RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 METTL13Q8N6R0 699 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 GLG1Q92896 1179 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 CXorf56Q9H5V9 222 aa7.16□□□□□ -1.26
CSDE1-203ENST00000358528 MMEP08473 750 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 PDHBP11177 359 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 TRIP13Q15645 432 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-203ENST00000358528 ZYXQ15942 572 aaKnown RBP7.15□□□□□ -1.26
CSDE1-203ENST00000358528 GRIPAP1Q4V328 841 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 FIGNQ5HY92 759 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 KDM7AQ6ZMT4 941 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 SPICE1Q8N0Z3 855 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 CCDC197Q8NCU1 140 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 HVCN1Q96D96 273 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 RAB17Q9H0T7 212 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 PCIF1Q9H4Z3 704 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 SLC40A1Q9NP59 571 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 ASIC3Q9UHC3 531 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 COL5A2P05997 1499 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-203ENST00000358528 KDM3AQ9Y4C1 1321 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 CFBP00751 764 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 TRIM49P0CI25 452 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 TRIM49CP0CI26 452 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 UCHL3P15374 230 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 DR1Q01658 176 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 CALCOCO2Q13137 446 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 PSMD2Q13200 908 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 NBPF9Q3BBW0 867 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 CAPN12Q6ZSI9 719 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 ADGRF4Q8IZF3 695 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 SYCE1Q8N0S2 351 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 CCDC63Q8NA47 563 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 BAP1Q92560 729 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 PBKQ96KB5 322 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.15□□□□□ -1.26
CSDE1-203ENST00000358528 AZI2Q9H6S1 392 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 USP40Q9NVE5 1235 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 SWAP70Q9UH65 585 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 TBK1Q9UHD2 729 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 GGA1Q9UJY5 639 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 FRMD4BQ9Y2L6 1034 aa7.15□□□□□ -1.26
CSDE1-203ENST00000358528 A0A1W2PRG0 241 aa7.15□□□□□ -1.27
CSDE1-203ENST00000358528 NEBLO76041 1014 aa7.15□□□□□ -1.27
CSDE1-203ENST00000358528 FAM107AO95990 144 aa7.15□□□□□ -1.27
CSDE1-203ENST00000358528 PRLRP16471 622 aa7.15□□□□□ -1.27
CSDE1-203ENST00000358528 TAL1P17542 331 aaPredicted RBP7.15□□□□□ -1.27
CSDE1-203ENST00000358528 CUL1Q13616 776 aa7.15□□□□□ -1.27
CSDE1-203ENST00000358528 CTTNQ14247 550 aaKnown RBP7.15□□□□□ -1.27
CSDE1-203ENST00000358528 DOK7Q18PE1 504 aa7.15□□□□□ -1.27
CSDE1-203ENST00000358528 SEL1L2Q5TEA6 688 aa7.15□□□□□ -1.27
CSDE1-203ENST00000358528 ZNF571Q7Z3V5 609 aaPredicted RBP7.15□□□□□ -1.27
CSDE1-203ENST00000358528 CCDC50Q8IVM0 306 aa7.15□□□□□ -1.27
CSDE1-203ENST00000358528 GDAP1Q8TB36 358 aa7.15□□□□□ -1.27
CSDE1-203ENST00000358528 CAVIN3Q969G5 261 aa7.15□□□□□ -1.27
CSDE1-203ENST00000358528 SEC16BQ96JE7 1060 aa7.15□□□□□ -1.27
CSDE1-203ENST00000358528 PSMD1Q99460 953 aa7.15□□□□□ -1.27
CSDE1-203ENST00000358528 SPZ1Q9BXG8 430 aa7.15□□□□□ -1.27
CSDE1-203ENST00000358528 NSRP1Q9H0G5 558 aaKnown RBP7.15□□□□□ -1.27
CSDE1-203ENST00000358528 CCNL1Q9UK58 526 aaPredicted RBP7.15□□□□□ -1.27
CSDE1-203ENST00000358528 FLT1P17948 1338 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 MARF1Q9Y4F3 1742 aaKnown RBP7.14□□□□□ -1.27
CSDE1-203ENST00000358528 SPEF2Q9C093 1822 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 TLR2O60603 784 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 ACSL3O95573 720 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 MYBP10242 640 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 CASP4P49662 377 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 CDK17Q00537 523 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 SLC35G1Q2M3R5 365 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 FAM186BQ8IYM0 893 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 PROM2Q8N271 834 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 VEZTQ9HBM0 779 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 OSGEPQ9NPF4 335 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 GRIN2DO15399 1336 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 C4AP0C0L4 1744 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 C4BP0C0L5 1744 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 KIF1AQ12756 1690 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 RSPH10B2B2RC85 870 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 RSPH10BP0C881 870 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 FGFR4P22455 802 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 FLT3P36888 993 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 GALCP54803 685 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 CETN1Q12798 172 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 NEDD9Q14511 834 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 MEI1Q5TIA1 1274 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 NEDD1Q8NHV4 660 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 RAPGEF5Q92565 580 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 NGLY1Q96IV0 654 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 RGL1Q9NZL6 768 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 NR3C1P04150 777 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 PEX19P40855 299 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 SF3B3Q15393 1217 aaKnown RBP7.14□□□□□ -1.27
CSDE1-203ENST00000358528 SEPT7Q16181 437 aaKnown RBP7.14□□□□□ -1.27
CSDE1-203ENST00000358528 ECM1Q16610 540 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 NSMFQ6X4W1 530 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 LRRC55Q6ZSA7 311 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 PARP9Q8IXQ6 854 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 SH3GL2Q99962 352 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 ZC3H12CQ9C0D7 883 aaKnown RBP7.14□□□□□ -1.27
CSDE1-203ENST00000358528 ISCUQ9H1K1 167 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 TMBIM4Q9HC24 238 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 SLC24A3Q9HC58 644 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms