RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 ATP2C2O75185 946 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 QARSP47897 775 aaKnown RBP12.16□□□□□ -0.46
FN1-204ENST00000356005 KIAA1755Q5JYT7 1200 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 CEP57Q86XR8 500 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 OSBPL5Q9H0X9 879 aaPredicted RBP12.16□□□□□ -0.46
FN1-204ENST00000356005 A0A1W2PQ27 194 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 A0A1W2PQ64 194 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 A0A1W2PQD8 194 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 PRAMEF22A3QJZ6 481 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 RALAP11233 206 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 ANKRD20A3Q5VUR7 823 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 CACNA2D3Q8IZS8 1091 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 AFG1LQ8WV93 481 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 P2RX5Q93086 422 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 CHRNA5P30532 468 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 OSTNP61366 133 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 MXD4Q14582 209 aaPredicted RBP12.16□□□□□ -0.46
FN1-204ENST00000356005 ZNF699Q32M78 642 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 RHPN2Q8IUC4 686 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 MCUR1Q96AQ8 359 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 CEP95Q96GE4 821 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 MAD1L1Q9Y6D9 718 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 USP31Q70CQ4 1352 aa12.16□□□□□ -0.46
FN1-204ENST00000356005 MAGEB2O15479 319 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 INHBAP08476 426 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 CAPN2P17655 700 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 GPC3P51654 580 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 SLC39A14Q15043 492 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 ARHGEF18Q6ZSZ5 1173 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 ACAP3Q96P50 834 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.15□□□□□ -0.46
FN1-204ENST00000356005 MAGEB5Q9BZ81 275 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 JPH1Q9HDC5 661 aaPredicted RBP12.15□□□□□ -0.46
FN1-204ENST00000356005 JRKLQ9Y4A0 524 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 HYOU1Q9Y4L1 999 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 CNTNAP4Q9C0A0 1308 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 GTF2F1P35269 517 aaKnown RBP eCLIP12.15□□□□□ -0.464e-10■■■■□ 25.6
FN1-204ENST00000356005 DDIT3P35638 169 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 AP3M2P53677 418 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 RAD51Q06609 339 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 SCN4BQ8IWT1 228 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 SH3TC2Q8TF17 1288 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 ZC3H15Q8WU90 426 aaKnown RBP12.15□□□□□ -0.46
FN1-204ENST00000356005 PUS7LQ9H0K6 701 aaKnown RBP12.15□□□□□ -0.46
FN1-204ENST00000356005 HUNKP57058 714 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 CCDC15Q0P6D6 951 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 GPRC5AQ8NFJ5 357 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 ZNF560Q96MR9 790 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 SCINQ9Y6U3 715 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 F5H6K3 240 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 RGS16O15492 202 aaPredicted RBP12.15□□□□□ -0.46
FN1-204ENST00000356005 KLRC3Q07444 240 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 KLHL7Q8IXQ5 586 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 ZNF653Q96CK0 615 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 HDAC11Q96DB2 347 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 LSG1Q9H089 658 aaKnown RBP12.15□□□□□ -0.46
FN1-204ENST00000356005 SMARCAD1Q9H4L7 1026 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 ELP3Q9H9T3 547 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 HPDP32754 393 aaPredicted RBP12.15□□□□□ -0.46
FN1-204ENST00000356005 EFNA5P52803 228 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 AGBL3Q8NEM8 1001 aa12.15□□□□□ -0.46
FN1-204ENST00000356005 ADARB2Q9NS39 739 aaKnown RBP12.15□□□□□ -0.46
FN1-204ENST00000356005 CELF2O95319 508 aaKnown RBP12.15□□□□□ -0.47
FN1-204ENST00000356005 CPP00450 1065 aa12.15□□□□□ -0.47
FN1-204ENST00000356005 RAB42Q8N4Z0 105 aa12.15□□□□□ -0.47
FN1-204ENST00000356005 ARRDC4Q8NCT1 418 aa12.15□□□□□ -0.47
FN1-204ENST00000356005 STRBPQ96SI9 672 aaKnown RBP12.15□□□□□ -0.47
FN1-204ENST00000356005 SEMA3FQ13275 785 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 PROM2Q8N271 834 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 MYOZ2Q9NPC6 264 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 VPS18Q9P253 973 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 SRPRBQ9Y5M8 271 aaKnown RBP12.14□□□□□ -0.47
FN1-204ENST00000356005 USP11P51784 963 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 SFSWAPQ12872 951 aaKnown RBP12.14□□□□□ -0.47
FN1-204ENST00000356005 TRIM42Q8IWZ5 723 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 ATP6V1E2Q96A05 226 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 EMILIN3Q9NT22 766 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 PCDHB7Q9Y5E2 793 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 STK36Q9NRP7 1315 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 CYBBP04839 570 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 CACNB3P54284 484 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 TMTC4Q5T4D3 741 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 RPUSD2Q8IZ73 545 aaKnown RBP12.14□□□□□ -0.47
FN1-204ENST00000356005 ERO1AQ96HE7 468 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 UBE2TQ9NPD8 197 aaPredicted RBP12.14□□□□□ -0.47
FN1-204ENST00000356005 DDX5P17844 614 aaKnown RBP12.14□□□□□ -0.47
FN1-204ENST00000356005 CCL15-CCL14A0A0B4J2E2 113 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 HSPA6P17066 643 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 SCARF1Q14162 830 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 CCL15Q16663 113 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 GDAP1Q8TB36 358 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 SLC26A4O43511 780 aa12.14□□□□□ -0.47
FN1-204ENST00000356005 RBBP5Q15291 538 aaKnown RBP12.14□□□□□ -0.47
FN1-204ENST00000356005 TRMT44Q8IYL2 757 aaKnown RBP12.14□□□□□ -0.47
FN1-204ENST00000356005 TADA2AO75478 443 aa12.13□□□□□ -0.47
FN1-204ENST00000356005 KRT17Q04695 432 aa12.13□□□□□ -0.47
FN1-204ENST00000356005 MTMR2Q13614 643 aa12.13□□□□□ -0.47
FN1-204ENST00000356005 UBE2SQ16763 222 aa12.13□□□□□ -0.47
FN1-204ENST00000356005 NXNQ6DKJ4 435 aa12.13□□□□□ -0.47
FN1-204ENST00000356005 RWDD4Q6NW29 188 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms