RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SPATA31C2B4DYI2 1134 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 PROB1E7EW31 1015 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 SCG2P13521 617 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 TCF7P36402 384 aaPredicted RBP12.9□□□□□ -0.34
RTN3-204ENST00000354497 MRPS9P82933 396 aaKnown RBP12.9□□□□□ -0.34
RTN3-204ENST00000354497 TMEM62Q0P6H9 643 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 GRIK4Q16099 956 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 IFIT1BQ5T764 474 aaKnown RBP12.9□□□□□ -0.34
RTN3-204ENST00000354497 FRMD5Q7Z6J6 570 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 THNSL1Q8IYQ7 743 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 KREMEN2Q8NCW0 462 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 RILPL2Q969X0 211 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 ZBTB10Q96DT7 871 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 PIGSQ96S52 555 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 PCDHB12Q9Y5F1 795 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 KIAA1671Q9BY89 1806 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 MYH6P13533 1939 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 PLXNA3P51805 1871 aa12.9□□□□□ -0.34
RTN3-204ENST00000354497 TTLL13PA6NNM8 815 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 M0QZ92 97 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 MFAP1P55081 439 aaKnown RBP12.89□□□□□ -0.35
RTN3-204ENST00000354497 PAK2Q13177 524 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 SEMA3FQ13275 785 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 DUSP6Q16828 381 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 ANKRD45Q5TZF3 282 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 PLPP4Q5VZY2 271 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 ERMP1Q7Z2K6 904 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 RTN4RL1Q86UN2 441 aaPredicted RBP12.89□□□□□ -0.35
RTN3-204ENST00000354497 SAMD3Q8N6K7 520 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 TMEM105Q8N8V8 129 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 PIBF1Q8WXW3 757 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 SUSD6Q92537 303 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 GLG1Q92896 1179 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 NKD2Q969F2 451 aaPredicted RBP12.89□□□□□ -0.35
RTN3-204ENST00000354497 INPP4AQ96PE3 977 aaPredicted RBP12.89□□□□□ -0.35
RTN3-204ENST00000354497 FTHL17Q9BXU8 183 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 MFSD1Q9H3U5 465 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 AAASQ9NRG9 546 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 CFAP54Q96N23 3096 aa12.89□□□□□ -0.35
RTN3-204ENST00000354497 TBKBP1A7MCY6 615 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 STAM2O75886 525 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 CLCN1P35523 988 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 NBL1P41271 181 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 APOBRQ0VD83 1088 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 TRAF1Q13077 416 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 MTMR3Q13615 1198 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 ANKRD54Q6NXT1 300 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 ADSSL1Q8N142 457 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 CDCA3Q99618 268 aaPredicted RBP12.88□□□□□ -0.35
RTN3-204ENST00000354497 TMEM260Q9NX78 707 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 PKD2L1Q9P0L9 805 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 ZSWIM5Q9P217 1185 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 NR2E1Q9Y466 385 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 TRPV2Q9Y5S1 764 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 SALL3Q9BXA9 1300 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 FSD2A1L4K1 749 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 FGF18O76093 207 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 ERVFC1P60507 584 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 UBE3AQ05086 875 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 IER5Q5VY09 327 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 NLRX1Q86UT6 975 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 ATP8B4Q8TF62 1192 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 SMOC2Q9H3U7 446 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 ENTPD7Q9NQZ7 604 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 ERAP1Q9NZ08 941 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 MAD2L2Q9UI95 211 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 PADI3Q9ULW8 664 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 SORCS3Q9UPU3 1222 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 PCDHB7Q9Y5E2 793 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 PCDHB15Q9Y5E8 787 aa12.88□□□□□ -0.35
RTN3-204ENST00000354497 DOCK5Q9H7D0 1870 aa12.87□□□□□ -0.35
RTN3-204ENST00000354497 BRD1O95696 1058 aa12.87□□□□□ -0.35
RTN3-204ENST00000354497 CA8P35219 290 aa12.87□□□□□ -0.35
RTN3-204ENST00000354497 NT5C2P49902 561 aa12.87□□□□□ -0.35
RTN3-204ENST00000354497 PDE1AP54750 535 aa12.87□□□□□ -0.35
RTN3-204ENST00000354497 NFX1Q12986 1120 aaKnown RBP12.87□□□□□ -0.35
RTN3-204ENST00000354497 TMEM266Q2M3C6 531 aa12.87□□□□□ -0.35
RTN3-204ENST00000354497 UBALD2Q8IYN6 164 aa12.87□□□□□ -0.35
RTN3-204ENST00000354497 SMARCC2Q8TAQ2 1214 aa12.87□□□□□ -0.35
RTN3-204ENST00000354497 MTMR8Q96EF0 704 aa12.87□□□□□ -0.35
RTN3-204ENST00000354497 MAP7D2Q96T17 732 aa12.87□□□□□ -0.35
RTN3-204ENST00000354497 KRT23Q9C075 422 aa12.87□□□□□ -0.35
RTN3-204ENST00000354497 S1PR5Q9H228 398 aa12.87□□□□□ -0.35
RTN3-204ENST00000354497 HCSTQ9UBK5 93 aa12.87□□□□□ -0.35
RTN3-204ENST00000354497 CDH22Q9UJ99 828 aa12.87□□□□□ -0.35
RTN3-204ENST00000354497 PLXNA4Q9HCM2 1894 aa12.86□□□□□ -0.35
RTN3-204ENST00000354497 ZDBF2Q9HCK1 2354 aa12.86□□□□□ -0.35
RTN3-204ENST00000354497 RIOK3O14730 519 aaKnown RBP12.86□□□□□ -0.35
RTN3-204ENST00000354497 TPM2P07951 284 aa12.86□□□□□ -0.35
RTN3-204ENST00000354497 IMMTQ16891 758 aaKnown RBP12.86□□□□□ -0.35
RTN3-204ENST00000354497 MARCH8Q5T0T0 291 aa12.86□□□□□ -0.35
RTN3-204ENST00000354497 MCTP2Q6DN12 878 aa12.86□□□□□ -0.35
RTN3-204ENST00000354497 COLGALT1Q8NBJ5 622 aa12.86□□□□□ -0.35
RTN3-204ENST00000354497 GIMAP8Q8ND71 665 aaPredicted RBP12.86□□□□□ -0.35
RTN3-204ENST00000354497 FLCNQ8NFG4 579 aa12.86□□□□□ -0.35
RTN3-204ENST00000354497 IPO4Q8TEX9 1081 aaKnown RBP12.86□□□□□ -0.35
RTN3-204ENST00000354497 SEPT1Q8WYJ6 367 aa12.86□□□□□ -0.35
RTN3-204ENST00000354497 CUL5Q93034 780 aa12.86□□□□□ -0.35
RTN3-204ENST00000354497 TCF25Q9BQ70 676 aa12.86□□□□□ -0.35
RTN3-204ENST00000354497 GINS2Q9Y248 185 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms