RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 PCIF1Q9H4Z3 704 aa19.46■□□□□ 0.71
NPAS3-202ENST00000356141 ZNF214Q9UL59 606 aaPredicted RBP19.46■□□□□ 0.71
NPAS3-202ENST00000356141 SYNPO2Q9UMS6 1093 aa19.46■□□□□ 0.71
NPAS3-202ENST00000356141 SNCAIPQ9Y6H5 919 aa19.46■□□□□ 0.71
NPAS3-202ENST00000356141 ZSCAN12O43309 604 aa19.45■□□□□ 0.7
NPAS3-202ENST00000356141 ETF1P62495 437 aaKnown RBP19.45■□□□□ 0.7
NPAS3-202ENST00000356141 FAM114A1Q8IWE2 563 aa19.45■□□□□ 0.7
NPAS3-202ENST00000356141 ELMO3Q96BJ8 720 aa19.45■□□□□ 0.7
NPAS3-202ENST00000356141 COL4A3BPQ9Y5P4 624 aa19.45■□□□□ 0.7
NPAS3-202ENST00000356141 DUSP10Q9Y6W6 482 aa19.45■□□□□ 0.7
NPAS3-202ENST00000356141 FKBP3Q00688 224 aaKnown RBP19.45■□□□□ 0.7
NPAS3-202ENST00000356141 ZNF569Q5MCW4 686 aa19.45■□□□□ 0.7
NPAS3-202ENST00000356141 MCF2L2Q86YR7 1114 aa19.45■□□□□ 0.7
NPAS3-202ENST00000356141 KCTD10Q9H3F6 313 aa19.45■□□□□ 0.7
NPAS3-202ENST00000356141 AGO4Q9HCK5 861 aaKnown RBP19.45■□□□□ 0.7
NPAS3-202ENST00000356141 SPDYE16A6NNV3 312 aaPredicted RBP19.44■□□□□ 0.7
NPAS3-202ENST00000356141 CCNE2O96020 404 aa19.44■□□□□ 0.7
NPAS3-202ENST00000356141 PNMA6AP0CW24 399 aaPredicted RBP19.44■□□□□ 0.7
NPAS3-202ENST00000356141 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.44■□□□□ 0.7
NPAS3-202ENST00000356141 A1CFQ9NQ94 594 aaKnown RBP19.44■□□□□ 0.7
NPAS3-202ENST00000356141 DHX15O43143 795 aaKnown RBP19.44■□□□□ 0.7
NPAS3-202ENST00000356141 HIP1RO75146 1068 aa19.44■□□□□ 0.7
NPAS3-202ENST00000356141 NR3C2P08235 984 aa19.44■□□□□ 0.7
NPAS3-202ENST00000356141 PPP2R5CQ13362 524 aa19.44■□□□□ 0.7
NPAS3-202ENST00000356141 TSR1Q2NL82 804 aaKnown RBP19.44■□□□□ 0.7
NPAS3-202ENST00000356141 ARHGAP29Q52LW3 1261 aa19.44■□□□□ 0.7
NPAS3-202ENST00000356141 SEPT14Q6ZU15 432 aa19.44■□□□□ 0.7
NPAS3-202ENST00000356141 NCAPG2Q86XI2 1143 aa19.44■□□□□ 0.7
NPAS3-202ENST00000356141 ANKRD13CQ8N6S4 541 aa19.44■□□□□ 0.7
NPAS3-202ENST00000356141 OR8K1Q8NGG5 319 aa19.44■□□□□ 0.7
NPAS3-202ENST00000356141 PLA2G6O60733 806 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 DSG3P32926 999 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 TRAF1Q13077 416 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 GPR162Q16538 588 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 SUPT20HL1Q3ZLR7 823 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 ZCWPW2Q504Y3 356 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 ZSWIM2Q8NEG5 633 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 FAM84AQ96KN4 292 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 POLR3CQ9BUI4 534 aaPredicted RBP19.43■□□□□ 0.7
NPAS3-202ENST00000356141 CLEC11AQ9Y240 323 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 AFG3L2Q9Y4W6 797 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 CSADQ9Y600 493 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 ENC1O14682 589 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 C1orf186Q6ZWK4 172 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 ANKRD35Q8N283 1001 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 LSM14BQ9BX40 385 aaKnown RBP19.43■□□□□ 0.7
NPAS3-202ENST00000356141 ZNF112Q9UJU3 913 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 PAXBP1Q9Y5B6 917 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.43■□□□□ 0.7
NPAS3-202ENST00000356141 LRRC53A6NM62 1247 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 AKAP3O75969 853 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 LRRC63Q05C16 580 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 PSMD2Q13200 908 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 ELF2Q15723 593 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 MAN2A1Q16706 1144 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 MCTP2Q6DN12 878 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 PADI6Q6TGC4 694 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 FAM178BQ8IXR5 827 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 DRC1Q96MC2 740 aa19.43■□□□□ 0.7
NPAS3-202ENST00000356141 PGK2P07205 417 aa19.42■□□□□ 0.7
NPAS3-202ENST00000356141 GJB7Q6PEY0 223 aa19.42■□□□□ 0.7
NPAS3-202ENST00000356141 CYP26C1Q6V0L0 522 aa19.42■□□□□ 0.7
NPAS3-202ENST00000356141 CACNA2D4Q7Z3S7 1137 aa19.42■□□□□ 0.7
NPAS3-202ENST00000356141 BTBD7Q9P203 1132 aa19.42■□□□□ 0.7
NPAS3-202ENST00000356141 REXO2Q9Y3B8 237 aaKnown RBP19.42■□□□□ 0.7
NPAS3-202ENST00000356141 ITIH6Q6UXX5 1313 aa19.42■□□□□ 0.7
NPAS3-202ENST00000356141 ZSCAN20P17040 1043 aaPredicted RBP19.42■□□□□ 0.7
NPAS3-202ENST00000356141 CASQ1P31415 396 aa19.42■□□□□ 0.7
NPAS3-202ENST00000356141 POLR2FP61218 127 aaKnown RBP19.42■□□□□ 0.7
NPAS3-202ENST00000356141 KCNMA1Q12791 1236 aa19.42■□□□□ 0.7
NPAS3-202ENST00000356141 KNOP1Q1ED39 458 aaKnown RBP19.42■□□□□ 0.7
NPAS3-202ENST00000356141 CATSPERGQ6ZRH7 1159 aa19.42■□□□□ 0.7
NPAS3-202ENST00000356141 CARD6Q9BX69 1037 aa19.42■□□□□ 0.7
NPAS3-202ENST00000356141 JADE2Q9NQC1 790 aa19.42■□□□□ 0.7
NPAS3-202ENST00000356141 ADARB2Q9NS39 739 aaKnown RBP19.42■□□□□ 0.7
NPAS3-202ENST00000356141 MACROD2A1Z1Q3 448 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 RCCD1A6NED2 376 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 BACH1O14867 736 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 SETQ01105 290 aaPredicted RBP19.41■□□□□ 0.7
NPAS3-202ENST00000356141 ERCC6LQ2NKX8 1250 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 PARVGQ9HBI0 331 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 CAPN11Q9UMQ6 739 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 EPN1Q9Y6I3 576 aaPredicted RBP19.41■□□□□ 0.7
NPAS3-202ENST00000356141 PPP1R12BO60237 982 aaPredicted RBP19.41■□□□□ 0.7
NPAS3-202ENST00000356141 SLC9A1P19634 815 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 MAP3K9P80192 1104 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 EPHA7Q15375 998 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 TDRD12Q587J7 1177 aaKnown RBP19.41■□□□□ 0.7
NPAS3-202ENST00000356141 XKR9Q5GH70 373 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 FAM102BQ5T8I3 360 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 PCNX4Q63HM2 1172 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 SYCP3Q8IZU3 236 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 SLC35F6Q8N357 371 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 NACC1Q96RE7 527 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 UBIAD1Q9Y5Z9 338 aa19.41■□□□□ 0.7
NPAS3-202ENST00000356141 ASTN1O14525 1302 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 COL11A1P12107 1806 aaPredicted RBP19.4■□□□□ 0.7
NPAS3-202ENST00000356141 K7ENM7 598 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 DYNC1I1O14576 645 aa19.4■□□□□ 0.7
NPAS3-202ENST00000356141 RGS20O76081 388 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms