RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ATP8B1O43520 1251 aa23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 CACNB3P54284 484 aa23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.83■■□□□ 1.412e-8■□□□□ 9.4
TM9SF3-201ENST00000371142 OR6B3Q8NGW1 331 aa23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 INTUQ9ULD6 942 aa23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 ACSL3O95573 720 aa23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 LRRC63Q05C16 580 aa23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 ADAMTS1Q9UHI8 967 aa23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 PYROXD1Q8WU10 500 aa23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 GDAQ9Y2T3 454 aa23.83■■□□□ 1.41
TM9SF3-201ENST00000371142 RNF207Q6ZRF8 634 aa23.83■■□□□ 1.4
TM9SF3-201ENST00000371142 ARMCX2Q7L311 632 aa23.83■■□□□ 1.4
TM9SF3-201ENST00000371142 TRMT2AQ8IZ69 625 aaKnown RBP23.83■■□□□ 1.4
TM9SF3-201ENST00000371142 TRIM4Q9C037 500 aa23.83■■□□□ 1.4
TM9SF3-201ENST00000371142 ZNF394Q53GI3 561 aa23.82■■□□□ 1.4
TM9SF3-201ENST00000371142 CYP2D6P10635 497 aa23.82■■□□□ 1.4
TM9SF3-201ENST00000371142 MCAMP43121 646 aa23.82■■□□□ 1.4
TM9SF3-201ENST00000371142 ART3Q13508 389 aa23.82■■□□□ 1.4
TM9SF3-201ENST00000371142 GJB4Q9NTQ9 266 aa23.82■■□□□ 1.4
TM9SF3-201ENST00000371142 APOEP02649 317 aa23.82■■□□□ 1.4
TM9SF3-201ENST00000371142 EFCAB13Q8IY85 973 aa23.82■■□□□ 1.4
TM9SF3-201ENST00000371142 PIGBQ92521 554 aa23.82■■□□□ 1.4
TM9SF3-201ENST00000371142 LIFRP42702 1097 aa23.82■■□□□ 1.4
TM9SF3-201ENST00000371142 SURF1Q15526 300 aa23.82■■□□□ 1.4
TM9SF3-201ENST00000371142 TRIM67Q6ZTA4 783 aa23.82■■□□□ 1.4
TM9SF3-201ENST00000371142 RNF217Q8TC41 542 aa23.82■■□□□ 1.4
TM9SF3-201ENST00000371142 THNSL1Q8IYQ7 743 aa23.82■■□□□ 1.4
TM9SF3-201ENST00000371142 BANK1Q8NDB2 785 aa23.82■■□□□ 1.4
TM9SF3-201ENST00000371142 PMLP29590 882 aa23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 CNOT10Q9H9A5 744 aaKnown RBP23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 ALKBH5Q6P6C2 394 aaKnown RBP23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 FAF2Q96CS3 445 aa23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 ANLNQ9NQW6 1124 aa23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 KRT82Q9NSB4 513 aa23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 BSDC1Q9NW68 430 aaPredicted RBP23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 NFU1Q9UMS0 254 aa23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 RWDD2BP57060 319 aa23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 CDR2Q01850 454 aa23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 ATF5Q9Y2D1 282 aaPredicted RBP23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 USP17L5A8MUK1 530 aa23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 TTI1O43156 1089 aa23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 GH2P01242 217 aa23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 FGGP02679 453 aa23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 SAMD9Q5K651 1589 aa23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 MYL3P08590 195 aa23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 IREB2P48200 963 aaKnown RBP23.81■■□□□ 1.4
TM9SF3-201ENST00000371142 ARL13BQ3SXY8 428 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 CENPUQ71F23 418 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 NECTIN1Q15223 517 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 ABCB6Q9NP58 842 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 KIF21AQ7Z4S6 1674 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 KRT10P13645 584 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 NR1D1P20393 614 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 NGRNQ9NPE2 291 aaKnown RBP23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 PCDHA6Q9UN73 950 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 PCDHA8Q9Y5H6 950 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 WDR64B1ANS9 1081 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 MFAP3LO75121 409 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 YWHAHQ04917 246 aaPredicted RBP23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 ALCAMQ13740 583 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 RESP18Q5W5W9 173 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 PSPC1Q8WXF1 523 aaKnown RBP23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 CLCN6P51797 869 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 ARL6IP4Q66PJ3 421 aaKnown RBP23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 PPP4R3CPQ6ZMV5 832 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 KRT27Q7Z3Y8 459 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 TTLL11Q8NHH1 800 aa23.8■■□□□ 1.4
TM9SF3-201ENST00000371142 NEDD4P46934 1319 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 ATP7BP35670 1465 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 CASP1P29466 404 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 CIAPIN1Q6FI81 312 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 PASD1Q8IV76 773 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 CCDC138Q96M89 665 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 PPP6R3Q5H9R7 873 aaPredicted RBP23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 THOC1Q96FV9 657 aaKnown RBP23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 TXLNGQ9NUQ3 528 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 DNAJC12Q9UKB3 198 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 NLRP1Q9C000 1473 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 TRIM49BA6NDI0 452 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 ARHGEF6Q15052 776 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 SIRT2Q8IXJ6 389 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 LMCD1Q9NZU5 365 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 PRKAG2Q9UGJ0 569 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 USP6P35125 1406 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 IQANK1A0A1B0GTG1 560 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 POTEMA6NI47 508 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 NPR1P16066 1061 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 CA4P22748 312 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 ERVK-7P63135 1459 aa23.79■■□□□ 1.4
TM9SF3-201ENST00000371142 SLFN12LQ6IEE8 588 aa23.78■■□□□ 1.4
TM9SF3-201ENST00000371142 CPVLQ9H3G5 476 aa23.78■■□□□ 1.4
TM9SF3-201ENST00000371142 SH3BGRP55822 239 aaPredicted RBP23.78■■□□□ 1.4
TM9SF3-201ENST00000371142 FAM83BQ5T0W9 1011 aa23.78■■□□□ 1.4
TM9SF3-201ENST00000371142 PALMO75781 387 aa23.78■■□□□ 1.4
TM9SF3-201ENST00000371142 CASP8Q14790 479 aa23.78■■□□□ 1.4
TM9SF3-201ENST00000371142 EFHD1Q9BUP0 239 aa23.78■■□□□ 1.4
TM9SF3-201ENST00000371142 COA1Q9GZY4 146 aa23.78■■□□□ 1.4
TM9SF3-201ENST00000371142 CLASP1Q7Z460 1538 aa23.78■■□□□ 1.4
TM9SF3-201ENST00000371142 TOGARAM2Q6ZUX3 1019 aa23.78■■□□□ 1.4
TM9SF3-201ENST00000371142 SH3GLB2Q9NR46 395 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms