENOX2Q16206 610 aaKnown RBP31.76■■■□□ 2.68
SSBP3-204ENST00000371320 EXOC3L4Q17RC7 722 aa31.76■■■□□ 2.68
SSBP3-204ENST00000371320 NFRKBQ6P4R8 1299 aa31.76■■■□□ 2.68
SSBP3-204ENST00000371320 LDHDQ86WU2 507 aa31.76■■■□□ 2.68
SSBP3-204ENST00000371320 CAMKK2Q96RR4 588 aa31.76■■■□□ 2.68
SSBP3-204ENST00000371320 ZNF577Q9BSK1 485 aa31.76■■■□□ 2.68
SSBP3-204ENST00000371320 FBXO28Q9NVF7 368 aa31.76■■■□□ 2.68
SSBP3-204ENST00000371320 MAP9Q49MG5 647 aa31.76■■■□□ 2.67
SSBP3-204ENST00000371320 ZNF572Q7Z3I7 529 aaPredicted RBP31.76■■■□□ 2.67
SSBP3-204ENST00000371320 ATAD5Q96QE3 1844 aa31.75■■■□□ 2.67
SSBP3-204ENST00000371320 CLIC2O15247 247 aa31.75■■■□□ 2.67
SSBP3-204ENST00000371320 EIF3DO15371 548 aaKnown RBP eCLIP31.75■■■□□ 2.67
SSBP3-204ENST00000371320 TCERG1LQ5VWI1 586 aa31.75■■■□□ 2.67
SSBP3-204ENST00000371320 CCDC70Q6NSX1 233 aa31.75■■■□□ 2.67
SSBP3-204ENST00000371320 FAM83AQ86UY5 434 aa31.75■■■□□ 2.67
SSBP3-204ENST00000371320 ZFP91Q96JP5 570 aaPredicted RBP31.75■■■□□ 2.67
SSBP3-204ENST00000371320 WDR11Q9BZH6 1224 aa31.75■■■□□ 2.67
SSBP3-204ENST00000371320 ZBTB39O15060 712 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 UCHL3P15374 230 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 POLD1P28340 1107 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 CASP4P49662 377 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 KLHDC7AQ5VTJ3 777 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 DPY19L2P1Q6NXN4 242 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 SPAG5Q96R06 1193 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 GLIS2Q9BZE0 524 aaPredicted RBP31.74■■■□□ 2.67
SSBP3-204ENST00000371320 ADAMTS1Q9UHI8 967 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 A0A087X0T9 212 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 NCK2O43639 380 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 FAM228BP0C875 321 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 ARP10275 920 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 MUTP22033 750 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 PON1P27169 355 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 SETQ01105 290 aaPredicted RBP31.74■■■□□ 2.67
SSBP3-204ENST00000371320 ITIH3Q06033 890 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 NACC1Q96RE7 527 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 PARVGQ9HBI0 331 aa31.74■■■□□ 2.67
SSBP3-204ENST00000371320 NMT1P30419 496 aaKnown RBP31.73■■■□□ 2.67
SSBP3-204ENST00000371320 NAB2Q15742 525 aa31.73■■■□□ 2.67
SSBP3-204ENST00000371320 MMGT1Q8N4V1 131 aa31.73■■■□□ 2.67
SSBP3-204ENST00000371320 MTMR14Q8NCE2 650 aa31.73■■■□□ 2.67
SSBP3-204ENST00000371320 PSMB7Q99436 277 aa31.73■■■□□ 2.67
SSBP3-204ENST00000371320 TLR10Q9BXR5 811 aa31.73■■■□□ 2.67
SSBP3-204ENST00000371320 UNC45AQ9H3U1 944 aa31.73■■■□□ 2.67
SSBP3-204ENST00000371320 COL4A5P29400 1685 aa31.73■■■□□ 2.67
SSBP3-204ENST00000371320 TGFB1I1O43294 461 aa31.72■■■□□ 2.67
SSBP3-204ENST00000371320 CXCR5P32302 372 aa31.72■■■□□ 2.67
SSBP3-204ENST00000371320 EPHA7Q15375 998 aa31.72■■■□□ 2.67
SSBP3-204ENST00000371320 CCDC181Q5TID7 509 aa31.72■■■□□ 2.67
SSBP3-204ENST00000371320 TSKSQ9UJT2 592 aa31.72■■■□□ 2.67
SSBP3-204ENST00000371320 PCDHB13Q9Y5F0 798 aa31.72■■■□□ 2.67
SSBP3-204ENST00000371320 GBP6Q6ZN66 633 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms