RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 FBXL6Q8N531 539 aa13.12□□□□□ -0.31
MRPL55-212ENST00000366739 VN1R2Q8NFZ6 395 aa13.12□□□□□ -0.31
MRPL55-212ENST00000366739 NCOA7Q8NI08 942 aa13.12□□□□□ -0.31
MRPL55-212ENST00000366739 CTCFLQ8NI51 663 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-212ENST00000366739 RPGRIP1Q96KN7 1286 aa13.12□□□□□ -0.31
MRPL55-212ENST00000366739 PHF7Q9BWX1 381 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-212ENST00000366739 TMX1Q9H3N1 280 aa13.12□□□□□ -0.31
MRPL55-212ENST00000366739 TLE6Q9H808 572 aa13.12□□□□□ -0.31
MRPL55-212ENST00000366739 PSTPIP2Q9H939 334 aa13.12□□□□□ -0.31
MRPL55-212ENST00000366739 SEC63Q9UGP8 760 aaKnown RBP13.12□□□□□ -0.31
MRPL55-212ENST00000366739 TRPC6Q9Y210 931 aa13.12□□□□□ -0.31
MRPL55-212ENST00000366739 USP34Q70CQ2 3546 aa13.12□□□□□ -0.31
MRPL55-212ENST00000366739 M0QZ92 97 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 RPLP2P05387 115 aaKnown RBP13.11□□□□□ -0.31
MRPL55-212ENST00000366739 KIF5BP33176 963 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 VCPP55072 806 aaKnown RBP13.11□□□□□ -0.31
MRPL55-212ENST00000366739 AAMPQ13685 434 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 PLCB4Q15147 1175 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 PKN1Q16512 942 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 MB21D2Q8IYB1 491 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-212ENST00000366739 CMTR1Q8N1G2 835 aaKnown RBP13.11□□□□□ -0.31
MRPL55-212ENST00000366739 SRBD1Q8N5C6 995 aaKnown RBP13.11□□□□□ -0.31
MRPL55-212ENST00000366739 MICAL1Q8TDZ2 1067 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 MAP3K14Q99558 947 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 PRRX2Q99811 253 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 CELF4Q9BZC1 486 aaKnown RBP13.11□□□□□ -0.31
MRPL55-212ENST00000366739 LY9Q9HBG7 655 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 JPH1Q9HDC5 661 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-212ENST00000366739 JADE2Q9NQC1 790 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 FAM86C1Q9NVL1 165 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 HCSTQ9UBK5 93 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 LRFN2Q9ULH4 789 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 PCDHA2Q9Y5H9 948 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 ZDBF2Q9HCK1 2354 aa13.11□□□□□ -0.31
MRPL55-212ENST00000366739 hCG_1642624A0A1W2PR95 340 aa13.1□□□□□ -0.31
MRPL55-212ENST00000366739 MGEA5O60502 916 aa13.1□□□□□ -0.31
MRPL55-212ENST00000366739 DDAH1O94760 285 aa13.1□□□□□ -0.31
MRPL55-212ENST00000366739 SARSP49591 514 aaKnown RBP13.1□□□□□ -0.31
MRPL55-212ENST00000366739 SIGLEC14Q08ET2 396 aa13.1□□□□□ -0.31
MRPL55-212ENST00000366739 SPOUT1Q5T280 376 aaKnown RBP13.1□□□□□ -0.31
MRPL55-212ENST00000366739 ATP8B4Q8TF62 1192 aa13.1□□□□□ -0.31
MRPL55-212ENST00000366739 SUSD6Q92537 303 aa13.1□□□□□ -0.31
MRPL55-212ENST00000366739 ASIC4Q96FT7 647 aa13.1□□□□□ -0.31
MRPL55-212ENST00000366739 LZTS2Q9BRK4 669 aa13.1□□□□□ -0.31
MRPL55-212ENST00000366739 AZI2Q9H6S1 392 aa13.1□□□□□ -0.31
MRPL55-212ENST00000366739 TLR9Q9NR96 1032 aa13.1□□□□□ -0.31
MRPL55-212ENST00000366739 SLC9A2Q9UBY0 812 aa13.1□□□□□ -0.31
MRPL55-212ENST00000366739 SPDYE3A6NKU9 549 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 ST18O60284 1047 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 FGF18O76093 207 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 RXRAP19793 462 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 SMARCA1P28370 1054 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 ERVFC1P60507 584 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 KRT76Q01546 638 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 UBE3AQ05086 875 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 NFX1Q12986 1120 aaKnown RBP13.09□□□□□ -0.31
MRPL55-212ENST00000366739 DUSP6Q16828 381 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 TTC22Q5TAA0 569 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 KMT2EQ8IZD2 1858 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 CYP2W1Q8TAV3 490 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 PLXNA4Q9HCM2 1894 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 ERVK-5Q9HDB9 667 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 KCNH7Q9NS40 1196 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 PCDHA6Q9UN73 950 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 GINS2Q9Y248 185 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 NOC2LQ9Y3T9 749 aaKnown RBP13.09□□□□□ -0.31
MRPL55-212ENST00000366739 PCDHB7Q9Y5E2 793 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 PCDHB12Q9Y5F1 795 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 PCDHA8Q9Y5H6 950 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 KDM3AQ9Y4C1 1321 aa13.09□□□□□ -0.31
MRPL55-212ENST00000366739 SMIM35A0A1B0GVV1 85 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 TBKBP1A7MCY6 615 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 MAFGO15525 162 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 GFRA3O60609 400 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 ATF7P17544 494 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-212ENST00000366739 CHMLP26374 656 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 PDE4AP27815 886 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 GNAQP50148 359 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 ACTR2P61160 394 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 FAM102BQ5T8I3 360 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 MTHFD1LQ6UB35 978 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 PLPPR4Q7Z2D5 763 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 RAB11FIP4Q86YS3 637 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 RUFY2Q8WXA3 655 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 NEK1Q96PY6 1258 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 ADAM2Q99965 735 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 CDHR5Q9HBB8 845 aa13.08□□□□□ -0.32
MRPL55-212ENST00000366739 DENND3A2RUS2 1198 aa13.07□□□□□ -0.32
MRPL55-212ENST00000366739 FSCN2O14926 492 aa13.07□□□□□ -0.32
MRPL55-212ENST00000366739 PRC1O43663 620 aa13.07□□□□□ -0.32
MRPL55-212ENST00000366739 PDGFBP01127 241 aaPredicted RBP13.07□□□□□ -0.32
MRPL55-212ENST00000366739 ARP10275 920 aa13.07□□□□□ -0.32
MRPL55-212ENST00000366739 SP100P23497 879 aaPredicted RBP13.07□□□□□ -0.32
MRPL55-212ENST00000366739 AVPR2P30518 371 aa13.07□□□□□ -0.32
MRPL55-212ENST00000366739 STAT5BP51692 787 aa13.07□□□□□ -0.32
MRPL55-212ENST00000366739 APOBRQ0VD83 1088 aa13.07□□□□□ -0.32
MRPL55-212ENST00000366739 ITGB3BPQ13352 177 aaPredicted RBP13.07□□□□□ -0.32
MRPL55-212ENST00000366739 COL9A3Q14050 684 aaPredicted RBP13.07□□□□□ -0.32
MRPL55-212ENST00000366739 PTPN21Q16825 1174 aa13.07□□□□□ -0.32
MRPL55-212ENST00000366739 NFXL1Q6ZNB6 911 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms