RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.04□□□□□ -0.488e-7■□□□□ 9.9
SNX6-201ENST00000362031 UPF3AQ9H1J1 476 aaKnown RBP12.04□□□□□ -0.48
SNX6-201ENST00000362031 TUFT1Q9NNX1 390 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 PAK6Q9NQU5 681 aaPredicted RBP12.04□□□□□ -0.48
SNX6-201ENST00000362031 MYH9P35579 1960 aaKnown RBP12.04□□□□□ -0.48
SNX6-201ENST00000362031 PPFIA4O75335 1185 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 CCL5P13501 91 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 STAT6P42226 847 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 MDM2Q00987 491 aaPredicted RBP12.04□□□□□ -0.48
SNX6-201ENST00000362031 PRKCEQ02156 737 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 GNASQ5JWF2 1037 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 KRBA2Q6ZNG9 492 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 KLHDC9Q8NEP7 349 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 AFAP1L1Q8TED9 768 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 CALML4Q96GE6 196 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 ZNF333Q96JL9 665 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 PKNOX2Q96KN3 472 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 ZSWIM4Q9H7M6 989 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 TCEAL9Q9UHQ7 104 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 Q9Y3F1 56 aa12.04□□□□□ -0.48
SNX6-201ENST00000362031 NPHP3-ACAD11A0A0J9YXS1 232 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 ZBTB42B2RXF5 422 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 SLFN14P0C7P3 912 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 YWHABP31946 246 aaKnown RBP12.03□□□□□ -0.48
SNX6-201ENST00000362031 AFMP43652 599 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 SLC12A3P55017 1021 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 HIC1Q14526 733 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 PLCB4Q15147 1175 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 ARSHQ5FYA8 562 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 C4orf19Q8IY42 314 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 RAD54LQ92698 747 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 GLG1Q92896 1179 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 PAGE5Q96GU1 130 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 DEFB118Q96PH6 123 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 CEP89Q96ST8 783 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 AP5M1Q9H0R1 490 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 RNF208Q9H0X6 261 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 BHMT2Q9H2M3 363 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 BMP2KQ9NSY1 1161 aaPredicted RBP12.03□□□□□ -0.48
SNX6-201ENST00000362031 EMSYQ7Z589 1322 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 LYPLA2O95372 231 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 PLA2G4BP0C869 781 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 TXLNAP40222 546 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 NKX3-2P78367 333 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 PURAQ00577 322 aaKnown RBP12.03□□□□□ -0.48
SNX6-201ENST00000362031 LRRC41Q15345 812 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 KCNA10Q16322 511 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 DGKDQ16760 1214 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 KLHL40Q2TBA0 621 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 CAVIN1Q6NZI2 390 aaKnown RBP12.03□□□□□ -0.48
SNX6-201ENST00000362031 CXCL17Q6UXB2 119 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 SH3RF1Q7Z6J0 888 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 IQUBQ8NA54 791 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 TRAPPC12Q8WVT3 735 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 CDK5RAP3Q96JB5 506 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 RUSC1Q9BVN2 902 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 BLZF1Q9H2G9 400 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 KBTBD4Q9NVX7 518 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 CCDC39Q9UFE4 941 aa12.03□□□□□ -0.48
SNX6-201ENST00000362031 FRMPD3Q5JV73 1810 aa12.02□□□□□ -0.48
SNX6-201ENST00000362031 KDM3AQ9Y4C1 1321 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 MYMKA6NI61 221 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 MYL3P08590 195 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 RARRES1P49788 294 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 SOX10P56693 466 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 CHMP4BP1P59074 171 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 CACNB1Q02641 598 aaPredicted RBP12.02□□□□□ -0.49
SNX6-201ENST00000362031 RAD51AP2Q09MP3 1159 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 PNOCQ13519 176 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 PLPPR4Q7Z2D5 763 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 CNNM3Q8NE01 707 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 LARP4BQ92615 738 aaKnown RBP12.02□□□□□ -0.49
SNX6-201ENST00000362031 ATP6V0A1Q93050 837 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 ARMC5Q96C12 935 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 MCOLN1Q9GZU1 580 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 AZI2Q9H6S1 392 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 PRDM10Q9NQV6 1147 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 DNM3Q9UQ16 869 aa12.02□□□□□ -0.49
SNX6-201ENST00000362031 GRIN2DO15399 1336 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 H3BRB1 525 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 EYA4O95677 639 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 F2P00734 622 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 OATP04181 439 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 SSBP05455 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNX6-201ENST00000362031 ASGR1P07306 291 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 CPT1AP50416 773 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 CUL4BQ13620 913 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 CKAP2LQ8IYA6 745 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 NEK9Q8TD19 979 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 NACC1Q96RE7 527 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 NT5C3AQ9H0P0 336 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 CLSTN2Q9H4D0 955 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 SMARCAD1Q9H4L7 1026 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 TUT1Q9H6E5 874 aaKnown RBP12.01□□□□□ -0.49
SNX6-201ENST00000362031 KINO60870 393 aaKnown RBP12.01□□□□□ -0.49
SNX6-201ENST00000362031 MBD3O95983 291 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 MNX1P50219 401 aaPredicted RBP12.01□□□□□ -0.49
SNX6-201ENST00000362031 TARBP2Q15633 366 aaKnown RBP12.01□□□□□ -0.49
SNX6-201ENST00000362031 RINT1Q6NUQ1 792 aa12.01□□□□□ -0.49
SNX6-201ENST00000362031 ATP8B4Q8TF62 1192 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms