RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 ZNF484Q5JVG2 852 aa21.49■■□□□ 1.03
HLA-DRB1-201ENST00000360004 HAUS3Q68CZ6 603 aa21.49■■□□□ 1.03
HLA-DRB1-201ENST00000360004 LXNQ9BS40 222 aa21.49■■□□□ 1.03
HLA-DRB1-201ENST00000360004 ZSWIM4Q9H7M6 989 aa21.49■■□□□ 1.03
HLA-DRB1-201ENST00000360004 STK24Q9Y6E0 443 aa21.49■■□□□ 1.03
HLA-DRB1-201ENST00000360004 VWA3AA6NCI4 1184 aa21.48■■□□□ 1.03
HLA-DRB1-201ENST00000360004 KIAA0355O15063 1070 aa21.48■■□□□ 1.03
HLA-DRB1-201ENST00000360004 TREHO43280 583 aa21.48■■□□□ 1.03
HLA-DRB1-201ENST00000360004 FXR2P51116 673 aaKnown RBP eCLIP21.48■■□□□ 1.03
HLA-DRB1-201ENST00000360004 SPIRE1Q08AE8 756 aa21.48■■□□□ 1.03
HLA-DRB1-201ENST00000360004 PTK7Q13308 1070 aa21.48■■□□□ 1.03
HLA-DRB1-201ENST00000360004 XKR3Q5GH77 459 aa21.48■■□□□ 1.03
HLA-DRB1-201ENST00000360004 RSPH3Q86UC2 560 aa21.48■■□□□ 1.03
HLA-DRB1-201ENST00000360004 C4orf32Q8N8J7 132 aa21.48■■□□□ 1.03
HLA-DRB1-201ENST00000360004 RGL1Q9NZL6 768 aa21.48■■□□□ 1.03
HLA-DRB1-201ENST00000360004 TBX21Q9UL17 535 aa21.48■■□□□ 1.03
HLA-DRB1-201ENST00000360004 ALPK3Q96L96 1907 aa21.48■■□□□ 1.03
HLA-DRB1-201ENST00000360004 COL1A2P08123 1366 aa21.48■■□□□ 1.03
HLA-DRB1-201ENST00000360004 TRIM43BA6NCK2 446 aa21.47■■□□□ 1.03
HLA-DRB1-201ENST00000360004 PKP1Q13835 747 aa21.47■■□□□ 1.03
HLA-DRB1-201ENST00000360004 STK38Q15208 465 aa21.47■■□□□ 1.03
HLA-DRB1-201ENST00000360004 MTERF2Q49AM1 385 aa21.47■■□□□ 1.03
HLA-DRB1-201ENST00000360004 KRT79Q5XKE5 535 aa21.47■■□□□ 1.03
HLA-DRB1-201ENST00000360004 ARL6IP4Q66PJ3 421 aaKnown RBP21.47■■□□□ 1.03
HLA-DRB1-201ENST00000360004 OTUD6AQ7L8S5 288 aa21.47■■□□□ 1.03
HLA-DRB1-201ENST00000360004 CAGE1Q8TC20 777 aa21.47■■□□□ 1.03
HLA-DRB1-201ENST00000360004 TRAPPC12Q8WVT3 735 aa21.47■■□□□ 1.03
HLA-DRB1-201ENST00000360004 TRIM43Q96BQ3 446 aaPredicted RBP21.47■■□□□ 1.03
HLA-DRB1-201ENST00000360004 CLIC4Q9Y696 253 aa21.47■■□□□ 1.03
HLA-DRB1-201ENST00000360004 ZNF862O60290 1169 aa21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 TIMP1P01033 207 aa21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 NCLP19338 710 aaKnown RBP21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 ATP4AP20648 1035 aa21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 CYP2C18P33260 490 aa21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 THPOP40225 353 aa21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 CCT6AP40227 531 aaKnown RBP21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 MDM2Q00987 491 aaPredicted RBP21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 PDIA5Q14554 519 aa21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 ZRSR1Q15695 479 aaKnown RBP21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 TAF2Q6P1X5 1199 aa21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 TMEM199Q8N511 208 aa21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 RASSF8Q8NHQ8 419 aa21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 SNX29Q8TEQ0 813 aa21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 NOC4LQ9BVI4 516 aaKnown RBP21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 FTOQ9C0B1 505 aaKnown RBP eCLIP21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 FAM49AQ9H0Q0 323 aaPredicted RBP21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 ATP6V1DQ9Y5K8 247 aa21.46■■□□□ 1.03
HLA-DRB1-201ENST00000360004 CCL23P55773 120 aa21.45■■□□□ 1.02
HLA-DRB1-201ENST00000360004 TBC1D8BQ0IIM8 1120 aa21.45■■□□□ 1.02
HLA-DRB1-201ENST00000360004 SERINC5Q86VE9 423 aa21.45■■□□□ 1.02
HLA-DRB1-201ENST00000360004 METTL13Q8N6R0 699 aa21.45■■□□□ 1.02
HLA-DRB1-201ENST00000360004 BADQ92934 168 aa21.45■■□□□ 1.02
HLA-DRB1-201ENST00000360004 CDK5RAP3Q96JB5 506 aa21.45■■□□□ 1.02
HLA-DRB1-201ENST00000360004 USP28Q96RU2 1077 aa21.45■■□□□ 1.02
HLA-DRB1-201ENST00000360004 TUFT1Q9NNX1 390 aa21.45■■□□□ 1.02
HLA-DRB1-201ENST00000360004 M0QZ92 97 aa21.44■■□□□ 1.02
HLA-DRB1-201ENST00000360004 KLRC1P26715 233 aa21.44■■□□□ 1.02
HLA-DRB1-201ENST00000360004 MARCKSP29966 332 aaPredicted RBP21.44■■□□□ 1.02
HLA-DRB1-201ENST00000360004 NUCB2P80303 420 aa21.44■■□□□ 1.02
HLA-DRB1-201ENST00000360004 HIC1Q14526 733 aa21.44■■□□□ 1.02
HLA-DRB1-201ENST00000360004 MTHFD1LQ6UB35 978 aa21.44■■□□□ 1.02
HLA-DRB1-201ENST00000360004 C4orf19Q8IY42 314 aa21.44■■□□□ 1.02
HLA-DRB1-201ENST00000360004 CEP170P1Q96L14 293 aa21.44■■□□□ 1.02
HLA-DRB1-201ENST00000360004 TFIP11Q9UBB9 837 aaKnown RBP21.44■■□□□ 1.02
HLA-DRB1-201ENST00000360004 MYH9P35579 1960 aaKnown RBP21.43■■□□□ 1.02
HLA-DRB1-201ENST00000360004 PITPNM1O00562 1244 aa21.43■■□□□ 1.02
HLA-DRB1-201ENST00000360004 MAGEB2O15479 319 aa21.43■■□□□ 1.02
HLA-DRB1-201ENST00000360004 SLITRK3O94933 977 aa21.43■■□□□ 1.02
HLA-DRB1-201ENST00000360004 BRD1O95696 1058 aa21.43■■□□□ 1.02
HLA-DRB1-201ENST00000360004 RPLP2P05387 115 aaKnown RBP21.43■■□□□ 1.02
HLA-DRB1-201ENST00000360004 TMOD1P28289 359 aa21.43■■□□□ 1.02
HLA-DRB1-201ENST00000360004 HOXC8P31273 242 aa21.43■■□□□ 1.02
HLA-DRB1-201ENST00000360004 YWHABP31946 246 aaKnown RBP21.43■■□□□ 1.02
HLA-DRB1-201ENST00000360004 FPGSQ05932 587 aa21.43■■□□□ 1.02
HLA-DRB1-201ENST00000360004 XKR9Q5GH70 373 aa21.43■■□□□ 1.02
HLA-DRB1-201ENST00000360004 PLA2G4FQ68DD2 849 aa21.43■■□□□ 1.02
HLA-DRB1-201ENST00000360004 POLR3CQ9BUI4 534 aaPredicted RBP21.43■■□□□ 1.02
HLA-DRB1-201ENST00000360004 CFAP45Q9UL16 551 aa21.43■■□□□ 1.02
HLA-DRB1-201ENST00000360004 TMEM150BA6NC51 233 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 CTSHP09668 335 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 SELPP16109 830 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 MAGEA10P43363 369 aaPredicted RBP21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 UMODL1Q5DID0 1318 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 MFSD5Q6N075 450 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 RUFY4Q6ZNE9 571 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 LRRC8DQ7L1W4 858 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 IGSF22Q8N9C0 903 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 DNAJB3Q8WWF6 145 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 ZBTB10Q96DT7 871 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 MAP7D2Q96T17 732 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 HSD17B14Q9BPX1 270 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 JPH2Q9BR39 696 aaPredicted RBP21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 SH2D3AQ9BRG2 576 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 SUGCTQ9HAC7 445 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 PCDH10Q9P2E7 1040 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 PCDHA2Q9Y5H9 948 aa21.42■■□□□ 1.02
HLA-DRB1-201ENST00000360004 KAT6AQ92794 2004 aa21.41■■□□□ 1.02
HLA-DRB1-201ENST00000360004 MKI67P46013 3256 aaKnown RBP21.41■■□□□ 1.02
HLA-DRB1-201ENST00000360004 KDM3AQ9Y4C1 1321 aa21.41■■□□□ 1.02
HLA-DRB1-201ENST00000360004 MBLAC1A4D2B0 266 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms