RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 SH3TC2Q8TF17 1288 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 SPATA33Q96N06 139 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 TRPV6Q9H1D0 765 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 LSM7Q9UK45 103 aaKnown RBP11.78□□□□□ -0.52
CLIP1-203ENST00000361654 MAGI2Q86UL8 1455 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 TAC1P20366 129 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 ARL4DP49703 201 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 BASP1P80723 227 aaKnown RBP11.78□□□□□ -0.52
CLIP1-203ENST00000361654 SNAPC2Q13487 334 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 ADAT2Q7Z6V5 191 aaKnown RBP11.78□□□□□ -0.52
CLIP1-203ENST00000361654 SH3KBP1Q96B97 665 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 CD209Q9NNX6 404 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 EPS15L1Q9UBC2 864 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 FAM95CA0A1B0GW59 222 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 LRRN2O75325 713 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 SNX19Q92543 992 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 ZNF560Q96MR9 790 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 NGRNQ9NPE2 291 aaKnown RBP11.78□□□□□ -0.52
CLIP1-203ENST00000361654 POC1B-GALNT4F8VUJ3 575 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 DDX5P17844 614 aaKnown RBP11.78□□□□□ -0.52
CLIP1-203ENST00000361654 UBE2SQ16763 222 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 C10orf76Q5T2E6 689 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 BTBD8Q5XKL5 378 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 TBC1D19Q8N5T2 526 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 SCG3Q8WXD2 468 aaKnown RBP11.78□□□□□ -0.52
CLIP1-203ENST00000361654 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 RASSF4Q9H2L5 321 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 GCNT4Q9P109 453 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 HERC5Q9UII4 1024 aaKnown RBP11.78□□□□□ -0.52
CLIP1-203ENST00000361654 DOLKQ9UPQ8 538 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 ZBTB5O15062 677 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 SYNDIG1Q9H7V2 258 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 SH3GLB2Q9NR46 395 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 ZNRF3Q9ULT6 936 aa11.78□□□□□ -0.52
CLIP1-203ENST00000361654 A0A1W2PQ27 194 aa11.77□□□□□ -0.52
CLIP1-203ENST00000361654 A0A1W2PQ64 194 aa11.77□□□□□ -0.52
CLIP1-203ENST00000361654 A0A1W2PQD8 194 aa11.77□□□□□ -0.52
CLIP1-203ENST00000361654 IKBKBO14920 756 aa11.77□□□□□ -0.52
CLIP1-203ENST00000361654 PRELPP51888 382 aa11.77□□□□□ -0.52
CLIP1-203ENST00000361654 CTTNQ14247 550 aaKnown RBP11.77□□□□□ -0.52
CLIP1-203ENST00000361654 SDE2Q6IQ49 451 aa11.77□□□□□ -0.52
CLIP1-203ENST00000361654 TRIM67Q6ZTA4 783 aa11.77□□□□□ -0.52
CLIP1-203ENST00000361654 SP8Q8IXZ3 490 aa11.77□□□□□ -0.52
CLIP1-203ENST00000361654 PDCD6IPQ8WUM4 868 aaKnown RBP11.77□□□□□ -0.52
CLIP1-203ENST00000361654 A0A1B0GUA9 196 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 BUB1BO60566 1050 aaPredicted RBP11.77□□□□□ -0.53
CLIP1-203ENST00000361654 ECEL1O95672 775 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 GPC3P51654 580 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 DYNLT1P63172 113 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 IL9RQ01113 521 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 TMEM35BQ8NCS4 154 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 PCDHA6Q9UN73 950 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 PCDHA8Q9Y5H6 950 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 EPN1Q9Y6I3 576 aaPredicted RBP11.77□□□□□ -0.53
CLIP1-203ENST00000361654 GADD45BO75293 160 aaPredicted RBP11.77□□□□□ -0.53
CLIP1-203ENST00000361654 PYGLP06737 847 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.53
CLIP1-203ENST00000361654 TFDP2Q14188 446 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 R3HDM1Q15032 1099 aaKnown RBP11.77□□□□□ -0.53
CLIP1-203ENST00000361654 SLC39A14Q15043 492 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 ZNF699Q32M78 642 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 FBXL13Q8NEE6 735 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 CENPKQ9BS16 269 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 EFHD1Q9BUP0 239 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 PCDHB8Q9UN66 801 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 APBA1Q02410 837 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 EHHADHQ08426 723 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 LRRC41Q15345 812 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 TAF1BQ53T94 588 aaPredicted RBP11.77□□□□□ -0.53
CLIP1-203ENST00000361654 PPP1R18Q6NYC8 613 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 GPT2Q8TD30 523 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 GIPC2Q8TF65 315 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 ZBTB9Q96C00 473 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 CLIC6Q96NY7 704 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 TEX12Q9BXU0 123 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 DRC3Q9H069 523 aa11.77□□□□□ -0.53
CLIP1-203ENST00000361654 EFCAB8A8MWE9 144 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 CACNB3P54284 484 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 CCDC15Q0P6D6 951 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 PROSER3Q2NL68 480 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 TTC19Q6DKK2 380 aaPredicted RBP11.76□□□□□ -0.53
CLIP1-203ENST00000361654 OR6J1Q8NGC5 347 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 FSD1LQ9BXM9 530 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 RABEP2Q9H5N1 569 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 PCDHA7Q9UN72 937 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 MAGED2Q9UNF1 606 aaPredicted RBP11.76□□□□□ -0.53
CLIP1-203ENST00000361654 SLC4A7Q9Y6M7 1214 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 PRKAB2O43741 272 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 SNX2O60749 519 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 ZNF189O75820 626 aaPredicted RBP11.76□□□□□ -0.53
CLIP1-203ENST00000361654 IFNAR1P17181 557 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 PHEXP78562 749 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 TTLL11Q8NHH1 800 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 CFAP61Q8NHU2 1237 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 SRPK1Q96SB4 655 aaKnown RBP11.76□□□□□ -0.53
CLIP1-203ENST00000361654 ASNSD1Q9NWL6 643 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 COL15A1P39059 1388 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 PZPP20742 1482 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 SMIM24O75264 130 aa11.76□□□□□ -0.53
CLIP1-203ENST00000361654 PSMA2P25787 234 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms