RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 KBTBD12Q3ZCT8 623 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 SMUG1Q53HV7 270 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 WDR44Q5JSH3 913 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 TRIM68Q6AZZ1 485 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 SULT6B1Q6IMI4 303 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 MICALCLQ6ZW33 695 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 GBP7Q8N8V2 638 aaPredicted RBP5.58□□□□□ -1.52
UBE3D-202ENST00000369746 OR8H1Q8NGG4 311 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 OR8K1Q8NGG5 319 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.58□□□□□ -1.52
UBE3D-202ENST00000369746 RAET1EQ8TD07 263 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 EZH1Q92800 747 aaPredicted RBP5.58□□□□□ -1.52
UBE3D-202ENST00000369746 BARD1Q99728 777 aaKnown RBP5.58□□□□□ -1.52
UBE3D-202ENST00000369746 IRX2Q9BZI1 471 aaPredicted RBP5.58□□□□□ -1.52
UBE3D-202ENST00000369746 CCDC8Q9H0W5 538 aaPredicted RBP5.58□□□□□ -1.52
UBE3D-202ENST00000369746 ATP6V0A4Q9HBG4 840 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 FNIP2Q9P278 1114 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 VTI1BQ9UEU0 232 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 GIMAP2Q9UG22 337 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.58□□□□□ -1.52
UBE3D-202ENST00000369746 HERC5Q9UII4 1024 aaKnown RBP5.58□□□□□ -1.52
UBE3D-202ENST00000369746 SNCAIPQ9Y6H5 919 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 UBN2Q6ZU65 1347 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 FAM177BA6PVY3 158 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 UBE2Q2LH0YL09 131 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 APAF1O14727 1248 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 AP1G2O75843 785 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 ADCY5O95622 1261 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 IFIT1P09914 478 aaKnown RBP5.58□□□□□ -1.52
UBE3D-202ENST00000369746 PCNAP12004 261 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 TPP2P29144 1249 aaPredicted RBP5.58□□□□□ -1.52
UBE3D-202ENST00000369746 KCNJ6P48051 423 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 CSE1LP55060 971 aaKnown RBP5.58□□□□□ -1.52
UBE3D-202ENST00000369746 STK3Q13188 491 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 TRIM14Q14142 442 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 QPCTQ16769 361 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 TNNI3KQ59H18 835 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 OTOP3Q7RTS5 596 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 DEPDC4Q8N2C3 294 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 TAB3Q8N5C8 712 aaPredicted RBP5.58□□□□□ -1.52
UBE3D-202ENST00000369746 NKAIN3Q8N8D7 197 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 ANKK1Q8NFD2 765 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 FAM76AQ8TAV0 307 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 ARHGEF2Q92974 986 aaKnown RBP5.58□□□□□ -1.52
UBE3D-202ENST00000369746 CLMNQ96JQ2 1002 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 HPS4Q9NQG7 708 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 ADAM21Q9UKJ8 722 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 ARPC4-TTLL3A0A0A6YYG9 625 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 A6NNZ2 444 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 GOLGA6L19H0YKK7 550 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 ERC2O15083 957 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 USP2O75604 605 aaPredicted RBP5.57□□□□□ -1.52
UBE3D-202ENST00000369746 OSBPP22059 807 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 CLCN6P51797 869 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 ITIH3Q06033 890 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 CACNB2Q08289 660 aaPredicted RBP5.57□□□□□ -1.52
UBE3D-202ENST00000369746 MTHFSDQ2M296 383 aaKnown RBP5.57□□□□□ -1.52
UBE3D-202ENST00000369746 SUSD4Q5VX71 490 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 CEP135Q66GS9 1140 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 POMZP3Q6PJE2 187 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 LRP10Q7Z4F1 713 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 GLYCTKQ8IVS8 523 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 ENAHQ8N8S7 591 aaPredicted RBP5.57□□□□□ -1.52
UBE3D-202ENST00000369746 TBC1D5Q92609 795 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 XAGE2Q96GT9 111 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 LRCH3Q96II8 777 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 MOGAT1Q96PD6 335 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 ISCA1Q9BUE6 129 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.57□□□□□ -1.52
UBE3D-202ENST00000369746 KCTD10Q9H3F6 313 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 GMEB1Q9Y692 573 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 SQORQ9Y6N5 450 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 LRRC37A2A6NM11 1700 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 GOLGA6L9A6NEM1 432 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 NBPF26B4DH59 902 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 BIN1O00499 593 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 WNT10BO00744 389 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 RAD17O75943 681 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 ALADP13716 330 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 SLC5A1P13866 664 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 CAPN3P20807 821 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 CDC25BP30305 580 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 ATP6V1E1P36543 226 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 PDE6CP51160 858 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 PSMD7P51665 324 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 PTPN5P54829 565 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 ARHGAP4P98171 946 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 CAP1Q01518 475 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 PFKPQ01813 784 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 ROR2Q01974 943 aaKnown RBP5.57□□□□□ -1.52
UBE3D-202ENST00000369746 MAP3K10Q02779 954 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 PABPC4Q13310 644 aaKnown RBP eCLIP5.57□□□□□ -1.52
UBE3D-202ENST00000369746 MLC1Q15049 377 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 CLPPQ16740 277 aaPredicted RBP5.57□□□□□ -1.52
UBE3D-202ENST00000369746 MAJINQ3KP22 176 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 GNPTABQ3T906 1256 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 ATP13A4Q4VNC1 1196 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 RASIP1Q5U651 963 aa5.57□□□□□ -1.52
UBE3D-202ENST00000369746 SHQ1Q6PI26 577 aaKnown RBP5.57□□□□□ -1.52
UBE3D-202ENST00000369746 FAM114A1Q8IWE2 563 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms