RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 TRIM50Q86XT4 487 aa17.22■□□□□ 0.35
SS18L1-202ENST00000370848 MICALL1Q8N3F8 863 aa17.22■□□□□ 0.35
SS18L1-202ENST00000370848 IL27Q8NEV9 243 aa17.22■□□□□ 0.35
SS18L1-202ENST00000370848 GDPD5Q8WTR4 605 aa17.22■□□□□ 0.35
SS18L1-202ENST00000370848 LMBR1Q8WVP7 490 aa17.22■□□□□ 0.35
SS18L1-202ENST00000370848 AGO4Q9HCK5 861 aaKnown RBP17.22■□□□□ 0.35
SS18L1-202ENST00000370848 TCF20Q9UGU0 1960 aaKnown RBP17.22■□□□□ 0.35
SS18L1-202ENST00000370848 NLRC5Q86WI3 1866 aa17.21■□□□□ 0.35
SS18L1-202ENST00000370848 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.21■□□□□ 0.35
SS18L1-202ENST00000370848 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.21■□□□□ 0.35
SS18L1-202ENST00000370848 MBLAC1A4D2B0 266 aaPredicted RBP17.21■□□□□ 0.35
SS18L1-202ENST00000370848 MEIS1O00470 390 aa17.21■□□□□ 0.35
SS18L1-202ENST00000370848 ITGB3BPQ13352 177 aaPredicted RBP17.21■□□□□ 0.35
SS18L1-202ENST00000370848 COL19A1Q14993 1142 aa17.21■□□□□ 0.35
SS18L1-202ENST00000370848 TAF2Q6P1X5 1199 aa17.21■□□□□ 0.35
SS18L1-202ENST00000370848 PLA2G4DQ86XP0 818 aa17.21■□□□□ 0.35
SS18L1-202ENST00000370848 TBCKQ8TEA7 893 aa17.21■□□□□ 0.35
SS18L1-202ENST00000370848 SEPT8Q92599 483 aa17.21■□□□□ 0.35
SS18L1-202ENST00000370848 ZSCAN31Q96LW9 406 aaPredicted RBP17.21■□□□□ 0.35
SS18L1-202ENST00000370848 OSBPL7Q9BZF2 842 aa17.21■□□□□ 0.35
SS18L1-202ENST00000370848 SH2B1Q9NRF2 756 aaPredicted RBP17.21■□□□□ 0.35
SS18L1-202ENST00000370848 SETD4Q9NVD3 440 aa17.21■□□□□ 0.35
SS18L1-202ENST00000370848 FAM205CA6NFA0 338 aa17.2■□□□□ 0.34
SS18L1-202ENST00000370848 RBAK-RBAKDNI3L0D1 243 aa17.2■□□□□ 0.34
SS18L1-202ENST00000370848 ST18O60284 1047 aa17.2■□□□□ 0.34
SS18L1-202ENST00000370848 MGAT3Q09327 533 aa17.2■□□□□ 0.34
SS18L1-202ENST00000370848 EARS2Q5JPH6 523 aaKnown RBP17.2■□□□□ 0.34
SS18L1-202ENST00000370848 UTP14CQ5TAP6 766 aaKnown RBP17.2■□□□□ 0.34
SS18L1-202ENST00000370848 MCTP2Q6DN12 878 aa17.2■□□□□ 0.34
SS18L1-202ENST00000370848 WASF1Q92558 559 aa17.2■□□□□ 0.34
SS18L1-202ENST00000370848 LENG9Q96B70 501 aa17.2■□□□□ 0.34
SS18L1-202ENST00000370848 RC3H2Q9HBD1 1191 aaKnown RBP17.2■□□□□ 0.34
SS18L1-202ENST00000370848 GSTTP1A0A1W2PQM5 241 aa17.19■□□□□ 0.34
SS18L1-202ENST00000370848 DDX39AO00148 427 aaKnown RBP17.19■□□□□ 0.34
SS18L1-202ENST00000370848 RPLP2P05387 115 aaKnown RBP17.19■□□□□ 0.34
SS18L1-202ENST00000370848 CIITAP33076 1130 aa17.19■□□□□ 0.34
SS18L1-202ENST00000370848 TCF7P36402 384 aaPredicted RBP17.19■□□□□ 0.34
SS18L1-202ENST00000370848 GUCY1B3Q02153 619 aa17.19■□□□□ 0.34
SS18L1-202ENST00000370848 NR5A1Q13285 461 aa17.19■□□□□ 0.34
SS18L1-202ENST00000370848 INF2Q27J81 1249 aa17.19■□□□□ 0.34
SS18L1-202ENST00000370848 PRR16Q569H4 304 aa17.19■□□□□ 0.34
SS18L1-202ENST00000370848 GALNT17Q6IS24 598 aa17.19■□□□□ 0.34
SS18L1-202ENST00000370848 NECAB3Q96P71 396 aaPredicted RBP17.19■□□□□ 0.34
SS18L1-202ENST00000370848 KAT6AQ92794 2004 aa17.19■□□□□ 0.34
SS18L1-202ENST00000370848 ATG2AQ2TAZ0 1938 aa17.18■□□□□ 0.34
SS18L1-202ENST00000370848 TDP2O95551 362 aa17.18■□□□□ 0.34
SS18L1-202ENST00000370848 LINC00271P0C7V0 271 aa17.18■□□□□ 0.34
SS18L1-202ENST00000370848 XBP1P17861 261 aa17.18■□□□□ 0.34
SS18L1-202ENST00000370848 SKIV2LQ15477 1246 aaKnown RBP17.18■□□□□ 0.34
SS18L1-202ENST00000370848 NIPA1Q7RTP0 329 aa17.18■□□□□ 0.34
SS18L1-202ENST00000370848 MYOCDQ8IZQ8 938 aa17.18■□□□□ 0.34
SS18L1-202ENST00000370848 FAM177A1Q8N128 213 aaPredicted RBP17.18■□□□□ 0.34
SS18L1-202ENST00000370848 SEPT1Q8WYJ6 367 aa17.18■□□□□ 0.34
SS18L1-202ENST00000370848 GJA10Q969M2 543 aa17.18■□□□□ 0.34
SS18L1-202ENST00000370848 MRPL38Q96DV4 380 aaKnown RBP17.18■□□□□ 0.34
SS18L1-202ENST00000370848 TMX3Q96JJ7 454 aa17.18■□□□□ 0.34
SS18L1-202ENST00000370848 LLPHQ9BRT6 129 aaKnown RBP17.18■□□□□ 0.34
SS18L1-202ENST00000370848 C17orf80Q9BSJ5 609 aa17.18■□□□□ 0.34
SS18L1-202ENST00000370848 IFIH1Q9BYX4 1025 aaKnown RBP17.18■□□□□ 0.34
SS18L1-202ENST00000370848 JPH1Q9HDC5 661 aaPredicted RBP17.18■□□□□ 0.34
SS18L1-202ENST00000370848 ERAP1Q9NZ08 941 aa17.18■□□□□ 0.34
SS18L1-202ENST00000370848 C5orf67F2Z3F1 127 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 H3BNC9 293 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 DHX15O43143 795 aaKnown RBP17.17■□□□□ 0.34
SS18L1-202ENST00000370848 CCNE2O96020 404 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 CHRNA1P02708 482 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 NONOQ15233 471 aaKnown RBP eCLIP17.17■□□□□ 0.34
SS18L1-202ENST00000370848 EPC2Q52LR7 807 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 MARCH8Q5T0T0 291 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 FAM43BQ6ZT52 329 aaPredicted RBP17.17■□□□□ 0.34
SS18L1-202ENST00000370848 PIK3AP1Q6ZUJ8 805 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 KRT25Q7Z3Z0 450 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 FBXO22Q8NEZ5 403 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 TNFRSF25Q93038 417 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 PCYT2Q99447 389 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 C1QTNF1Q9BXJ1 281 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 UBE2ZQ9H832 354 aaPredicted RBP17.17■□□□□ 0.34
SS18L1-202ENST00000370848 SLC9A2Q9UBY0 812 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 SQORQ9Y6N5 450 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 NFASCO94856 1347 aa17.17■□□□□ 0.34
SS18L1-202ENST00000370848 TTC3P53804 2025 aa17.16■□□□□ 0.34
SS18L1-202ENST00000370848 CCDC194A0A1B0GVG4 234 aa17.16■□□□□ 0.34
SS18L1-202ENST00000370848 MMP1P03956 469 aa17.16■□□□□ 0.34
SS18L1-202ENST00000370848 CTSHP09668 335 aa17.16■□□□□ 0.34
SS18L1-202ENST00000370848 COL9A1P20849 921 aa17.16■□□□□ 0.34
SS18L1-202ENST00000370848 KRT2P35908 639 aa17.16■□□□□ 0.34
SS18L1-202ENST00000370848 LEXMQ3ZCV2 418 aa17.16■□□□□ 0.34
SS18L1-202ENST00000370848 CRIPAKQ8N1N5 446 aa17.16■□□□□ 0.34
SS18L1-202ENST00000370848 SDF4Q9BRK5 362 aa17.16■□□□□ 0.34
SS18L1-202ENST00000370848 ZNF577Q9BSK1 485 aa17.16■□□□□ 0.34
SS18L1-202ENST00000370848 SMARCAD1Q9H4L7 1026 aa17.16■□□□□ 0.34
SS18L1-202ENST00000370848 BTBD18B2RXH4 712 aa17.15■□□□□ 0.34
SS18L1-202ENST00000370848 IPO5O00410 1097 aaKnown RBP17.15■□□□□ 0.34
SS18L1-202ENST00000370848 MSH4O15457 936 aa17.15■□□□□ 0.34
SS18L1-202ENST00000370848 MARK3P27448 753 aa17.15■□□□□ 0.34
SS18L1-202ENST00000370848 USP11P51784 963 aa17.15■□□□□ 0.34
SS18L1-202ENST00000370848 ACTR2P61160 394 aa17.15■□□□□ 0.34
SS18L1-202ENST00000370848 SETQ01105 290 aaPredicted RBP17.15■□□□□ 0.34
SS18L1-202ENST00000370848 PPFIA1Q13136 1202 aa17.15■□□□□ 0.34
SS18L1-202ENST00000370848 LPIN1Q14693 890 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms